RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 STSP08842 583 aa13.38□□□□□ -0.27
CCDC78-209ENST00000474647 POU3F2P20265 443 aaPredicted RBP13.38□□□□□ -0.27
CCDC78-209ENST00000474647 PSMB5P28074 263 aa13.38□□□□□ -0.27
CCDC78-209ENST00000474647 CCR7P32248 378 aa13.38□□□□□ -0.27
CCDC78-209ENST00000474647 GDF10P55107 478 aa13.38□□□□□ -0.27
CCDC78-209ENST00000474647 OCA2Q04671 838 aa13.38□□□□□ -0.27
CCDC78-209ENST00000474647 KLC1Q07866 573 aa13.38□□□□□ -0.27
CCDC78-209ENST00000474647 GTF3C1Q12789 2109 aa13.38□□□□□ -0.27
CCDC78-209ENST00000474647 AFTPHQ6ULP2 937 aa13.38□□□□□ -0.27
CCDC78-209ENST00000474647 TMEM139Q8IV31 216 aa13.38□□□□□ -0.27
CCDC78-209ENST00000474647 KLHDC8BQ8IXV7 354 aa13.38□□□□□ -0.27
CCDC78-209ENST00000474647 DNAAF3Q8N9W5 541 aa13.38□□□□□ -0.27
CCDC78-209ENST00000474647 OR52K1Q8NGK4 314 aa13.38□□□□□ -0.27
CCDC78-209ENST00000474647 OR2L8Q8NGY9 312 aa13.38□□□□□ -0.27
CCDC78-209ENST00000474647 LKAAEAR1Q8TD35 194 aa13.38□□□□□ -0.27
CCDC78-209ENST00000474647 ASZ1Q8WWH4 475 aa13.38□□□□□ -0.27
CCDC78-209ENST00000474647 MIEF2Q96C03 454 aa13.38□□□□□ -0.27
CCDC78-209ENST00000474647 MENTQ9BUN1 341 aa13.38□□□□□ -0.27
CCDC78-209ENST00000474647 RUBCNLQ9H714 662 aa13.38□□□□□ -0.27
CCDC78-209ENST00000474647 ZNF304Q9HCX3 659 aa13.38□□□□□ -0.27
CCDC78-209ENST00000474647 PTGFRNQ9P2B2 879 aa13.38□□□□□ -0.27
CCDC78-209ENST00000474647 FAM169AQ9Y6X4 670 aa13.38□□□□□ -0.27
CCDC78-209ENST00000474647 C2CD3Q4AC94 2353 aa13.37□□□□□ -0.27
CCDC78-209ENST00000474647 A0A0J9YVX5 310 aa13.37□□□□□ -0.27
CCDC78-209ENST00000474647 HYKKA2RU49 373 aa13.37□□□□□ -0.27
CCDC78-209ENST00000474647 GOLGA6L9A6NEM1 432 aa13.37□□□□□ -0.27
CCDC78-209ENST00000474647 VSTM2BA6NLU5 285 aa13.37□□□□□ -0.27
CCDC78-209ENST00000474647 IQCF5A8MTL0 148 aa13.37□□□□□ -0.27
CCDC78-209ENST00000474647 RASGRF2O14827 1237 aa13.37□□□□□ -0.27
CCDC78-209ENST00000474647 ONECUT2O95948 504 aa13.37□□□□□ -0.27
CCDC78-209ENST00000474647 GAS8O95995 478 aa13.37□□□□□ -0.27
CCDC78-209ENST00000474647 F10P00742 488 aa13.37□□□□□ -0.27
CCDC78-209ENST00000474647 EIF2S1P05198 315 aaKnown RBP13.37□□□□□ -0.27
CCDC78-209ENST00000474647 APOA4P06727 396 aa13.37□□□□□ -0.27
CCDC78-209ENST00000474647 GRNP28799 593 aaKnown RBP13.37□□□□□ -0.27
CCDC78-209ENST00000474647 CARSP49589 748 aaKnown RBP13.37□□□□□ -0.27
CCDC78-209ENST00000474647 EEF1A2Q05639 463 aaKnown RBP13.37□□□□□ -0.27
CCDC78-209ENST00000474647 FAM214AQ32MH5 1076 aa13.37□□□□□ -0.27
CCDC78-209ENST00000474647 WASHC2DQ5SRD0 308 aa13.37□□□□□ -0.27
CCDC78-209ENST00000474647 FRMPD2BQ6IN97 320 aa13.37□□□□□ -0.27
CCDC78-209ENST00000474647 UNC5DQ6UXZ4 953 aa13.37□□□□□ -0.27
CCDC78-209ENST00000474647 LINC00523Q86TU6 105 aa13.37□□□□□ -0.27
CCDC78-209ENST00000474647 KBTBD2Q8IY47 623 aa13.37□□□□□ -0.27
CCDC78-209ENST00000474647 KRT222Q8N1A0 295 aa13.37□□□□□ -0.27
CCDC78-209ENST00000474647 SIRT6Q8N6T7 355 aa13.37□□□□□ -0.27
CCDC78-209ENST00000474647 OR13J1Q8NGT2 312 aa13.37□□□□□ -0.27
CCDC78-209ENST00000474647 OR6P1Q8NGX9 317 aa13.37□□□□□ -0.27
CCDC78-209ENST00000474647 STT3BQ8TCJ2 826 aa13.37□□□□□ -0.27
CCDC78-209ENST00000474647 SKA2Q8WVK7 121 aaPredicted RBP13.37□□□□□ -0.27
CCDC78-209ENST00000474647 HDAC10Q969S8 669 aa13.37□□□□□ -0.27
CCDC78-209ENST00000474647 RAB11FIP5Q9BXF6 653 aa13.37□□□□□ -0.27
CCDC78-209ENST00000474647 PLA2G3Q9NZ20 509 aa13.37□□□□□ -0.27
CCDC78-209ENST00000474647 IL1RAPL1Q9NZN1 696 aa13.37□□□□□ -0.27
CCDC78-209ENST00000474647 ZNF282Q9UDV7 671 aaPredicted RBP13.37□□□□□ -0.27
CCDC78-209ENST00000474647 SLC2A6Q9UGQ3 507 aa13.37□□□□□ -0.27
CCDC78-209ENST00000474647 ZC3H7BQ9UGR2 993 aaKnown RBP13.37□□□□□ -0.27
CCDC78-209ENST00000474647 SH3BGRL2Q9UJC5 107 aa13.37□□□□□ -0.27
CCDC78-209ENST00000474647 C3orf18Q9UK00 162 aa13.37□□□□□ -0.27
CCDC78-209ENST00000474647 POLQO75417 2590 aa13.37□□□□□ -0.27
CCDC78-209ENST00000474647 F8P00451 2351 aa13.36□□□□□ -0.27
CCDC78-209ENST00000474647 NSG1A0A0A6YYJ2 146 aa13.36□□□□□ -0.27
CCDC78-209ENST00000474647 TRGV8A0A0C4DH27 118 aa13.36□□□□□ -0.27
CCDC78-209ENST00000474647 HEATR9A2RTY3 570 aa13.36□□□□□ -0.27
CCDC78-209ENST00000474647 KRT87PA6NCN2 255 aa13.36□□□□□ -0.27
CCDC78-209ENST00000474647 PSMD3O43242 534 aa13.36□□□□□ -0.27
CCDC78-209ENST00000474647 NRP2O60462 931 aa13.36□□□□□ -0.27
CCDC78-209ENST00000474647 CTSVO60911 334 aa13.36□□□□□ -0.27
CCDC78-209ENST00000474647 USP1O94782 785 aa13.36□□□□□ -0.27
CCDC78-209ENST00000474647 MED26O95402 600 aa13.36□□□□□ -0.27
CCDC78-209ENST00000474647 SNRPB2P08579 225 aaKnown RBP13.36□□□□□ -0.27
CCDC78-209ENST00000474647 ZGLP1P0C6A0 271 aa13.36□□□□□ -0.27
CCDC78-209ENST00000474647 ERVK-10P10266 1014 aa13.36□□□□□ -0.27
CCDC78-209ENST00000474647 FBLP22087 321 aaKnown RBP13.36□□□□□ -0.27
CCDC78-209ENST00000474647 CYLC1P35663 651 aaPredicted RBP13.36□□□□□ -0.27
CCDC78-209ENST00000474647 BDKRB1P46663 353 aa13.36□□□□□ -0.27
CCDC78-209ENST00000474647 SRSF11Q05519 484 aaKnown RBP13.36□□□□□ -0.27
CCDC78-209ENST00000474647 CDH17Q12864 832 aa13.36□□□□□ -0.27
CCDC78-209ENST00000474647 GRB7Q14451 532 aa13.36□□□□□ -0.27
CCDC78-209ENST00000474647 SEMA3AQ14563 771 aa13.36□□□□□ -0.27
CCDC78-209ENST00000474647 TMED2Q15363 201 aa13.36□□□□□ -0.27
CCDC78-209ENST00000474647 FASTKD1Q53R41 847 aaKnown RBP13.36□□□□□ -0.27
CCDC78-209ENST00000474647 VWA2Q5GFL6 755 aa13.36□□□□□ -0.27
CCDC78-209ENST00000474647 FAAH2Q6GMR7 532 aa13.36□□□□□ -0.27
CCDC78-209ENST00000474647 RPUSD3Q6P087 351 aaKnown RBP13.36□□□□□ -0.27
CCDC78-209ENST00000474647 TTC23LQ6PF05 361 aa13.36□□□□□ -0.27
CCDC78-209ENST00000474647 CNSTQ6PJW8 725 aa13.36□□□□□ -0.27
CCDC78-209ENST00000474647 GFRALQ6UXV0 394 aa13.36□□□□□ -0.27
CCDC78-209ENST00000474647 PPP1R21Q6ZMI0 780 aa13.36□□□□□ -0.27
CCDC78-209ENST00000474647 GSDMBQ8TAX9 411 aa13.36□□□□□ -0.27
CCDC78-209ENST00000474647 BRIX1Q8TDN6 353 aaKnown RBP13.36□□□□□ -0.27
CCDC78-209ENST00000474647 ALG3Q92685 438 aa13.36□□□□□ -0.27
CCDC78-209ENST00000474647 LMF1Q96S06 567 aa13.36□□□□□ -0.27
CCDC78-209ENST00000474647 MIPEPQ99797 713 aa13.36□□□□□ -0.27
CCDC78-209ENST00000474647 BAG1Q99933 345 aaPredicted RBP13.36□□□□□ -0.27
CCDC78-209ENST00000474647 TMEM121Q9BTD3 319 aa13.36□□□□□ -0.27
CCDC78-209ENST00000474647 YIPF2Q9BWQ6 316 aa13.36□□□□□ -0.27
CCDC78-209ENST00000474647 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.36□□□□□ -0.27
CCDC78-209ENST00000474647 STOX2Q9P2F5 926 aaPredicted RBP13.36□□□□□ -0.27
CCDC78-209ENST00000474647 SUCOQ9UBS9 1254 aaKnown RBP13.36□□□□□ -0.27
CCDC78-209ENST00000474647 TSR3Q9UJK0 312 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms