RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 ARL5CA6NH57 179 aa12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 MOXD2PA6NHM9 499 aa12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 C3orf70A6NLC5 250 aaPredicted RBP12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 HPRP00739 348 aa12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 RAF1P04049 648 aa12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 TPOP07202 933 aa12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 H2AFB1P0C5Y9 115 aa12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 H2AFB2P0C5Z0 115 aa12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 HK1P19367 917 aa12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 CLCN5P51795 746 aa12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 RAC1P63000 192 aa12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 RNF4P78317 190 aa12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 SSPNQ14714 243 aa12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 BAK1Q16611 211 aa12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 TCTE1Q5JU00 501 aa12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 N4BP2L1Q5TBK1 243 aaPredicted RBP12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 DPP10Q8N608 796 aa12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 PXYLP1Q8TE99 480 aa12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 ACSF2Q96CM8 615 aaPredicted RBP12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 RADILQ96JH8 1075 aa12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 HS6ST2Q96MM7 605 aa12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 NAT9Q9BTE0 207 aa12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 OR51M1Q9H341 326 aa12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 ELOVL6Q9H5J4 265 aa12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 AGO3Q9H9G7 860 aaKnown RBP12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 MED9Q9NWA0 146 aa12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 PTTG3PQ9NZH4 202 aa12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 COPZ2Q9P299 210 aa12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 ABCD2Q9UBJ2 740 aa12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 AURKCQ9UQB9 309 aa12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 TRABD2BA6NFA1 517 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 H7C2Y5 167 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 SGCEO43556 437 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 HSPA4LO95757 839 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 CD52P31358 61 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 ACSL1P33121 698 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 SPAM1P38567 509 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 RPL34P49207 117 aaKnown RBP12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 FNTBP49356 437 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 ALDH3A2P51648 485 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 ACLYP53396 1101 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 PUDPQ08623 228 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 TFDP2Q14188 446 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 LCN8Q6JVE9 175 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 SLC26A9Q7LBE3 791 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 NECAB2Q7Z6G3 386 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 SYVN1Q86TM6 617 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 C10orf107Q8IVU9 208 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 KLHL36Q8N4N3 616 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 MAPK15Q8TD08 544 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 VPS39Q96JC1 886 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 SENP8Q96LD8 212 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 ZNF285Q96NJ3 590 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 FTHL17Q9BXU8 183 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 BEX2Q9BXY8 128 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 TLR9Q9NR96 1032 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 CREBZFQ9NS37 354 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 ZNF275Q9NSD4 429 aaPredicted RBP12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 ABCC13Q9NSE7 274 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 LYARQ9NX58 379 aaKnown RBP12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 RDH8Q9NYR8 311 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 VTI1BQ9UEU0 232 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 EPHA6Q9UF33 1036 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 UBQLN2Q9UHD9 624 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 ERVK-19Q9WJR5 959 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 PCDHGA9Q9Y5G4 932 aaKnown RBP12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 U3KQV3 271 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 A0A0U1RQF3 1178 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 hCG_1807616A0A1W2PRN6 198 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 TTC24A2A3L6 582 aaPredicted RBP12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 CCDC78A2IDD5 438 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 MTMR11A4FU01 709 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 FAM149AA5PLN7 773 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 GABRDO14764 452 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 CST8O60676 142 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 GRAP2O75791 330 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 DHFRP00374 187 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 S100A8P05109 93 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 CD1EP15812 388 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 ATP6V1B2P21281 511 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 OXTRP30559 389 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 ARRB2P32121 409 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 CSKP41240 450 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 BRCC3P46736 316 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 CLCNKAP51800 687 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 SMAD2Q15796 467 aaKnown RBP12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 CDO1Q16878 200 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 TUSC1Q2TAM9 212 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 PAN2Q504Q3 1202 aaKnown RBP12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 MANEALQ5VSG8 457 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 SUSD1Q6UWL2 747 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 METTL23Q86XA0 190 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 RFX6Q8HWS3 928 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 CHPFQ8IZ52 775 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 PAPD5Q8NDF8 572 aaKnown RBP12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 CD99L2Q8TCZ2 262 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 ELMO1Q92556 727 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 REPS1Q96D71 796 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 PGAP3Q96FM1 320 aaPredicted RBP12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 C10orf90Q96M02 699 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms