RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 HSPA4LO95757 839 aa4.44□□□□□ -1.7
PTCD3-211ENST00000476215 EML2O95834 649 aa4.44□□□□□ -1.7
PTCD3-211ENST00000476215 EPCAMP16422 314 aa4.44□□□□□ -1.7
PTCD3-211ENST00000476215 TCEA1P23193 301 aaKnown RBP4.44□□□□□ -1.7
PTCD3-211ENST00000476215 CSTF2P33240 577 aaKnown RBP eCLIP4.44□□□□□ -1.7
PTCD3-211ENST00000476215 WNT5AP41221 380 aa4.44□□□□□ -1.7
PTCD3-211ENST00000476215 GLIPR1P48060 266 aa4.44□□□□□ -1.7
PTCD3-211ENST00000476215 NPY4RP50391 375 aa4.44□□□□□ -1.7
PTCD3-211ENST00000476215 HERV-K104P61576 105 aa4.44□□□□□ -1.7
PTCD3-211ENST00000476215 KLC1Q07866 573 aa4.44□□□□□ -1.7
PTCD3-211ENST00000476215 SQLEQ14534 574 aa4.44□□□□□ -1.7
PTCD3-211ENST00000476215 NPTX1Q15818 432 aa4.44□□□□□ -1.7
PTCD3-211ENST00000476215 PHKG1Q16816 387 aa4.44□□□□□ -1.7
PTCD3-211ENST00000476215 XKR3Q5GH77 459 aa4.44□□□□□ -1.7
PTCD3-211ENST00000476215 FFAR4Q5NUL3 377 aa4.44□□□□□ -1.7
PTCD3-211ENST00000476215 SUSD1Q6UWL2 747 aa4.44□□□□□ -1.7
PTCD3-211ENST00000476215 VSIG1Q86XK7 387 aa4.44□□□□□ -1.7
PTCD3-211ENST00000476215 RYBPQ8N488 228 aaPredicted RBP4.44□□□□□ -1.7
PTCD3-211ENST00000476215 OR4C3Q8NH37 302 aa4.44□□□□□ -1.7
PTCD3-211ENST00000476215 HPSE2Q8WWQ2 592 aa4.44□□□□□ -1.7
PTCD3-211ENST00000476215 PROX1Q92786 737 aa4.44□□□□□ -1.7
PTCD3-211ENST00000476215 GBP5Q96PP8 586 aa4.44□□□□□ -1.7
PTCD3-211ENST00000476215 EGFL8Q99944 293 aa4.44□□□□□ -1.7
PTCD3-211ENST00000476215 KATNB1Q9BVA0 655 aa4.44□□□□□ -1.7
PTCD3-211ENST00000476215 FN3KQ9H479 309 aa4.44□□□□□ -1.7
PTCD3-211ENST00000476215 ZNF696Q9H7X3 374 aa4.44□□□□□ -1.7
PTCD3-211ENST00000476215 Q9H8V8 135 aa4.44□□□□□ -1.7
PTCD3-211ENST00000476215 XAB2Q9HCS7 855 aaKnown RBP4.44□□□□□ -1.7
PTCD3-211ENST00000476215 DNAJC4Q9NNZ3 241 aa4.44□□□□□ -1.7
PTCD3-211ENST00000476215 TXNDC16Q9P2K2 825 aa4.44□□□□□ -1.7
PTCD3-211ENST00000476215 TNNQ9UQP3 1299 aa4.44□□□□□ -1.7
PTCD3-211ENST00000476215 A0A1W2PPK0 400 aa4.43□□□□□ -1.7
PTCD3-211ENST00000476215 EIF5BO60841 1220 aaKnown RBP4.43□□□□□ -1.7
PTCD3-211ENST00000476215 SOCS5O75159 536 aa4.43□□□□□ -1.7
PTCD3-211ENST00000476215 TBCAO75347 108 aaKnown RBP4.43□□□□□ -1.7
PTCD3-211ENST00000476215 DFFBO76075 338 aa4.43□□□□□ -1.7
PTCD3-211ENST00000476215 DDHD2O94830 711 aa4.43□□□□□ -1.7
PTCD3-211ENST00000476215 HMBSP08397 361 aa4.43□□□□□ -1.7
PTCD3-211ENST00000476215 DARSP14868 501 aaKnown RBP4.43□□□□□ -1.7
PTCD3-211ENST00000476215 GNB3P16520 340 aa4.43□□□□□ -1.7
PTCD3-211ENST00000476215 ALDH3A2P51648 485 aa4.43□□□□□ -1.7
PTCD3-211ENST00000476215 GCNT1Q02742 428 aa4.43□□□□□ -1.7
PTCD3-211ENST00000476215 HERC3Q15034 1050 aa4.43□□□□□ -1.7
PTCD3-211ENST00000476215 ARHGAP17Q68EM7 881 aa4.43□□□□□ -1.7
PTCD3-211ENST00000476215 ARHGAP11AQ6P4F7 1023 aa4.43□□□□□ -1.7
PTCD3-211ENST00000476215 ZNF449Q6P9G9 518 aa4.43□□□□□ -1.7
PTCD3-211ENST00000476215 ZNF790Q6PG37 636 aa4.43□□□□□ -1.7
PTCD3-211ENST00000476215 IL27RAQ6UWB1 636 aa4.43□□□□□ -1.7
PTCD3-211ENST00000476215 FAM47EQ6ZV65 393 aa4.43□□□□□ -1.7
PTCD3-211ENST00000476215 THNSL1Q8IYQ7 743 aa4.43□□□□□ -1.7
PTCD3-211ENST00000476215 NDUFAF2Q8N183 169 aa4.43□□□□□ -1.7
PTCD3-211ENST00000476215 OR13C3Q8NGS6 347 aa4.43□□□□□ -1.7
PTCD3-211ENST00000476215 KCNE4Q8WWG9 221 aa4.43□□□□□ -1.7
PTCD3-211ENST00000476215 SUSD6Q92537 303 aa4.43□□□□□ -1.7
PTCD3-211ENST00000476215 LGALS12Q96DT0 336 aa4.43□□□□□ -1.7
PTCD3-211ENST00000476215 MGME1Q9BQP7 344 aa4.43□□□□□ -1.7
PTCD3-211ENST00000476215 GTPBP2Q9BX10 602 aaKnown RBP4.43□□□□□ -1.7
PTCD3-211ENST00000476215 CPVLQ9H3G5 476 aa4.43□□□□□ -1.7
PTCD3-211ENST00000476215 SCRT2Q9NQ03 307 aa4.43□□□□□ -1.7
PTCD3-211ENST00000476215 WIZO95785 1651 aa4.42□□□□□ -1.7
PTCD3-211ENST00000476215 ARHGEF37A1IGU5 675 aa4.42□□□□□ -1.7
PTCD3-211ENST00000476215 ANXA2P2A6NMY6 339 aa4.42□□□□□ -1.7
PTCD3-211ENST00000476215 CCDC188H7C350 402 aa4.42□□□□□ -1.7
PTCD3-211ENST00000476215 KLF11O14901 512 aa4.42□□□□□ -1.7
PTCD3-211ENST00000476215 ZNF500O60304 480 aaPredicted RBP4.42□□□□□ -1.7
PTCD3-211ENST00000476215 RPS6KA5O75582 802 aa4.42□□□□□ -1.7
PTCD3-211ENST00000476215 CDC123O75794 336 aaPredicted RBP4.42□□□□□ -1.7
PTCD3-211ENST00000476215 GSRP00390 522 aa4.42□□□□□ -1.7
PTCD3-211ENST00000476215 CEACAM1P13688 526 aa4.42□□□□□ -1.7
PTCD3-211ENST00000476215 MYL6BP14649 208 aa4.42□□□□□ -1.7
PTCD3-211ENST00000476215 ACAT1P24752 427 aaKnown RBP4.42□□□□□ -1.7
PTCD3-211ENST00000476215 CDC25CP30307 473 aa4.42□□□□□ -1.7
PTCD3-211ENST00000476215 MAGEA11P43364 429 aa4.42□□□□□ -1.7
PTCD3-211ENST00000476215 GNB1P62873 340 aa4.42□□□□□ -1.7
PTCD3-211ENST00000476215 DLK1P80370 383 aa4.42□□□□□ -1.7
PTCD3-211ENST00000476215 TFCP2Q12800 502 aa4.42□□□□□ -1.7
PTCD3-211ENST00000476215 RBM39Q14498 530 aaKnown RBP4.42□□□□□ -1.7
PTCD3-211ENST00000476215 SLC25A53Q5H9E4 307 aa4.42□□□□□ -1.7
PTCD3-211ENST00000476215 SLC35D3Q5M8T2 416 aa4.42□□□□□ -1.7
PTCD3-211ENST00000476215 OTUD3Q5T2D3 398 aaPredicted RBP4.42□□□□□ -1.7
PTCD3-211ENST00000476215 ENPP7Q6UWV6 458 aa4.42□□□□□ -1.7
PTCD3-211ENST00000476215 C11orf57Q6ZUT1 292 aaPredicted RBP4.42□□□□□ -1.7
PTCD3-211ENST00000476215 FAM219AQ8IW50 185 aa4.42□□□□□ -1.7
PTCD3-211ENST00000476215 TMEM178AQ8NBL3 297 aa4.42□□□□□ -1.7
PTCD3-211ENST00000476215 OR10Q1Q8NGQ4 319 aa4.42□□□□□ -1.7
PTCD3-211ENST00000476215 OR2T11Q8NH01 316 aa4.42□□□□□ -1.7
PTCD3-211ENST00000476215 SETD6Q8TBK2 473 aa4.42□□□□□ -1.7
PTCD3-211ENST00000476215 TMEM190Q8WZ59 177 aa4.42□□□□□ -1.7
PTCD3-211ENST00000476215 LRR1Q96L50 414 aa4.42□□□□□ -1.7
PTCD3-211ENST00000476215 SPAG5Q96R06 1193 aa4.42□□□□□ -1.7
PTCD3-211ENST00000476215 CCDC3Q9BQI4 270 aa4.42□□□□□ -1.7
PTCD3-211ENST00000476215 FERMT1Q9BQL6 677 aa4.42□□□□□ -1.7
PTCD3-211ENST00000476215 EDEM3Q9BZQ6 932 aa4.42□□□□□ -1.7
PTCD3-211ENST00000476215 ZMYND12Q9H0C1 365 aa4.42□□□□□ -1.7
PTCD3-211ENST00000476215 SHARPINQ9H0F6 387 aa4.42□□□□□ -1.7
PTCD3-211ENST00000476215 TLE6Q9H808 572 aa4.42□□□□□ -1.7
PTCD3-211ENST00000476215 ZNF71Q9NQZ8 489 aaPredicted RBP4.42□□□□□ -1.7
PTCD3-211ENST00000476215 CASTOR2A6NHX0 329 aa4.41□□□□□ -1.7
PTCD3-211ENST00000476215 SNX3O60493 162 aa4.41□□□□□ -1.7
PTCD3-211ENST00000476215 GPIP06744 558 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms