RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 HLA-DPA1P20036 260 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 POU3F2P20265 443 aaPredicted RBP4.75□□□□□ -1.65
NPHP3-206ENST00000474871 CNR1P21554 472 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 AVPR2P30518 371 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 GJC1P36383 396 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 NAMPTP43490 491 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 GNPDA1P46926 289 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 ACOT2P49753 483 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 COPZ1P61923 177 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 SEMA5AQ13591 1074 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 RBMS2Q15434 407 aaKnown RBP4.75□□□□□ -1.65
NPHP3-206ENST00000474871 HIKESHIQ53FT3 197 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 TRIM61Q5EBN2 209 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 RIPPLY2Q5TAB7 128 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 DDI2Q5TDH0 399 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 MFSD5Q6N075 450 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 ADGRD2Q7Z7M1 963 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 MFSD4AQ8N468 514 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 CCDC197Q8NCU1 140 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 SLC7A14Q8TBB6 771 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 FAM174AQ8TBP5 190 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 LRRC20Q8TCA0 184 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 PAQR8Q8TEZ7 354 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 FBXL8Q96CD0 374 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 DIRC2Q96SL1 478 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 IL12RB2Q99665 862 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 MED10Q9BTT4 135 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 RPF2Q9H7B2 306 aaKnown RBP4.75□□□□□ -1.65
NPHP3-206ENST00000474871 GDF3Q9NR23 364 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 ABCD2Q9UBJ2 740 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 KCNU1A8MYU2 1149 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 ARHGAP6O43182 974 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 PPIHO43447 177 aaKnown RBP4.75□□□□□ -1.65
NPHP3-206ENST00000474871 DDAH1O94760 285 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 TTLL1O95922 423 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 TPOP07202 933 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 F8A1P23610 371 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 CRATP43155 626 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 CDC34P49427 236 aaPredicted RBP4.75□□□□□ -1.65
NPHP3-206ENST00000474871 CHN2P52757 468 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 C21orf59P57076 290 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 HERVK_113P62684 666 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 ERVK-24P63145 666 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 CDC42EP1Q00587 391 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 RPA4Q13156 261 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 DUSP8Q13202 625 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 PDK1Q15118 436 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 SSX2Q16385 188 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 GXYLT1Q4G148 440 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 LGSNQ5TDP6 509 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 MRM1Q6IN84 353 aaKnown RBP4.75□□□□□ -1.65
NPHP3-206ENST00000474871 DPPA2Q7Z7J5 298 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 CROCCP2Q86T23 111 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 FAM35AQ86V20 835 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 VWA5B2Q8N398 1253 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 TMEM102Q8N9M5 508 aaPredicted RBP4.75□□□□□ -1.65
NPHP3-206ENST00000474871 OR6J1Q8NGC5 347 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 DLG3Q92796 817 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 APBB2Q92870 758 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 ISG20Q96AZ6 181 aaKnown RBP4.75□□□□□ -1.65
NPHP3-206ENST00000474871 R3HDM4Q96D70 268 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 HSFY1Q96LI6 401 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 SORT1Q99523 831 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 SLC30A3Q99726 388 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 GJB4Q9NTQ9 266 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 C20orf96Q9NUD7 363 aaPredicted RBP4.75□□□□□ -1.65
NPHP3-206ENST00000474871 CD274Q9NZQ7 290 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 RBPJLQ9UBG7 517 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 MORF4L1Q9UBU8 362 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 LHX6Q9UPM6 363 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 TNFRSF18Q9Y5U5 241 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 OTOFQ9HC10 1997 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 UBE2Q2LH0YL09 131 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 K7ESF4 209 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 FZD7O75084 574 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 SLC22A5O76082 557 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 INHBAP08476 426 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 CYC1P08574 325 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 ZDHHC11BP0C7U3 371 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 BMP3P12645 472 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 ADPRHP54922 357 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 EIF3BP55884 814 aaKnown RBP4.75□□□□□ -1.65
NPHP3-206ENST00000474871 GAS6Q14393 721 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 FAM189A2Q15884 450 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 MICBQ29980 383 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 PAPD7Q5XG87 772 aaKnown RBP4.75□□□□□ -1.65
NPHP3-206ENST00000474871 SLC25A25Q6KCM7 469 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 TTC33Q6PID6 262 aaPredicted RBP4.75□□□□□ -1.65
NPHP3-206ENST00000474871 RFX6Q8HWS3 928 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 MISPQ8IVT2 679 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 CMTR2Q8IYT2 770 aaKnown RBP4.75□□□□□ -1.65
NPHP3-206ENST00000474871 POU5F2Q8N7G0 328 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 FAM156AQ8NDB6 213 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 PARK7Q99497 189 aaKnown RBP4.75□□□□□ -1.65
NPHP3-206ENST00000474871 B3GNT2Q9NY97 397 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 WNT16Q9UBV4 365 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 NDOR1Q9UHB4 597 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 ZDHHC8Q9ULC8 765 aa4.75□□□□□ -1.65
NPHP3-206ENST00000474871 SNED1Q8TER0 1413 aa4.74□□□□□ -1.65
NPHP3-206ENST00000474871 A0A1W2PRB8 838 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms