RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 PRDX1Q06830 199 aaKnown RBP16.31■□□□□ 0.2
SCAF11-206ENST00000474828 BMPR2Q13873 1038 aa16.31■□□□□ 0.2
SCAF11-206ENST00000474828 TSNQ15631 228 aaKnown RBP16.31■□□□□ 0.2
SCAF11-206ENST00000474828 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.31■□□□□ 0.2
SCAF11-206ENST00000474828 DCAF12Q5T6F0 453 aa16.31■□□□□ 0.2
SCAF11-206ENST00000474828 FBXO38Q6PIJ6 1188 aa16.31■□□□□ 0.2
SCAF11-206ENST00000474828 AGTRAPQ6RW13 159 aa16.31■□□□□ 0.2
SCAF11-206ENST00000474828 CEACAM20Q6UY09 585 aa16.31■□□□□ 0.2
SCAF11-206ENST00000474828 ISCA2Q86U28 154 aa16.31■□□□□ 0.2
SCAF11-206ENST00000474828 DNAJC22Q8N4W6 341 aa16.31■□□□□ 0.2
SCAF11-206ENST00000474828 C19orf47Q8N9M1 422 aaKnown RBP16.31■□□□□ 0.2
SCAF11-206ENST00000474828 RHEBL1Q8TAI7 183 aa16.31■□□□□ 0.2
SCAF11-206ENST00000474828 MZB1Q8WU39 189 aa16.31■□□□□ 0.2
SCAF11-206ENST00000474828 USP7Q93009 1102 aa16.31■□□□□ 0.2
SCAF11-206ENST00000474828 PMEPA1Q969W9 287 aa16.31■□□□□ 0.2
SCAF11-206ENST00000474828 PTERQ96BW5 349 aa16.31■□□□□ 0.2
SCAF11-206ENST00000474828 MTBPQ96DY7 904 aa16.31■□□□□ 0.2
SCAF11-206ENST00000474828 ZNF285Q96NJ3 590 aa16.31■□□□□ 0.2
SCAF11-206ENST00000474828 FAM60AQ9NP50 221 aa16.31■□□□□ 0.2
SCAF11-206ENST00000474828 PDE7BQ9NP56 450 aa16.31■□□□□ 0.2
SCAF11-206ENST00000474828 SLC39A1Q9NY26 324 aa16.31■□□□□ 0.2
SCAF11-206ENST00000474828 ANKMY1Q9P2S6 941 aa16.31■□□□□ 0.2
SCAF11-206ENST00000474828 CTNNAL1Q9UBT7 734 aa16.31■□□□□ 0.2
SCAF11-206ENST00000474828 ACOT9Q9Y305 439 aa16.31■□□□□ 0.2
SCAF11-206ENST00000474828 TMEM184BQ9Y519 407 aaPredicted RBP16.31■□□□□ 0.2
SCAF11-206ENST00000474828 PCDHB11Q9Y5F2 797 aa16.31■□□□□ 0.2
SCAF11-206ENST00000474828 CELSR3Q9NYQ7 3312 aa16.3■□□□□ 0.2
SCAF11-206ENST00000474828 LAMA5O15230 3695 aa16.3■□□□□ 0.2
SCAF11-206ENST00000474828 IGKV1-8A0A0C4DH67 115 aa16.3■□□□□ 0.2
SCAF11-206ENST00000474828 OR2A25A4D2G3 310 aa16.3■□□□□ 0.2
SCAF11-206ENST00000474828 POLR1CO15160 346 aaPredicted RBP16.3■□□□□ 0.2
SCAF11-206ENST00000474828 PRAMEF10O60809 474 aa16.3■□□□□ 0.2
SCAF11-206ENST00000474828 SNRPAP09012 282 aaKnown RBP16.3■□□□□ 0.2
SCAF11-206ENST00000474828 HIST1H2AGP0C0S8 130 aaPredicted RBP16.3■□□□□ 0.2
SCAF11-206ENST00000474828 EBLN1P0CF75 366 aa16.3■□□□□ 0.2
SCAF11-206ENST00000474828 COL6A2P12110 1019 aa16.3■□□□□ 0.2
SCAF11-206ENST00000474828 PVRP15151 417 aa16.3■□□□□ 0.2
SCAF11-206ENST00000474828 HIST1H2ADP20671 130 aa16.3■□□□□ 0.2
SCAF11-206ENST00000474828 CCND1P24385 295 aa16.3■□□□□ 0.2
SCAF11-206ENST00000474828 HSD17B3P37058 310 aa16.3■□□□□ 0.2
SCAF11-206ENST00000474828 GRIA3P42263 894 aa16.3■□□□□ 0.2
SCAF11-206ENST00000474828 HNMTP50135 292 aa16.3■□□□□ 0.2
SCAF11-206ENST00000474828 ABATP80404 500 aa16.3■□□□□ 0.2
SCAF11-206ENST00000474828 NAA25Q14CX7 972 aa16.3■□□□□ 0.2
SCAF11-206ENST00000474828 TMEM164Q5U3C3 297 aa16.3■□□□□ 0.2
SCAF11-206ENST00000474828 KIAA1614Q5VZ46 1190 aa16.3■□□□□ 0.2
SCAF11-206ENST00000474828 FCRL6Q6DN72 434 aa16.3■□□□□ 0.2
SCAF11-206ENST00000474828 ZNF425Q6IV72 752 aa16.3■□□□□ 0.2
SCAF11-206ENST00000474828 CDHR3Q6ZTQ4 885 aa16.3■□□□□ 0.2
SCAF11-206ENST00000474828 TAOK1Q7L7X3 1001 aa16.3■□□□□ 0.2
SCAF11-206ENST00000474828 TRIM73Q86UV7 250 aa16.3■□□□□ 0.2
SCAF11-206ENST00000474828 FAM129CQ86XR2 697 aa16.3■□□□□ 0.2
SCAF11-206ENST00000474828 UHMK1Q8TAS1 419 aaKnown RBP16.3■□□□□ 0.2
SCAF11-206ENST00000474828 ATL1Q8WXF7 558 aa16.3■□□□□ 0.2
SCAF11-206ENST00000474828 HIST1H2AHQ96KK5 128 aa16.3■□□□□ 0.2
SCAF11-206ENST00000474828 HIST1H2AJQ99878 128 aa16.3■□□□□ 0.2
SCAF11-206ENST00000474828 H2AFJQ9BTM1 129 aa16.3■□□□□ 0.2
SCAF11-206ENST00000474828 TRIM54Q9BYV2 358 aa16.3■□□□□ 0.2
SCAF11-206ENST00000474828 PCBD2Q9H0N5 130 aa16.3■□□□□ 0.2
SCAF11-206ENST00000474828 NMRAL1Q9HBL8 299 aa16.3■□□□□ 0.2
SCAF11-206ENST00000474828 APMAPQ9HDC9 416 aa16.3■□□□□ 0.2
SCAF11-206ENST00000474828 FGF21Q9NSA1 209 aa16.3■□□□□ 0.2
SCAF11-206ENST00000474828 ARL15Q9NXU5 204 aa16.3■□□□□ 0.2
SCAF11-206ENST00000474828 FOXJ2Q9P0K8 574 aa16.3■□□□□ 0.2
SCAF11-206ENST00000474828 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.3■□□□□ 0.2
SCAF11-206ENST00000474828 B3GALT1Q9Y5Z6 326 aa16.3■□□□□ 0.2
SCAF11-206ENST00000474828 IKBKGQ9Y6K9 419 aa16.3■□□□□ 0.2
SCAF11-206ENST00000474828 V9GYY5 206 aaPredicted RBP16.3■□□□□ 0.2
SCAF11-206ENST00000474828 CFAP47Q6ZTR5 3102 aa16.3■□□□□ 0.2
SCAF11-206ENST00000474828 A0A096LPK6 155 aa16.29■□□□□ 0.2
SCAF11-206ENST00000474828 NPEPPSL1A6NEC2 478 aa16.29■□□□□ 0.2
SCAF11-206ENST00000474828 POC1B-GALNT4F8VUJ3 575 aa16.29■□□□□ 0.2
SCAF11-206ENST00000474828 RFPL1O75677 317 aa16.29■□□□□ 0.2
SCAF11-206ENST00000474828 DLGAP3O95886 979 aa16.29■□□□□ 0.2
SCAF11-206ENST00000474828 LTA4HP09960 611 aaKnown RBP16.29■□□□□ 0.2
SCAF11-206ENST00000474828 MAGP20916 626 aa16.29■□□□□ 0.2
SCAF11-206ENST00000474828 PSMB5P28074 263 aa16.29■□□□□ 0.2
SCAF11-206ENST00000474828 GCGRP47871 477 aa16.29■□□□□ 0.2
SCAF11-206ENST00000474828 KCNC1P48547 511 aa16.29■□□□□ 0.2
SCAF11-206ENST00000474828 MAP7Q14244 749 aa16.29■□□□□ 0.2
SCAF11-206ENST00000474828 TGFBIQ15582 683 aa16.29■□□□□ 0.2
SCAF11-206ENST00000474828 OR4D1Q15615 310 aa16.29■□□□□ 0.2
SCAF11-206ENST00000474828 SF1Q15637 639 aaKnown RBP16.29■□□□□ 0.2
SCAF11-206ENST00000474828 TMTC4Q5T4D3 741 aa16.29■□□□□ 0.2
SCAF11-206ENST00000474828 LGSNQ5TDP6 509 aa16.29■□□□□ 0.2
SCAF11-206ENST00000474828 ICE2Q659A1 982 aa16.29■□□□□ 0.2
SCAF11-206ENST00000474828 MBOAT1Q6ZNC8 495 aa16.29■□□□□ 0.2
SCAF11-206ENST00000474828 SYTL1Q8IYJ3 562 aa16.29■□□□□ 0.2
SCAF11-206ENST00000474828 C2orf73Q8N5S3 287 aaPredicted RBP16.29■□□□□ 0.2
SCAF11-206ENST00000474828 PDPRQ8NCN5 879 aa16.29■□□□□ 0.2
SCAF11-206ENST00000474828 OR6C1Q96RD1 312 aa16.29■□□□□ 0.2
SCAF11-206ENST00000474828 ATOH8Q96SQ7 321 aa16.29■□□□□ 0.2
SCAF11-206ENST00000474828 INTS7Q9NVH2 962 aaKnown RBP16.29■□□□□ 0.2
SCAF11-206ENST00000474828 PILRAQ9UKJ1 303 aa16.29■□□□□ 0.2
SCAF11-206ENST00000474828 ZMIZ1Q9ULJ6 1067 aa16.29■□□□□ 0.2
SCAF11-206ENST00000474828 APC2O95996 2303 aa16.29■□□□□ 0.2
SCAF11-206ENST00000474828 A0A087WV48 116 aa16.28■□□□□ 0.2
SCAF11-206ENST00000474828 KERAO60938 352 aa16.28■□□□□ 0.2
SCAF11-206ENST00000474828 KLHL2O95198 593 aa16.28■□□□□ 0.2
SCAF11-206ENST00000474828 SYF2O95926 243 aaKnown RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms