RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 FABP12A6NFH5 140 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 CXorf49A8MYA2 514 aaPredicted RBP10.72□□□□□ -0.69
VAPB-204ENST00000475243 EFCAB9A8MZ26 197 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 EIF1AYO14602 144 aaKnown RBP10.72□□□□□ -0.69
VAPB-204ENST00000475243 CBFA2T3O75081 653 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 CLPXO76031 633 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 PGAM2P15259 253 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 ENGP17813 658 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 CBLP22681 906 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 XKP51811 444 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 DGKQP52824 942 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 MSL3Q8N5Y2 521 aaKnown RBP10.72□□□□□ -0.69
VAPB-204ENST00000475243 RASGEF1AQ8N9B8 481 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 HCAR2Q8TDS4 363 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 RGMAQ96B86 450 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 DMRTB1Q96MA1 342 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 POLR2J2Q9GZM3 115 aaKnown RBP10.72□□□□□ -0.69
VAPB-204ENST00000475243 ZNF221Q9UK13 617 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 FZD4Q9ULV1 537 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 ERI3O43414 337 aaKnown RBP10.72□□□□□ -0.69
VAPB-204ENST00000475243 AP3S2P59780 193 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 TLE2Q04725 743 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 PTP4A2Q12974 167 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 ENPP2Q13822 863 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 ADGRF1Q5T601 910 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 SETD7Q8WTS6 366 aaKnown RBP10.72□□□□□ -0.69
VAPB-204ENST00000475243 AKTIPQ9H8T0 292 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 WNT6Q9Y6F9 365 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 PDLIM1O00151 329 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 PITPNM1O00562 1244 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 ECI2O75521 394 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 OR7A10O76100 309 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 CCNOP22674 350 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 CXCR1P25024 350 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 HSD11B1P28845 292 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 MAP3K8P41279 467 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 DNASE1L3Q13609 305 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 GRM2Q14416 872 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 TXNRD3NBQ6F5E7 133 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 HFE2Q6ZVN8 426 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 DNAJA4Q8WW22 397 aaPredicted RBP10.72□□□□□ -0.69
VAPB-204ENST00000475243 CCDC59Q9P031 241 aaKnown RBP10.72□□□□□ -0.69
VAPB-204ENST00000475243 POMPQ9Y244 141 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 WASF2Q9Y6W5 498 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 TMEM233B4DJY2 109 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 DNM1LO00429 736 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 ADAMTS3O15072 1205 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 C8orf89P0DMQ9 161 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 TYRP1P17643 537 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 BDKRB1P46663 353 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 DPYSL2Q16555 572 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 EIPR1Q53HC9 387 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 PRAMEF14Q5SWL7 426 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 PRPF38BQ5VTL8 546 aaKnown RBP10.72□□□□□ -0.69
VAPB-204ENST00000475243 PRAMEF13Q5VWM6 474 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 DGLUCYQ7Z3D6 616 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 AMIGO1Q86WK6 493 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 XPNPEP1Q9NQW7 623 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 ZDHHC3Q9NYG2 299 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 UBR1Q8IWV7 1749 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 PRKD1Q15139 912 aaPredicted RBP10.72□□□□□ -0.69
VAPB-204ENST00000475243 RPS27LQ71UM5 84 aaKnown RBP10.72□□□□□ -0.69
VAPB-204ENST00000475243 IFNL1Q8IU54 200 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 PROKR2Q8NFJ6 384 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 SLC22A17Q8WUG5 538 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 NCSTNQ92542 709 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 GAL3ST3Q96A11 431 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 DNAJA3Q96EY1 480 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 ZNF347Q96SE7 839 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 MNTQ99583 582 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 POLR2J3Q9H1A7 115 aaKnown RBP10.72□□□□□ -0.69
VAPB-204ENST00000475243 MGAT4AQ9UM21 535 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 FAM234BA2RU67 622 aa10.71□□□□□ -0.69
VAPB-204ENST00000475243 CLIC1O00299 241 aa10.71□□□□□ -0.69
VAPB-204ENST00000475243 BCHEP06276 602 aa10.71□□□□□ -0.69
VAPB-204ENST00000475243 GDF5P43026 501 aa10.71□□□□□ -0.69
VAPB-204ENST00000475243 CTU1Q7Z7A3 348 aaKnown RBP10.71□□□□□ -0.69
VAPB-204ENST00000475243 SYVN1Q86TM6 617 aa10.71□□□□□ -0.69
VAPB-204ENST00000475243 C2orf15Q8WU43 125 aaKnown RBP10.71□□□□□ -0.69
VAPB-204ENST00000475243 LGR4Q9BXB1 951 aa10.71□□□□□ -0.69
VAPB-204ENST00000475243 CADM1Q9BY67 442 aaKnown RBP10.71□□□□□ -0.69
VAPB-204ENST00000475243 LDAHQ9H6V9 325 aa10.71□□□□□ -0.69
VAPB-204ENST00000475243 CXorf21Q9HAI6 301 aa10.71□□□□□ -0.69
VAPB-204ENST00000475243 C12orf4Q9NQ89 552 aa10.71□□□□□ -0.69
VAPB-204ENST00000475243 RBPJLQ9UBG7 517 aa10.71□□□□□ -0.69
VAPB-204ENST00000475243 SLC2A6Q9UGQ3 507 aa10.71□□□□□ -0.69
VAPB-204ENST00000475243 TAC3Q9UHF0 121 aa10.71□□□□□ -0.69
VAPB-204ENST00000475243 MYH1P12882 1939 aa10.71□□□□□ -0.69
VAPB-204ENST00000475243 MYH4Q9Y623 1939 aa10.71□□□□□ -0.69
VAPB-204ENST00000475243 IRAK2O43187 625 aa10.71□□□□□ -0.69
VAPB-204ENST00000475243 SERPINA3P01011 423 aa10.71□□□□□ -0.69
VAPB-204ENST00000475243 CCNFP41002 786 aa10.71□□□□□ -0.69
VAPB-204ENST00000475243 PNLIPRP1P54315 467 aa10.71□□□□□ -0.69
VAPB-204ENST00000475243 RASGEF1BQ0VAM2 473 aa10.71□□□□□ -0.69
VAPB-204ENST00000475243 FBXL22Q6P050 247 aa10.71□□□□□ -0.69
VAPB-204ENST00000475243 SVOPLQ8N434 492 aa10.71□□□□□ -0.69
VAPB-204ENST00000475243 BANPQ8N9N5 519 aa10.71□□□□□ -0.69
VAPB-204ENST00000475243 SIPA1Q96FS4 1042 aa10.71□□□□□ -0.69
VAPB-204ENST00000475243 UCKL1Q9NWZ5 548 aa10.71□□□□□ -0.69
VAPB-204ENST00000475243 IGSF9Q9P2J2 1179 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms