RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 PLEKHF2Q9H8W4 249 aa6.95□□□□□ -1.3
SPTLC1-205ENST00000477888 ZNF304Q9HCX3 659 aa6.95□□□□□ -1.3
SPTLC1-205ENST00000477888 ANKRD10Q9NXR5 420 aa6.95□□□□□ -1.3
SPTLC1-205ENST00000477888 CRIM1Q9NZV1 1036 aa6.95□□□□□ -1.3
SPTLC1-205ENST00000477888 KLHL20Q9Y2M5 609 aa6.95□□□□□ -1.3
SPTLC1-205ENST00000477888 ZANQ9Y493 2812 aa6.95□□□□□ -1.3
SPTLC1-205ENST00000477888 HRNRQ86YZ3 2850 aaPredicted RBP6.94□□□□□ -1.3
SPTLC1-205ENST00000477888 GOLGA6L4A6NEF3 574 aa6.94□□□□□ -1.3
SPTLC1-205ENST00000477888 H7C1Q1 480 aa6.94□□□□□ -1.3
SPTLC1-205ENST00000477888 IFRD1O00458 451 aaPredicted RBP6.94□□□□□ -1.3
SPTLC1-205ENST00000477888 NEURL1O76050 574 aa6.94□□□□□ -1.3
SPTLC1-205ENST00000477888 NDST3O95803 873 aa6.94□□□□□ -1.3
SPTLC1-205ENST00000477888 F12P00748 615 aaPredicted RBP6.94□□□□□ -1.3
SPTLC1-205ENST00000477888 SP1P08047 785 aa6.94□□□□□ -1.3
SPTLC1-205ENST00000477888 ZNF24P17028 368 aa6.94□□□□□ -1.3
SPTLC1-205ENST00000477888 AKT1P31749 480 aa6.94□□□□□ -1.3
SPTLC1-205ENST00000477888 GRIA3P42263 894 aa6.94□□□□□ -1.3
SPTLC1-205ENST00000477888 PRLHRP49683 370 aa6.94□□□□□ -1.3
SPTLC1-205ENST00000477888 ST13P50502 369 aaKnown RBP6.94□□□□□ -1.3
SPTLC1-205ENST00000477888 NUP107P57740 925 aa6.94□□□□□ -1.3
SPTLC1-205ENST00000477888 IFI35P80217 286 aaPredicted RBP6.94□□□□□ -1.3
SPTLC1-205ENST00000477888 SLC10A2Q12908 348 aaPredicted RBP6.94□□□□□ -1.3
SPTLC1-205ENST00000477888 ZBTB17Q13105 803 aa6.94□□□□□ -1.3
SPTLC1-205ENST00000477888 DAZAP2Q15038 168 aaPredicted RBP6.94□□□□□ -1.3
SPTLC1-205ENST00000477888 PCSK7Q16549 785 aa6.94□□□□□ -1.3
SPTLC1-205ENST00000477888 CCDC183Q5T5S1 534 aa6.94□□□□□ -1.3
SPTLC1-205ENST00000477888 FCRLBQ6BAA4 426 aa6.94□□□□□ -1.3
SPTLC1-205ENST00000477888 DESI1Q6ICB0 168 aa6.94□□□□□ -1.3
SPTLC1-205ENST00000477888 SLC25A25Q6KCM7 469 aa6.94□□□□□ -1.3
SPTLC1-205ENST00000477888 PRMT9Q6P2P2 845 aa6.94□□□□□ -1.3
SPTLC1-205ENST00000477888 TMEM205Q6UW68 189 aa6.94□□□□□ -1.3
SPTLC1-205ENST00000477888 ARHGEF18Q6ZSZ5 1173 aa6.94□□□□□ -1.3
SPTLC1-205ENST00000477888 CXorf67Q86X51 503 aaPredicted RBP6.94□□□□□ -1.3
SPTLC1-205ENST00000477888 ANKMY2Q8IV38 441 aa6.94□□□□□ -1.3
SPTLC1-205ENST00000477888 TMEM178AQ8NBL3 297 aa6.94□□□□□ -1.3
SPTLC1-205ENST00000477888 ZNF354BQ96LW1 612 aa6.94□□□□□ -1.3
SPTLC1-205ENST00000477888 NPAS2Q99743 824 aa6.94□□□□□ -1.3
SPTLC1-205ENST00000477888 OLFM1Q99784 485 aa6.94□□□□□ -1.3
SPTLC1-205ENST00000477888 UTP23Q9BRU9 249 aaKnown RBP6.94□□□□□ -1.3
SPTLC1-205ENST00000477888 TUBB6Q9BUF5 446 aa6.94□□□□□ -1.3
SPTLC1-205ENST00000477888 TP63Q9H3D4 680 aaPredicted RBP6.94□□□□□ -1.3
SPTLC1-205ENST00000477888 TRABDQ9H4I3 376 aa6.94□□□□□ -1.3
SPTLC1-205ENST00000477888 COG4Q9H9E3 785 aa6.94□□□□□ -1.3
SPTLC1-205ENST00000477888 BEX4Q9NWD9 120 aaPredicted RBP6.94□□□□□ -1.3
SPTLC1-205ENST00000477888 TRPS1Q9UHF7 1281 aa6.94□□□□□ -1.3
SPTLC1-205ENST00000477888 GNPTGQ9UJJ9 305 aa6.94□□□□□ -1.3
SPTLC1-205ENST00000477888 ATP6V1DQ9Y5K8 247 aa6.94□□□□□ -1.3
SPTLC1-205ENST00000477888 HCFC1P51610 2035 aa6.93□□□□□ -1.3
SPTLC1-205ENST00000477888 LOC285095A0A1B0GVY8 99 aa6.93□□□□□ -1.3
SPTLC1-205ENST00000477888 HYKKA2RU49 373 aa6.93□□□□□ -1.3
SPTLC1-205ENST00000477888 USP27XA6NNY8 438 aa6.93□□□□□ -1.3
SPTLC1-205ENST00000477888 AGAP14A8MT82 685 aa6.93□□□□□ -1.3
SPTLC1-205ENST00000477888 ISM1B1AKI9 464 aa6.93□□□□□ -1.3
SPTLC1-205ENST00000477888 MAN1A2O60476 641 aa6.93□□□□□ -1.3
SPTLC1-205ENST00000477888 SRPX2O60687 465 aaPredicted RBP6.93□□□□□ -1.3
SPTLC1-205ENST00000477888 CD53P19397 219 aa6.93□□□□□ -1.3
SPTLC1-205ENST00000477888 MX2P20592 715 aa6.93□□□□□ -1.3
SPTLC1-205ENST00000477888 EFNA3P52797 238 aa6.93□□□□□ -1.3
SPTLC1-205ENST00000477888 DCAF7P61962 342 aa6.93□□□□□ -1.3
SPTLC1-205ENST00000477888 GBE1Q04446 702 aa6.93□□□□□ -1.3
SPTLC1-205ENST00000477888 RPA4Q13156 261 aa6.93□□□□□ -1.3
SPTLC1-205ENST00000477888 FASTKQ14296 549 aaKnown RBP6.93□□□□□ -1.3
SPTLC1-205ENST00000477888 KIR2DS3Q14952 304 aa6.93□□□□□ -1.3
SPTLC1-205ENST00000477888 NOMO1Q15155 1222 aa6.93□□□□□ -1.3
SPTLC1-205ENST00000477888 PCBP2Q15366 365 aaKnown RBP eCLIP6.93□□□□□ -1.3
SPTLC1-205ENST00000477888 SYCP1Q15431 976 aa6.93□□□□□ -1.3
SPTLC1-205ENST00000477888 SLC14A2Q15849 920 aa6.93□□□□□ -1.3
SPTLC1-205ENST00000477888 HSP90AA4PQ58FG1 418 aa6.93□□□□□ -1.3
SPTLC1-205ENST00000477888 ZC3H12BQ5HYM0 836 aaKnown RBP6.93□□□□□ -1.3
SPTLC1-205ENST00000477888 WASHC2DQ5SRD0 308 aa6.93□□□□□ -1.3
SPTLC1-205ENST00000477888 PLAG1Q6DJT9 500 aa6.93□□□□□ -1.3
SPTLC1-205ENST00000477888 CCDC70Q6NSX1 233 aa6.93□□□□□ -1.3
SPTLC1-205ENST00000477888 C16orf47Q6ZP98 133 aaPredicted RBP6.93□□□□□ -1.3
SPTLC1-205ENST00000477888 ACAD11Q709F0 780 aa6.93□□□□□ -1.3
SPTLC1-205ENST00000477888 LIX1LQ8IVB5 337 aa6.93□□□□□ -1.3
SPTLC1-205ENST00000477888 TTC29Q8NA56 475 aaPredicted RBP6.93□□□□□ -1.3
SPTLC1-205ENST00000477888 FAM98AQ8NCA5 519 aaKnown RBP6.93□□□□□ -1.3
SPTLC1-205ENST00000477888 ARMC2Q8NEN0 867 aa6.93□□□□□ -1.3
SPTLC1-205ENST00000477888 OR5AR1Q8NGP9 310 aa6.93□□□□□ -1.3
SPTLC1-205ENST00000477888 SPATA22Q8NHS9 363 aa6.93□□□□□ -1.3
SPTLC1-205ENST00000477888 TMEM158Q8WZ71 300 aa6.93□□□□□ -1.3
SPTLC1-205ENST00000477888 SELENOSQ9BQE4 189 aa6.93□□□□□ -1.3
SPTLC1-205ENST00000477888 SYT11Q9BT88 431 aa6.93□□□□□ -1.3
SPTLC1-205ENST00000477888 TGIF2Q9GZN2 237 aa6.93□□□□□ -1.3
SPTLC1-205ENST00000477888 SLC25A51Q9H1U9 297 aa6.93□□□□□ -1.3
SPTLC1-205ENST00000477888 DMRT3Q9NQL9 472 aa6.93□□□□□ -1.3
SPTLC1-205ENST00000477888 FKBPLQ9UIM3 349 aa6.93□□□□□ -1.3
SPTLC1-205ENST00000477888 CBLCQ9ULV8 474 aa6.93□□□□□ -1.3
SPTLC1-205ENST00000477888 NUP210LQ5VU65 1888 aa6.93□□□□□ -1.3
SPTLC1-205ENST00000477888 CUBNO60494 3623 aa6.92□□□□□ -1.3
SPTLC1-205ENST00000477888 TMCO5BA8MYB1 307 aa6.92□□□□□ -1.3
SPTLC1-205ENST00000477888 SYT5O00445 386 aa6.92□□□□□ -1.3
SPTLC1-205ENST00000477888 PES1O00541 588 aaKnown RBP6.92□□□□□ -1.3
SPTLC1-205ENST00000477888 DDX3XO00571 662 aaKnown RBP eCLIP6.92□□□□□ -1.3
SPTLC1-205ENST00000477888 RASGRF2O14827 1237 aa6.92□□□□□ -1.3
SPTLC1-205ENST00000477888 SMAD7O15105 426 aaKnown RBP6.92□□□□□ -1.3
SPTLC1-205ENST00000477888 ARHGEF9O43307 516 aa6.92□□□□□ -1.3
SPTLC1-205ENST00000477888 BUD23O43709 281 aaKnown RBP6.92□□□□□ -1.3
SPTLC1-205ENST00000477888 CTSVO60911 334 aa6.92□□□□□ -1.3
SPTLC1-205ENST00000477888 SUN1O94901 812 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms