RNA–Protein interactions for RNA: ENST00000475288.5

PCGF3-209, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-209ENST00000475288 HYKKA2RU49 373 aa17.03■□□□□ 0.32
PCGF3-209ENST00000475288 RCCD1A6NED2 376 aa17.03■□□□□ 0.32
PCGF3-209ENST00000475288 PCDH17O14917 1159 aa17.03■□□□□ 0.32
PCGF3-209ENST00000475288 CTSVO60911 334 aa17.03■□□□□ 0.32
PCGF3-209ENST00000475288 JRKO75564 520 aa17.03■□□□□ 0.32
PCGF3-209ENST00000475288 AOAHP28039 575 aa17.03■□□□□ 0.32
PCGF3-209ENST00000475288 SOX11P35716 441 aa17.03■□□□□ 0.32
PCGF3-209ENST00000475288 GRIA3P42263 894 aa17.03■□□□□ 0.32
PCGF3-209ENST00000475288 OR1D4P47884 311 aa17.03■□□□□ 0.32
PCGF3-209ENST00000475288 TDGF1P3P51864 188 aa17.03■□□□□ 0.32
PCGF3-209ENST00000475288 CSE1LP55060 971 aaKnown RBP17.03■□□□□ 0.32
PCGF3-209ENST00000475288 GDF10P55107 478 aa17.03■□□□□ 0.32
PCGF3-209ENST00000475288 OCA2Q04671 838 aa17.03■□□□□ 0.32
PCGF3-209ENST00000475288 KLC1Q07866 573 aa17.03■□□□□ 0.32
PCGF3-209ENST00000475288 ART3Q13508 389 aa17.03■□□□□ 0.32
PCGF3-209ENST00000475288 NAA30Q147X3 362 aaPredicted RBP17.03■□□□□ 0.32
PCGF3-209ENST00000475288 NAA25Q14CX7 972 aa17.03■□□□□ 0.32
PCGF3-209ENST00000475288 AARS2Q5JTZ9 985 aaKnown RBP17.03■□□□□ 0.32
PCGF3-209ENST00000475288 RNF44Q7L0R7 432 aa17.03■□□□□ 0.32
PCGF3-209ENST00000475288 SRRM1Q8IYB3 904 aaKnown RBP17.03■□□□□ 0.32
PCGF3-209ENST00000475288 DNAAF3Q8N9W5 541 aa17.03■□□□□ 0.32
PCGF3-209ENST00000475288 OR52K1Q8NGK4 314 aa17.03■□□□□ 0.32
PCGF3-209ENST00000475288 STT3BQ8TCJ2 826 aa17.03■□□□□ 0.32
PCGF3-209ENST00000475288 ZNF282Q9UDV7 671 aaPredicted RBP17.03■□□□□ 0.32
PCGF3-209ENST00000475288 KLF2Q9Y5W3 355 aaPredicted RBP17.03■□□□□ 0.32
PCGF3-209ENST00000475288 FBN2P35556 2912 aa17.03■□□□□ 0.32
PCGF3-209ENST00000475288 MAP2K7O14733 419 aa17.02■□□□□ 0.32
PCGF3-209ENST00000475288 KLHL18O94889 574 aa17.02■□□□□ 0.32
PCGF3-209ENST00000475288 ZGLP1P0C6A0 271 aa17.02■□□□□ 0.32
PCGF3-209ENST00000475288 PRF1P14222 555 aa17.02■□□□□ 0.32
PCGF3-209ENST00000475288 ADRA1DP25100 572 aa17.02■□□□□ 0.32
PCGF3-209ENST00000475288 TMED2Q15363 201 aa17.02■□□□□ 0.32
PCGF3-209ENST00000475288 FASTKD1Q53R41 847 aaKnown RBP17.02■□□□□ 0.32
PCGF3-209ENST00000475288 WASHC2DQ5SRD0 308 aa17.02■□□□□ 0.32
PCGF3-209ENST00000475288 SP5Q6BEB4 398 aaPredicted RBP17.02■□□□□ 0.32
PCGF3-209ENST00000475288 TTC23LQ6PF05 361 aa17.02■□□□□ 0.32
PCGF3-209ENST00000475288 SHISA6Q6ZSJ9 500 aa17.02■□□□□ 0.32
PCGF3-209ENST00000475288 KBTBD2Q8IY47 623 aa17.02■□□□□ 0.32
PCGF3-209ENST00000475288 RAB42Q8N4Z0 105 aa17.02■□□□□ 0.32
PCGF3-209ENST00000475288 C2orf73Q8N5S3 287 aaPredicted RBP17.02■□□□□ 0.32
PCGF3-209ENST00000475288 LKAAEAR1Q8TD35 194 aa17.02■□□□□ 0.32
PCGF3-209ENST00000475288 NR4A3Q92570 626 aa17.02■□□□□ 0.32
PCGF3-209ENST00000475288 HAS2Q92819 552 aa17.02■□□□□ 0.32
PCGF3-209ENST00000475288 MIEF2Q96C03 454 aa17.02■□□□□ 0.32
PCGF3-209ENST00000475288 MVB12AQ96EY5 273 aa17.02■□□□□ 0.32
PCGF3-209ENST00000475288 IL17FQ96PD4 163 aa17.02■□□□□ 0.32
PCGF3-209ENST00000475288 TMEM121Q9BTD3 319 aa17.02■□□□□ 0.32
PCGF3-209ENST00000475288 ZNF160Q9HCG1 818 aa17.02■□□□□ 0.32
PCGF3-209ENST00000475288 COPG2Q9UBF2 871 aa17.02■□□□□ 0.32
PCGF3-209ENST00000475288 SLC2A6Q9UGQ3 507 aa17.02■□□□□ 0.32
PCGF3-209ENST00000475288 DUSP10Q9Y6W6 482 aa17.02■□□□□ 0.32
PCGF3-209ENST00000475288 CSMD2Q7Z408 3487 aa17.01■□□□□ 0.31
PCGF3-209ENST00000475288 TRAV17A0A0B4J275 112 aa17.01■□□□□ 0.31
PCGF3-209ENST00000475288 ARHGAP10A1A4S6 786 aa17.01■□□□□ 0.31
PCGF3-209ENST00000475288 DYTNA2CJ06 578 aa17.01■□□□□ 0.31
PCGF3-209ENST00000475288 GRID2IPA4D2P6 1211 aa17.01■□□□□ 0.31
PCGF3-209ENST00000475288 MIF4GDA9UHW6 222 aaKnown RBP17.01■□□□□ 0.31
PCGF3-209ENST00000475288 PRMT5O14744 637 aaPredicted RBP17.01■□□□□ 0.31
PCGF3-209ENST00000475288 KPNA5O15131 536 aa17.01■□□□□ 0.31
PCGF3-209ENST00000475288 PHF2O75151 1096 aa17.01■□□□□ 0.31
PCGF3-209ENST00000475288 IPO7O95373 1038 aaKnown RBP17.01■□□□□ 0.31
PCGF3-209ENST00000475288 MED26O95402 600 aa17.01■□□□□ 0.31
PCGF3-209ENST00000475288 PTMAP06454 111 aaKnown RBP17.01■□□□□ 0.31
PCGF3-209ENST00000475288 STIP1P31948 543 aaKnown RBP17.01■□□□□ 0.31
PCGF3-209ENST00000475288 FDFT1P37268 417 aa17.01■□□□□ 0.31
PCGF3-209ENST00000475288 TTPAP49638 278 aa17.01■□□□□ 0.31
PCGF3-209ENST00000475288 TNFSF10P50591 281 aa17.01■□□□□ 0.31
PCGF3-209ENST00000475288 NAP1L1P55209 391 aaKnown RBP17.01■□□□□ 0.31
PCGF3-209ENST00000475288 VSX2P58304 361 aaPredicted RBP17.01■□□□□ 0.31
PCGF3-209ENST00000475288 ARG2P78540 354 aa17.01■□□□□ 0.31
PCGF3-209ENST00000475288 MUM1Q2TAK8 710 aa17.01■□□□□ 0.31
PCGF3-209ENST00000475288 LINC00696Q6ZRV3 163 aa17.01■□□□□ 0.31
PCGF3-209ENST00000475288 RIPOR1Q6ZS17 1223 aa17.01■□□□□ 0.31
PCGF3-209ENST00000475288 NDUFAF7Q7L592 441 aa17.01■□□□□ 0.31
PCGF3-209ENST00000475288 TAX1BP1Q86VP1 789 aa17.01■□□□□ 0.31
PCGF3-209ENST00000475288 FJX1Q86VR8 437 aa17.01■□□□□ 0.31
PCGF3-209ENST00000475288 UBL4BQ8N7F7 174 aa17.01■□□□□ 0.31
PCGF3-209ENST00000475288 CATSPER1Q8NEC5 780 aa17.01■□□□□ 0.31
PCGF3-209ENST00000475288 OR2L3Q8NG85 312 aa17.01■□□□□ 0.31
PCGF3-209ENST00000475288 CFAP61Q8NHU2 1237 aa17.01■□□□□ 0.31
PCGF3-209ENST00000475288 PSMF1Q92530 271 aa17.01■□□□□ 0.31
PCGF3-209ENST00000475288 PANX3Q96QZ0 392 aa17.01■□□□□ 0.31
PCGF3-209ENST00000475288 RNF32Q9H0A6 362 aa17.01■□□□□ 0.31
PCGF3-209ENST00000475288 TSPY26PQ9H489 355 aa17.01■□□□□ 0.31
PCGF3-209ENST00000475288 AMFRQ9UKV5 643 aa17.01■□□□□ 0.31
PCGF3-209ENST00000475288 PDZD2O15018 2839 aa17.01■□□□□ 0.31
PCGF3-209ENST00000475288 PRSS44E7EML9 344 aa17■□□□□ 0.31
PCGF3-209ENST00000475288 C1orf105O95561 183 aa17■□□□□ 0.31
PCGF3-209ENST00000475288 PRR35P0CG20 571 aa17■□□□□ 0.31
PCGF3-209ENST00000475288 COX6A1P12074 109 aa17■□□□□ 0.31
PCGF3-209ENST00000475288 CCNFP41002 786 aa17■□□□□ 0.31
PCGF3-209ENST00000475288 PRAMEP78395 509 aa17■□□□□ 0.31
PCGF3-209ENST00000475288 SEMA3AQ14563 771 aa17■□□□□ 0.31
PCGF3-209ENST00000475288 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17■□□□□ 0.31
PCGF3-209ENST00000475288 FRMPD2BQ6IN97 320 aa17■□□□□ 0.31
PCGF3-209ENST00000475288 LRRC6Q86X45 466 aa17■□□□□ 0.31
PCGF3-209ENST00000475288 MCEMP1Q8IX19 187 aa17■□□□□ 0.31
PCGF3-209ENST00000475288 METTL27Q8N6F8 245 aaPredicted RBP17■□□□□ 0.31
PCGF3-209ENST00000475288 OR1N1Q8NGS0 311 aa17■□□□□ 0.31
PCGF3-209ENST00000475288 OR2A1Q8NGT9 310 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms