RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 GALPQ9UBC7 116 aa6.83□□□□□ -1.32
SHQ1-207ENST00000475558 OPTCQ9UBM4 332 aa6.83□□□□□ -1.32
SHQ1-207ENST00000475558 KLQ9UEF7 1012 aa6.83□□□□□ -1.32
SHQ1-207ENST00000475558 FTSJ1Q9UET6 329 aa6.83□□□□□ -1.32
SHQ1-207ENST00000475558 ADGRE2Q9UHX3 823 aa6.83□□□□□ -1.32
SHQ1-207ENST00000475558 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.83□□□□□ -1.32
SHQ1-207ENST00000475558 TMEM98Q9Y2Y6 226 aa6.83□□□□□ -1.32
SHQ1-207ENST00000475558 TRAF6Q9Y4K3 522 aa6.83□□□□□ -1.32
SHQ1-207ENST00000475558 KCNE2Q9Y6J6 123 aa6.83□□□□□ -1.32
SHQ1-207ENST00000475558 CKAP5Q14008 2032 aa6.83□□□□□ -1.32
SHQ1-207ENST00000475558 TMEM131Q92545 1883 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 KIR2DS5A0A0G2JLQ3 304 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 A0A0G2JNG1 304 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 SPTY2D1-AS1A0A0U1RR47 76 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 TEX51A0A1B0GUA7 166 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 PRSS38A1L453 326 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 H0Y8X5 98 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 KIR2DS3K7RE56 304 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 TLR4O00206 839 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 CDC7O00311 574 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 SLC22A2O15244 555 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 HNRNPCL1O60812 293 aaKnown RBP6.82□□□□□ -1.32
SHQ1-207ENST00000475558 MTX2O75431 263 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 CRCPO75575 148 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 C1QL1O75973 258 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 WDR47O94967 919 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 C1orf105O95561 183 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 IGHV4-34P06331 123 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 ENO1P06733 434 aaKnown RBP6.82□□□□□ -1.32
SHQ1-207ENST00000475558 EBLN1P0CF75 366 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 UROSP10746 265 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 CTSEP14091 401 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 PLA2G2AP14555 144 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 ITGB6P18564 788 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 ITPKBP27987 946 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 ACADLP28330 430 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 IGFALSP35858 605 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 RASSF2P50749 326 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 MNAT1P51948 309 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 HNRNPKP61978 463 aaKnown RBP eCLIP6.82□□□□□ -1.32
SHQ1-207ENST00000475558 KIR2DS5Q14953 304 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 RTP5Q14D33 572 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 ELOCQ15369 112 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 OR4D1Q15615 310 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 ZRSR2Q15696 482 aaKnown RBP6.82□□□□□ -1.32
SHQ1-207ENST00000475558 TBCCQ15814 346 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 HIST2H2ACQ16777 129 aaPredicted RBP6.82□□□□□ -1.32
SHQ1-207ENST00000475558 PPP1R3AQ16821 1122 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 SMU1Q2TAY7 513 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 ZNF658BQ4V348 819 aaPredicted RBP6.82□□□□□ -1.32
SHQ1-207ENST00000475558 UNC50Q53HI1 259 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 ARL13AQ5H913 290 aaPredicted RBP6.82□□□□□ -1.32
SHQ1-207ENST00000475558 SH2D4BQ5SQS7 431 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 LIPJQ5W064 366 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 HIST2H2AA3Q6FI13 130 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 CAPN13Q6MZZ7 669 aaPredicted RBP6.82□□□□□ -1.32
SHQ1-207ENST00000475558 SBSNQ6UWP8 590 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 FRMD7Q6ZUT3 714 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 ACAD11Q709F0 780 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 CHST15Q7LFX5 561 aaPredicted RBP6.82□□□□□ -1.32
SHQ1-207ENST00000475558 GPR155Q7Z3F1 870 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 MILR1Q7Z6M3 343 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 YTHDF3Q7Z739 585 aaKnown RBP6.82□□□□□ -1.32
SHQ1-207ENST00000475558 C11orf96Q7Z7L8 435 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 ZNF547Q8IVP9 402 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 DCUN1D3Q8IWE4 304 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 CEP70Q8NHQ1 597 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 GIMAP7Q8NHV1 300 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 HMGCLL1Q8TB92 370 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 SH3KBP1Q96B97 665 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 SLC22A18Q96BI1 424 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 REPS1Q96D71 796 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 LRRC37BQ96QE4 947 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 OR2M4Q96R27 311 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 ZNF382Q96SR6 550 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 SLC30A3Q99726 388 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 HAUS8Q9BT25 410 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 LGR4Q9BXB1 951 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 NRSN2Q9GZP1 204 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 OR52A5Q9H2C5 316 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 RABEP2Q9H5N1 569 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 C6orf106Q9H6K1 298 aaPredicted RBP6.82□□□□□ -1.32
SHQ1-207ENST00000475558 KLC4Q9NSK0 619 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 FGFR1OP2Q9NVK5 253 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 DNAJC28Q9NX36 388 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 WWOXQ9NZC7 414 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 MOSPD1Q9UJG1 213 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 SUFUQ9UMX1 484 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 CDYLQ9Y232 598 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 PDE10AQ9Y233 779 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 ASF1AQ9Y294 204 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 OR1A2Q9Y585 309 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 AK5Q9Y6K8 562 aa6.82□□□□□ -1.32
SHQ1-207ENST00000475558 KALRNO60229 2985 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 ZNF462Q96JM2 2506 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 NAV2Q8IVL1 2488 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 A0A1B0GTQ1 180 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 SERTM1A2A2V5 107 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 NPEPPSL1A6NEC2 478 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 POM121BA6NF01 834 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms