RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 ADSLP30566 484 aaPredicted RBP13.98□□□□□ -0.17
COL4A6-206ENST00000477085 CASP2P42575 452 aa13.98□□□□□ -0.17
COL4A6-206ENST00000477085 NME5P56597 212 aa13.98□□□□□ -0.17
COL4A6-206ENST00000477085 TSTA3Q13630 321 aaPredicted RBP13.98□□□□□ -0.17
COL4A6-206ENST00000477085 SQLEQ14534 574 aa13.98□□□□□ -0.17
COL4A6-206ENST00000477085 SLC30A9Q6PML9 568 aa13.98□□□□□ -0.17
COL4A6-206ENST00000477085 PAOXQ6QHF9 649 aa13.98□□□□□ -0.17
COL4A6-206ENST00000477085 TSSK4Q6SA08 328 aa13.98□□□□□ -0.17
COL4A6-206ENST00000477085 CADM4Q8NFZ8 388 aa13.98□□□□□ -0.17
COL4A6-206ENST00000477085 WDR20Q8TBZ3 569 aa13.98□□□□□ -0.17
COL4A6-206ENST00000477085 BTBD10Q9BSF8 475 aa13.98□□□□□ -0.17
COL4A6-206ENST00000477085 C1orf50Q9BV19 199 aa13.98□□□□□ -0.17
COL4A6-206ENST00000477085 XKR8Q9H6D3 395 aa13.98□□□□□ -0.17
COL4A6-206ENST00000477085 TRNAU1APQ9NX07 287 aaKnown RBP13.98□□□□□ -0.17
COL4A6-206ENST00000477085 ZNF624Q9P2J8 865 aaPredicted RBP13.98□□□□□ -0.17
COL4A6-206ENST00000477085 PCOLCE2Q9UKZ9 415 aa13.98□□□□□ -0.17
COL4A6-206ENST00000477085 AXIN1O15169 862 aa13.97□□□□□ -0.17
COL4A6-206ENST00000477085 UGDHO60701 494 aa13.97□□□□□ -0.17
COL4A6-206ENST00000477085 RPN2P04844 631 aa13.97□□□□□ -0.17
COL4A6-206ENST00000477085 MTHFD1P11586 935 aaKnown RBP13.97□□□□□ -0.17
COL4A6-206ENST00000477085 NQO1P15559 274 aaKnown RBP13.97□□□□□ -0.17
COL4A6-206ENST00000477085 GNAZP19086 355 aa13.97□□□□□ -0.17
COL4A6-206ENST00000477085 PRDX6P30041 224 aa13.97□□□□□ -0.17
COL4A6-206ENST00000477085 NUDT1P36639 197 aa13.97□□□□□ -0.17
COL4A6-206ENST00000477085 ACTR1BP42025 376 aa13.97□□□□□ -0.17
COL4A6-206ENST00000477085 ATP4BP51164 291 aa13.97□□□□□ -0.17
COL4A6-206ENST00000477085 ACTR1AP61163 376 aa13.97□□□□□ -0.17
COL4A6-206ENST00000477085 RPL6Q02878 288 aaKnown RBP13.97□□□□□ -0.17
COL4A6-206ENST00000477085 LRP8Q14114 963 aa13.97□□□□□ -0.17
COL4A6-206ENST00000477085 ARHGAP19Q14CB8 494 aa13.97□□□□□ -0.17
COL4A6-206ENST00000477085 WASH2PQ6VEQ5 465 aa13.97□□□□□ -0.17
COL4A6-206ENST00000477085 GK5Q6ZS86 529 aa13.97□□□□□ -0.17
COL4A6-206ENST00000477085 SNX32Q86XE0 403 aa13.97□□□□□ -0.17
COL4A6-206ENST00000477085 SFTPA2Q8IWL1 248 aa13.97□□□□□ -0.17
COL4A6-206ENST00000477085 C1orf216Q8TAB5 229 aa13.97□□□□□ -0.17
COL4A6-206ENST00000477085 CMTM5Q96DZ9 223 aa13.97□□□□□ -0.17
COL4A6-206ENST00000477085 TEX37Q96LM6 180 aa13.97□□□□□ -0.17
COL4A6-206ENST00000477085 CADM1Q9BY67 442 aaKnown RBP13.97□□□□□ -0.17
COL4A6-206ENST00000477085 WASH6PQ9NQA3 447 aa13.97□□□□□ -0.17
COL4A6-206ENST00000477085 CCDC177Q9NQR7 707 aaPredicted RBP13.97□□□□□ -0.17
COL4A6-206ENST00000477085 AASDHPPTQ9NRN7 309 aa13.97□□□□□ -0.17
COL4A6-206ENST00000477085 GPRC5BQ9NZH0 403 aa13.97□□□□□ -0.17
COL4A6-206ENST00000477085 KCNE2Q9Y6J6 123 aa13.97□□□□□ -0.17
COL4A6-206ENST00000477085 LRP4O75096 1905 aa13.97□□□□□ -0.17
COL4A6-206ENST00000477085 TRBV23OR9-2A0A075B6M9 112 aa13.96□□□□□ -0.17
COL4A6-206ENST00000477085 PSMD12O00232 456 aaPredicted RBP13.96□□□□□ -0.17
COL4A6-206ENST00000477085 GSC2O15499 205 aa13.96□□□□□ -0.17
COL4A6-206ENST00000477085 HNRNPCL1O60812 293 aaKnown RBP13.96□□□□□ -0.17
COL4A6-206ENST00000477085 TNFP01375 233 aa13.96□□□□□ -0.17
COL4A6-206ENST00000477085 PSMB5P28074 263 aa13.96□□□□□ -0.17
COL4A6-206ENST00000477085 ERVK-8P63133 956 aa13.96□□□□□ -0.17
COL4A6-206ENST00000477085 KIAA0040Q15053 153 aa13.96□□□□□ -0.17
COL4A6-206ENST00000477085 NR6A1Q15406 480 aa13.96□□□□□ -0.17
COL4A6-206ENST00000477085 AP5B1Q2VPB7 878 aa13.96□□□□□ -0.17
COL4A6-206ENST00000477085 GRHL2Q6ISB3 625 aa13.96□□□□□ -0.17
COL4A6-206ENST00000477085 MAMSTRQ6ZN01 415 aa13.96□□□□□ -0.17
COL4A6-206ENST00000477085 SPATA19Q7Z5L4 167 aa13.96□□□□□ -0.17
COL4A6-206ENST00000477085 OR52E1Q8NGJ3 308 aa13.96□□□□□ -0.17
COL4A6-206ENST00000477085 GPBAR1Q8TDU6 330 aa13.96□□□□□ -0.17
COL4A6-206ENST00000477085 SETD7Q8WTS6 366 aaKnown RBP13.96□□□□□ -0.17
COL4A6-206ENST00000477085 SELENOMQ8WWX9 145 aa13.96□□□□□ -0.17
COL4A6-206ENST00000477085 JPH3Q8WXH2 748 aaPredicted RBP13.96□□□□□ -0.17
COL4A6-206ENST00000477085 WDR34Q96EX3 536 aa13.96□□□□□ -0.17
COL4A6-206ENST00000477085 KLHDC7BQ96G42 594 aa13.96□□□□□ -0.17
COL4A6-206ENST00000477085 ACAT2Q9BWD1 397 aa13.96□□□□□ -0.17
COL4A6-206ENST00000477085 SPNS1Q9H2V7 528 aa13.96□□□□□ -0.17
COL4A6-206ENST00000477085 SDR39U1Q9NRG7 319 aaPredicted RBP13.96□□□□□ -0.17
COL4A6-206ENST00000477085 RIC8BQ9NVN3 520 aa13.96□□□□□ -0.17
COL4A6-206ENST00000477085 AIG1Q9NVV5 245 aa13.96□□□□□ -0.17
COL4A6-206ENST00000477085 CCDC167Q9P0B6 97 aa13.96□□□□□ -0.17
COL4A6-206ENST00000477085 SNX6Q9UNH7 406 aa13.96□□□□□ -0.17
COL4A6-206ENST00000477085 ICKQ9UPZ9 632 aa13.96□□□□□ -0.17
COL4A6-206ENST00000477085 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.96□□□□□ -0.18
COL4A6-206ENST00000477085 C9JVG2 144 aa13.96□□□□□ -0.18
COL4A6-206ENST00000477085 H0YIV9 168 aa13.96□□□□□ -0.18
COL4A6-206ENST00000477085 SLC28A1O00337 649 aa13.96□□□□□ -0.18
COL4A6-206ENST00000477085 CLGNO14967 610 aa13.96□□□□□ -0.18
COL4A6-206ENST00000477085 KRT6AP02538 564 aa13.96□□□□□ -0.18
COL4A6-206ENST00000477085 KRT6BP04259 564 aa13.96□□□□□ -0.18
COL4A6-206ENST00000477085 THRAP10827 490 aa13.96□□□□□ -0.18
COL4A6-206ENST00000477085 SLC19A1P41440 591 aa13.96□□□□□ -0.18
COL4A6-206ENST00000477085 ZFP36L2P47974 494 aaKnown RBP13.96□□□□□ -0.18
COL4A6-206ENST00000477085 KRT6CP48668 564 aa13.96□□□□□ -0.18
COL4A6-206ENST00000477085 RASSF2P50749 326 aa13.96□□□□□ -0.18
COL4A6-206ENST00000477085 SLC25A3Q00325 362 aa13.96□□□□□ -0.18
COL4A6-206ENST00000477085 MEF2AQ02078 507 aaPredicted RBP13.96□□□□□ -0.18
COL4A6-206ENST00000477085 EMX2Q04743 252 aa13.96□□□□□ -0.18
COL4A6-206ENST00000477085 ATP6AP1LQ52LC2 224 aa13.96□□□□□ -0.18
COL4A6-206ENST00000477085 AGKQ53H12 422 aa13.96□□□□□ -0.18
COL4A6-206ENST00000477085 PRAMEF14Q5SWL7 426 aa13.96□□□□□ -0.18
COL4A6-206ENST00000477085 PRAMEF13Q5VWM6 474 aa13.96□□□□□ -0.18
COL4A6-206ENST00000477085 FRG2Q64ET8 278 aa13.96□□□□□ -0.18
COL4A6-206ENST00000477085 ATG9BQ674R7 924 aa13.96□□□□□ -0.18
COL4A6-206ENST00000477085 TMPRSS11BQ86T26 416 aa13.96□□□□□ -0.18
COL4A6-206ENST00000477085 TMEFF1Q8IYR6 380 aa13.96□□□□□ -0.18
COL4A6-206ENST00000477085 FNDC5Q8NAU1 212 aa13.96□□□□□ -0.18
COL4A6-206ENST00000477085 RP9Q8TA86 221 aaKnown RBP13.96□□□□□ -0.18
COL4A6-206ENST00000477085 NUDT8Q8WV74 236 aa13.96□□□□□ -0.18
COL4A6-206ENST00000477085 FRG2BQ96QU4 278 aa13.96□□□□□ -0.18
COL4A6-206ENST00000477085 PCED1AQ9H1Q7 454 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms