RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 C17orf62Q9BQA9 187 aa13.52□□□□□ -0.25
ATG9A-220ENST00000475339 NLE1Q9NVX2 485 aaPredicted RBP13.52□□□□□ -0.25
ATG9A-220ENST00000475339 BFARQ9NZS9 450 aa13.52□□□□□ -0.25
ATG9A-220ENST00000475339 SERTAD3Q9UJW9 196 aa13.52□□□□□ -0.25
ATG9A-220ENST00000475339 TMPRSS11EQ9UL52 423 aa13.52□□□□□ -0.25
ATG9A-220ENST00000475339 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.51□□□□□ -0.25
ATG9A-220ENST00000475339 E7EQ34 232 aa13.51□□□□□ -0.25
ATG9A-220ENST00000475339 GAPDHSO14556 408 aaPredicted RBP13.51□□□□□ -0.25
ATG9A-220ENST00000475339 TPSB2P20231 275 aa13.51□□□□□ -0.25
ATG9A-220ENST00000475339 ADRA1DP25100 572 aa13.51□□□□□ -0.25
ATG9A-220ENST00000475339 CASQ1P31415 396 aa13.51□□□□□ -0.25
ATG9A-220ENST00000475339 HALP42357 657 aa13.51□□□□□ -0.25
ATG9A-220ENST00000475339 CDK16Q00536 496 aa13.51□□□□□ -0.25
ATG9A-220ENST00000475339 RBPJQ06330 500 aa13.51□□□□□ -0.25
ATG9A-220ENST00000475339 TPSAB1Q15661 275 aa13.51□□□□□ -0.25
ATG9A-220ENST00000475339 CEBPEQ15744 281 aa13.51□□□□□ -0.25
ATG9A-220ENST00000475339 RPE65Q16518 533 aa13.51□□□□□ -0.25
ATG9A-220ENST00000475339 LONRF1Q17RB8 773 aa13.51□□□□□ -0.25
ATG9A-220ENST00000475339 KHDC1Q4VXA5 237 aaKnown RBP13.51□□□□□ -0.25
ATG9A-220ENST00000475339 ARMC6Q6NXE6 501 aa13.51□□□□□ -0.25
ATG9A-220ENST00000475339 ISLR2Q6UXK2 745 aa13.51□□□□□ -0.25
ATG9A-220ENST00000475339 NLRP9Q7RTR0 991 aa13.51□□□□□ -0.25
ATG9A-220ENST00000475339 TAS2R42Q7RTR8 314 aa13.51□□□□□ -0.25
ATG9A-220ENST00000475339 BIVMQ86UB2 503 aa13.51□□□□□ -0.25
ATG9A-220ENST00000475339 OOSP2Q86WS3 158 aa13.51□□□□□ -0.25
ATG9A-220ENST00000475339 HEXDCQ8WVB3 486 aa13.51□□□□□ -0.25
ATG9A-220ENST00000475339 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.51□□□□□ -0.25
ATG9A-220ENST00000475339 COPS8Q99627 209 aa13.51□□□□□ -0.25
ATG9A-220ENST00000475339 LHPPQ9H008 270 aa13.51□□□□□ -0.25
ATG9A-220ENST00000475339 IFT80Q9P2H3 777 aaPredicted RBP13.51□□□□□ -0.25
ATG9A-220ENST00000475339 NDOR1Q9UHB4 597 aa13.51□□□□□ -0.25
ATG9A-220ENST00000475339 CDYLQ9Y232 598 aa13.51□□□□□ -0.25
ATG9A-220ENST00000475339 TCAF1Q9Y4C2 921 aa13.51□□□□□ -0.25
ATG9A-220ENST00000475339 VPS13CQ709C8 3753 aa13.5□□□□□ -0.25
ATG9A-220ENST00000475339 OR6C74A6NCV1 312 aa13.5□□□□□ -0.25
ATG9A-220ENST00000475339 MROH6A6NGR9 719 aa13.5□□□□□ -0.25
ATG9A-220ENST00000475339 H7C0S8 307 aa13.5□□□□□ -0.25
ATG9A-220ENST00000475339 ARG2P78540 354 aa13.5□□□□□ -0.25
ATG9A-220ENST00000475339 XIAPP98170 497 aa13.5□□□□□ -0.25
ATG9A-220ENST00000475339 CACNG1Q06432 222 aa13.5□□□□□ -0.25
ATG9A-220ENST00000475339 MFAP5Q13361 173 aa13.5□□□□□ -0.25
ATG9A-220ENST00000475339 KCTD19Q17RG1 926 aaPredicted RBP13.5□□□□□ -0.25
ATG9A-220ENST00000475339 GPR33Q49SQ1 333 aa13.5□□□□□ -0.25
ATG9A-220ENST00000475339 TMEM220Q6QAJ8 160 aa13.5□□□□□ -0.25
ATG9A-220ENST00000475339 DET1Q7L5Y6 550 aa13.5□□□□□ -0.25
ATG9A-220ENST00000475339 KLHL7Q8IXQ5 586 aa13.5□□□□□ -0.25
ATG9A-220ENST00000475339 CARFQ8N187 725 aa13.5□□□□□ -0.25
ATG9A-220ENST00000475339 RASGEF1AQ8N9B8 481 aa13.5□□□□□ -0.25
ATG9A-220ENST00000475339 LRRN4CLQ8ND94 238 aa13.5□□□□□ -0.25
ATG9A-220ENST00000475339 CDKN2AIPNLQ96HQ2 116 aa13.5□□□□□ -0.25
ATG9A-220ENST00000475339 RUNDC3BQ96NL0 473 aa13.5□□□□□ -0.25
ATG9A-220ENST00000475339 LMF1Q96S06 567 aa13.5□□□□□ -0.25
ATG9A-220ENST00000475339 IL22Q9GZX6 179 aa13.5□□□□□ -0.25
ATG9A-220ENST00000475339 DDX47Q9H0S4 455 aaKnown RBP13.5□□□□□ -0.25
ATG9A-220ENST00000475339 FAM96AQ9H5X1 160 aa13.5□□□□□ -0.25
ATG9A-220ENST00000475339 SYTL2Q9HCH5 934 aa13.5□□□□□ -0.25
ATG9A-220ENST00000475339 PLA2G3Q9NZ20 509 aa13.5□□□□□ -0.25
ATG9A-220ENST00000475339 ABI3Q9P2A4 366 aa13.5□□□□□ -0.25
ATG9A-220ENST00000475339 ASIC3Q9UHC3 531 aa13.5□□□□□ -0.25
ATG9A-220ENST00000475339 PSMD13Q9UNM6 376 aa13.5□□□□□ -0.25
ATG9A-220ENST00000475339 INTS1Q8N201 2190 aaKnown RBP13.49□□□□□ -0.25
ATG9A-220ENST00000475339 OR2AG2A6NM03 316 aa13.49□□□□□ -0.25
ATG9A-220ENST00000475339 HBQ1P09105 142 aa13.49□□□□□ -0.25
ATG9A-220ENST00000475339 CDH3P22223 829 aa13.49□□□□□ -0.25
ATG9A-220ENST00000475339 PBLDP30039 288 aaPredicted RBP13.49□□□□□ -0.25
ATG9A-220ENST00000475339 NPY2RP49146 381 aa13.49□□□□□ -0.25
ATG9A-220ENST00000475339 PRAMEP78395 509 aa13.49□□□□□ -0.25
ATG9A-220ENST00000475339 FOLH1Q04609 750 aa13.49□□□□□ -0.25
ATG9A-220ENST00000475339 INAQ16352 499 aa13.49□□□□□ -0.25
ATG9A-220ENST00000475339 PCID2Q5JVF3 399 aa13.49□□□□□ -0.25
ATG9A-220ENST00000475339 FNBP1LQ5T0N5 605 aa13.49□□□□□ -0.25
ATG9A-220ENST00000475339 TSTD2Q5T7W7 516 aa13.49□□□□□ -0.25
ATG9A-220ENST00000475339 MRPL14Q6P1L8 145 aaKnown RBP13.49□□□□□ -0.25
ATG9A-220ENST00000475339 LRRC8BQ6P9F7 803 aa13.49□□□□□ -0.25
ATG9A-220ENST00000475339 AFTPHQ6ULP2 937 aa13.49□□□□□ -0.25
ATG9A-220ENST00000475339 C11orf96Q7Z7L8 435 aa13.49□□□□□ -0.25
ATG9A-220ENST00000475339 CREG2Q8IUH2 290 aa13.49□□□□□ -0.25
ATG9A-220ENST00000475339 OR6P1Q8NGX9 317 aa13.49□□□□□ -0.25
ATG9A-220ENST00000475339 ARSGQ96EG1 525 aa13.49□□□□□ -0.25
ATG9A-220ENST00000475339 THOC3Q96J01 351 aaKnown RBP13.49□□□□□ -0.25
ATG9A-220ENST00000475339 TTC1Q99614 292 aa13.49□□□□□ -0.25
ATG9A-220ENST00000475339 GPAMQ9HCL2 828 aa13.49□□□□□ -0.25
ATG9A-220ENST00000475339 RNF14Q9UBS8 474 aa13.49□□□□□ -0.25
ATG9A-220ENST00000475339 MEMO1Q9Y316 297 aa13.49□□□□□ -0.25
ATG9A-220ENST00000475339 CFAP20Q9Y6A4 193 aaKnown RBP13.49□□□□□ -0.25
ATG9A-220ENST00000475339 FBN1P35555 2871 aaKnown RBP13.49□□□□□ -0.25
ATG9A-220ENST00000475339 TRAV17A0A0B4J275 112 aa13.48□□□□□ -0.25
ATG9A-220ENST00000475339 CCDC162PA2VCL2 907 aa13.48□□□□□ -0.25
ATG9A-220ENST00000475339 CCDC188H7C350 402 aa13.48□□□□□ -0.25
ATG9A-220ENST00000475339 KCNJ13O60928 360 aa13.48□□□□□ -0.25
ATG9A-220ENST00000475339 POP7O75817 140 aaKnown RBP13.48□□□□□ -0.25
ATG9A-220ENST00000475339 CD63P08962 238 aa13.48□□□□□ -0.25
ATG9A-220ENST00000475339 POLR2CP19387 275 aaPredicted RBP13.48□□□□□ -0.25
ATG9A-220ENST00000475339 MMP11P24347 488 aa13.48□□□□□ -0.25
ATG9A-220ENST00000475339 ACRV1P26436 265 aa13.48□□□□□ -0.25
ATG9A-220ENST00000475339 MGAT1P26572 445 aa13.48□□□□□ -0.25
ATG9A-220ENST00000475339 TNFSF10P50591 281 aa13.48□□□□□ -0.25
ATG9A-220ENST00000475339 CTSCP53634 463 aa13.48□□□□□ -0.25
ATG9A-220ENST00000475339 ETF1P62495 437 aaKnown RBP13.48□□□□□ -0.25
ATG9A-220ENST00000475339 ADAM8P78325 824 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms