RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 TLR6Q9Y2C9 796 aa18.18■□□□□ 0.5
VARS2-209ENST00000477288 H0YGN5 161 aa18.17■□□□□ 0.5
VARS2-209ENST00000477288 HSD17B2P37059 387 aa18.17■□□□□ 0.5
VARS2-209ENST00000477288 IDH3AP50213 366 aa18.17■□□□□ 0.5
VARS2-209ENST00000477288 SLBPQ14493 270 aaKnown RBP eCLIP18.17■□□□□ 0.5
VARS2-209ENST00000477288 KLHL22Q53GT1 634 aa18.17■□□□□ 0.5
VARS2-209ENST00000477288 TTLQ8NG68 377 aa18.17■□□□□ 0.5
VARS2-209ENST00000477288 NXPE2Q96DL1 559 aa18.17■□□□□ 0.5
VARS2-209ENST00000477288 RPL26L1Q9UNX3 145 aaKnown RBP18.17■□□□□ 0.5
VARS2-209ENST00000477288 A0A1W2PRB8 838 aa18.17■□□□□ 0.5
VARS2-209ENST00000477288 PRORSD1PA6NEY8 169 aa18.17■□□□□ 0.5
VARS2-209ENST00000477288 SRRM3A6NNA2 597 aaPredicted RBP18.17■□□□□ 0.5
VARS2-209ENST00000477288 SMAD9O15198 467 aaKnown RBP18.17■□□□□ 0.5
VARS2-209ENST00000477288 ORC5O43913 435 aa18.17■□□□□ 0.5
VARS2-209ENST00000477288 UGT1A9O60656 530 aa18.17■□□□□ 0.5
VARS2-209ENST00000477288 MTX2O75431 263 aa18.17■□□□□ 0.5
VARS2-209ENST00000477288 RPP14O95059 124 aaKnown RBP18.17■□□□□ 0.5
VARS2-209ENST00000477288 TGFB1P01137 390 aa18.17■□□□□ 0.5
VARS2-209ENST00000477288 GPIP06744 558 aa18.17■□□□□ 0.5
VARS2-209ENST00000477288 UGT1A6P19224 532 aa18.17■□□□□ 0.5
VARS2-209ENST00000477288 UGT1A1P22309 533 aa18.17■□□□□ 0.5
VARS2-209ENST00000477288 UGT1A4P22310 534 aa18.17■□□□□ 0.5
VARS2-209ENST00000477288 UGT1A3P35503 534 aa18.17■□□□□ 0.5
VARS2-209ENST00000477288 EIF1AXP47813 144 aaKnown RBP18.17■□□□□ 0.5
VARS2-209ENST00000477288 SLC10A6Q3KNW5 377 aa18.17■□□□□ 0.5
VARS2-209ENST00000477288 COLEC12Q5KU26 742 aa18.17■□□□□ 0.5
VARS2-209ENST00000477288 MBOAT1Q6ZNC8 495 aa18.17■□□□□ 0.5
VARS2-209ENST00000477288 PNLDC1Q8NA58 520 aaKnown RBP18.17■□□□□ 0.5
VARS2-209ENST00000477288 OR5M3Q8NGP4 307 aa18.17■□□□□ 0.5
VARS2-209ENST00000477288 UGT1A7Q9HAW7 530 aa18.17■□□□□ 0.5
VARS2-209ENST00000477288 UGT1A10Q9HAW8 530 aa18.17■□□□□ 0.5
VARS2-209ENST00000477288 UGT1A8Q9HAW9 530 aa18.17■□□□□ 0.5
VARS2-209ENST00000477288 FBXO9Q9UK97 447 aaPredicted RBP18.17■□□□□ 0.5
VARS2-209ENST00000477288 YIPF1Q9Y548 306 aa18.17■□□□□ 0.5
VARS2-209ENST00000477288 CAPN14A8MX76 684 aa18.17■□□□□ 0.5
VARS2-209ENST00000477288 NDUFS1P28331 727 aa18.17■□□□□ 0.5
VARS2-209ENST00000477288 CHRNA4P43681 627 aa18.17■□□□□ 0.5
VARS2-209ENST00000477288 CYP27C1Q4G0S4 372 aa18.17■□□□□ 0.5
VARS2-209ENST00000477288 CWF19L1Q69YN2 538 aaKnown RBP18.17■□□□□ 0.5
VARS2-209ENST00000477288 FOXR2Q6PJQ5 311 aa18.17■□□□□ 0.5
VARS2-209ENST00000477288 ADGRD1Q6QNK2 874 aa18.17■□□□□ 0.5
VARS2-209ENST00000477288 ZNF782Q6ZMW2 699 aaPredicted RBP18.17■□□□□ 0.5
VARS2-209ENST00000477288 LMX1AQ8TE12 382 aa18.17■□□□□ 0.5
VARS2-209ENST00000477288 CDK15Q96Q40 435 aa18.17■□□□□ 0.5
VARS2-209ENST00000477288 MIPEPQ99797 713 aa18.17■□□□□ 0.5
VARS2-209ENST00000477288 INSL6Q9Y581 213 aa18.17■□□□□ 0.5
VARS2-209ENST00000477288 DNAJA2O60884 412 aa18.17■□□□□ 0.5
VARS2-209ENST00000477288 CLEC3AO75596 197 aa18.17■□□□□ 0.5
VARS2-209ENST00000477288 MECP2P51608 486 aaKnown RBP18.17■□□□□ 0.5
VARS2-209ENST00000477288 OR12D2P58182 307 aa18.17■□□□□ 0.5
VARS2-209ENST00000477288 NFKB2Q00653 900 aa18.17■□□□□ 0.5
VARS2-209ENST00000477288 RFTN1Q14699 578 aaPredicted RBP18.17■□□□□ 0.5
VARS2-209ENST00000477288 SCGB2B2Q4G0G5 96 aa18.17■□□□□ 0.5
VARS2-209ENST00000477288 C4orf32Q8N8J7 132 aa18.17■□□□□ 0.5
VARS2-209ENST00000477288 C7orf26Q96N11 449 aa18.17■□□□□ 0.5
VARS2-209ENST00000477288 SHOX2O60902 331 aaPredicted RBP18.16■□□□□ 0.5
VARS2-209ENST00000477288 SLC10A7Q0GE19 358 aa18.16■□□□□ 0.5
VARS2-209ENST00000477288 NXPE1Q8N323 547 aa18.16■□□□□ 0.5
VARS2-209ENST00000477288 TMEM156Q8N614 296 aa18.16■□□□□ 0.5
VARS2-209ENST00000477288 OR13C4Q8NGS5 318 aa18.16■□□□□ 0.5
VARS2-209ENST00000477288 ZNF514Q96K75 400 aaPredicted RBP18.16■□□□□ 0.5
VARS2-209ENST00000477288 PARPBPQ9NWS1 579 aa18.16■□□□□ 0.5
VARS2-209ENST00000477288 KLRF1Q9NZS2 232 aa18.16■□□□□ 0.5
VARS2-209ENST00000477288 PEX12O00623 359 aa18.16■□□□□ 0.5
VARS2-209ENST00000477288 LSM1O15116 133 aaKnown RBP18.16■□□□□ 0.5
VARS2-209ENST00000477288 SRCP12931 536 aa18.16■□□□□ 0.5
VARS2-209ENST00000477288 EDNRAP25101 427 aa18.16■□□□□ 0.5
VARS2-209ENST00000477288 MAGEA2P43356 314 aa18.16■□□□□ 0.5
VARS2-209ENST00000477288 GHRHRQ02643 423 aa18.16■□□□□ 0.5
VARS2-209ENST00000477288 OGFRL1Q5TC84 451 aaPredicted RBP18.16■□□□□ 0.5
VARS2-209ENST00000477288 ERMAPQ96PL5 475 aaPredicted RBP18.16■□□□□ 0.5
VARS2-209ENST00000477288 PCDHGB7Q9Y5F8 929 aa18.16■□□□□ 0.5
VARS2-209ENST00000477288 E7EQ34 232 aa18.16■□□□□ 0.5
VARS2-209ENST00000477288 ARVCFO00192 962 aa18.16■□□□□ 0.5
VARS2-209ENST00000477288 PLOD2O00469 737 aa18.16■□□□□ 0.5
VARS2-209ENST00000477288 SLC7A4O43246 635 aa18.16■□□□□ 0.5
VARS2-209ENST00000477288 NKD2Q969F2 451 aaPredicted RBP18.16■□□□□ 0.5
VARS2-209ENST00000477288 ADAD1Q96M93 576 aaKnown RBP18.16■□□□□ 0.5
VARS2-209ENST00000477288 HPF1Q9NWY4 346 aa18.16■□□□□ 0.5
VARS2-209ENST00000477288 MAU2Q9Y6X3 613 aa18.16■□□□□ 0.5
VARS2-209ENST00000477288 VSTM5A8MXK1 200 aa18.16■□□□□ 0.5
VARS2-209ENST00000477288 NUDT13Q86X67 352 aa18.16■□□□□ 0.5
VARS2-209ENST00000477288 SLITRK4Q8IW52 837 aa18.16■□□□□ 0.5
VARS2-209ENST00000477288 MPP5Q8N3R9 675 aa18.16■□□□□ 0.5
VARS2-209ENST00000477288 FSTL5Q8N475 847 aaPredicted RBP18.16■□□□□ 0.5
VARS2-209ENST00000477288 SLC13A3Q8WWT9 602 aa18.16■□□□□ 0.5
VARS2-209ENST00000477288 CLEC4DQ8WXI8 215 aa18.16■□□□□ 0.5
VARS2-209ENST00000477288 PYCR2Q96C36 320 aa18.16■□□□□ 0.5
VARS2-209ENST00000477288 ZNF180Q9UJW8 692 aa18.16■□□□□ 0.5
VARS2-209ENST00000477288 EIF1AYO14602 144 aaKnown RBP18.16■□□□□ 0.5
VARS2-209ENST00000477288 ACSL1P33121 698 aa18.16■□□□□ 0.5
VARS2-209ENST00000477288 EOGTQ5NDL2 527 aa18.16■□□□□ 0.5
VARS2-209ENST00000477288 PRPF38BQ5VTL8 546 aaKnown RBP18.16■□□□□ 0.5
VARS2-209ENST00000477288 IFNL1Q8IU54 200 aa18.16■□□□□ 0.5
VARS2-209ENST00000477288 K7EPI3 171 aa18.15■□□□□ 0.5
VARS2-209ENST00000477288 HCAR3P49019 387 aa18.15■□□□□ 0.5
VARS2-209ENST00000477288 CD47Q08722 323 aa18.15■□□□□ 0.5
VARS2-209ENST00000477288 ARHGAP40Q5TG30 622 aa18.15■□□□□ 0.5
VARS2-209ENST00000477288 ZNF101Q8IZC7 436 aa18.15■□□□□ 0.5
VARS2-209ENST00000477288 OR5AK3PQ8NH89 298 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms