RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 TOR4AQ9NXH8 423 aa18.14■□□□□ 0.49
ECHDC1-214ENST00000474289 MUTYHQ9UIF7 546 aa18.14■□□□□ 0.49
ECHDC1-214ENST00000474289 E9PQ18 207 aa18.13■□□□□ 0.49
ECHDC1-214ENST00000474289 OR7A17O14581 309 aa18.13■□□□□ 0.49
ECHDC1-214ENST00000474289 GPR32O75388 356 aa18.13■□□□□ 0.49
ECHDC1-214ENST00000474289 PRKACBP22694 351 aa18.13■□□□□ 0.49
ECHDC1-214ENST00000474289 OR3A3P47888 321 aa18.13■□□□□ 0.49
ECHDC1-214ENST00000474289 CYP4F2P78329 520 aa18.13■□□□□ 0.49
ECHDC1-214ENST00000474289 TP53BP2Q13625 1128 aa18.13■□□□□ 0.49
ECHDC1-214ENST00000474289 FBXO43Q4G163 708 aa18.13■□□□□ 0.49
ECHDC1-214ENST00000474289 ZMAT1Q5H9K5 638 aa18.13■□□□□ 0.49
ECHDC1-214ENST00000474289 GPR153Q6NV75 609 aa18.13■□□□□ 0.49
ECHDC1-214ENST00000474289 LIX1Q8N485 282 aa18.13■□□□□ 0.49
ECHDC1-214ENST00000474289 DNAJC22Q8N4W6 341 aa18.13■□□□□ 0.49
ECHDC1-214ENST00000474289 ARRDC4Q8NCT1 418 aa18.13■□□□□ 0.49
ECHDC1-214ENST00000474289 FLCNQ8NFG4 579 aa18.13■□□□□ 0.49
ECHDC1-214ENST00000474289 ST13P5Q8NFI4 369 aaPredicted RBP18.13■□□□□ 0.49
ECHDC1-214ENST00000474289 OR5H6Q8NGV6 325 aa18.13■□□□□ 0.49
ECHDC1-214ENST00000474289 EEF1AKMT1Q8WVE0 214 aa18.13■□□□□ 0.49
ECHDC1-214ENST00000474289 PEX13Q92968 403 aa18.13■□□□□ 0.49
ECHDC1-214ENST00000474289 TADA1Q96BN2 335 aa18.13■□□□□ 0.49
ECHDC1-214ENST00000474289 HRASLS5Q96KN8 279 aa18.13■□□□□ 0.49
ECHDC1-214ENST00000474289 ROGDIQ9GZN7 287 aa18.13■□□□□ 0.49
ECHDC1-214ENST00000474289 MMP28Q9H239 520 aa18.13■□□□□ 0.49
ECHDC1-214ENST00000474289 CLMPQ9H6B4 373 aa18.13■□□□□ 0.49
ECHDC1-214ENST00000474289 NUFIP1Q9UHK0 495 aaKnown RBP18.13■□□□□ 0.49
ECHDC1-214ENST00000474289 CFL2Q9Y281 166 aa18.13■□□□□ 0.49
ECHDC1-214ENST00000474289 FZD9O00144 591 aa18.13■□□□□ 0.49
ECHDC1-214ENST00000474289 HSMCR30P0CW71 290 aa18.13■□□□□ 0.49
ECHDC1-214ENST00000474289 TUFMP49411 452 aaKnown RBP18.13■□□□□ 0.49
ECHDC1-214ENST00000474289 RAP1GAP2Q684P5 730 aa18.13■□□□□ 0.49
ECHDC1-214ENST00000474289 GOLGA7Q7Z5G4 137 aa18.13■□□□□ 0.49
ECHDC1-214ENST00000474289 NATD1Q8N6N6 113 aa18.13■□□□□ 0.49
ECHDC1-214ENST00000474289 GLB1L3Q8NCI6 653 aaPredicted RBP18.13■□□□□ 0.49
ECHDC1-214ENST00000474289 CLHC1Q8NHS4 586 aa18.13■□□□□ 0.49
ECHDC1-214ENST00000474289 POP5Q969H6 163 aaKnown RBP18.13■□□□□ 0.49
ECHDC1-214ENST00000474289 LINGO1Q96FE5 620 aa18.13■□□□□ 0.49
ECHDC1-214ENST00000474289 CDKN2AIPNLQ96HQ2 116 aa18.13■□□□□ 0.49
ECHDC1-214ENST00000474289 SENP8Q96LD8 212 aa18.13■□□□□ 0.49
ECHDC1-214ENST00000474289 TTPALQ9BTX7 342 aa18.13■□□□□ 0.49
ECHDC1-214ENST00000474289 TNKS2Q9H2K2 1166 aa18.13■□□□□ 0.49
ECHDC1-214ENST00000474289 ZMYM5Q9UJ78 669 aa18.13■□□□□ 0.49
ECHDC1-214ENST00000474289 DNMT3LQ9UJW3 386 aa18.13■□□□□ 0.49
ECHDC1-214ENST00000474289 PIN4Q9Y237 131 aaKnown RBP18.13■□□□□ 0.49
ECHDC1-214ENST00000474289 PCDHB5Q9Y5E4 795 aa18.13■□□□□ 0.49
ECHDC1-214ENST00000474289 HS3ST4Q9Y661 456 aa18.13■□□□□ 0.49
ECHDC1-214ENST00000474289 NUP214P35658 2090 aaPredicted RBP18.13■□□□□ 0.49
ECHDC1-214ENST00000474289 A0A0G2JLL6 359 aaPredicted RBP18.12■□□□□ 0.49
ECHDC1-214ENST00000474289 LINC00854A0A1B0GVQ3 168 aa18.12■□□□□ 0.49
ECHDC1-214ENST00000474289 CLCA1A8K7I4 914 aa18.12■□□□□ 0.49
ECHDC1-214ENST00000474289 CPNE3O75131 537 aaKnown RBP18.12■□□□□ 0.49
ECHDC1-214ENST00000474289 STSP08842 583 aa18.12■□□□□ 0.49
ECHDC1-214ENST00000474289 PKLRP30613 574 aa18.12■□□□□ 0.49
ECHDC1-214ENST00000474289 TIE1P35590 1138 aa18.12■□□□□ 0.49
ECHDC1-214ENST00000474289 NUDT6P53370 316 aa18.12■□□□□ 0.49
ECHDC1-214ENST00000474289 BAK1Q16611 211 aa18.12■□□□□ 0.49
ECHDC1-214ENST00000474289 PTPRNQ16849 979 aa18.12■□□□□ 0.49
ECHDC1-214ENST00000474289 FAHD1Q6P587 224 aa18.12■□□□□ 0.49
ECHDC1-214ENST00000474289 ZNF551Q7Z340 670 aaPredicted RBP18.12■□□□□ 0.49
ECHDC1-214ENST00000474289 PRRT2Q7Z6L0 340 aaPredicted RBP18.12■□□□□ 0.49
ECHDC1-214ENST00000474289 VTCN1Q7Z7D3 282 aa18.12■□□□□ 0.49
ECHDC1-214ENST00000474289 GALNT10Q86SR1 603 aa18.12■□□□□ 0.49
ECHDC1-214ENST00000474289 FAM109AQ8N4B1 249 aa18.12■□□□□ 0.49
ECHDC1-214ENST00000474289 TTC9Q92623 222 aa18.12■□□□□ 0.49
ECHDC1-214ENST00000474289 PSMG2Q969U7 264 aa18.12■□□□□ 0.49
ECHDC1-214ENST00000474289 CEP295NLQ96MC4 621 aa18.12■□□□□ 0.49
ECHDC1-214ENST00000474289 GON7Q9BXV9 100 aa18.12■□□□□ 0.49
ECHDC1-214ENST00000474289 MKRN2Q9H000 416 aaKnown RBP18.12■□□□□ 0.49
ECHDC1-214ENST00000474289 FKBP14Q9NWM8 211 aa18.12■□□□□ 0.49
ECHDC1-214ENST00000474289 GPR83Q9NYM4 423 aa18.12■□□□□ 0.49
ECHDC1-214ENST00000474289 NIPSNAP2O75323 286 aa18.12■□□□□ 0.49
ECHDC1-214ENST00000474289 CCNDBP1O95273 360 aa18.12■□□□□ 0.49
ECHDC1-214ENST00000474289 FABP3P05413 133 aa18.12■□□□□ 0.49
ECHDC1-214ENST00000474289 RPS5P46782 204 aaKnown RBP18.12■□□□□ 0.49
ECHDC1-214ENST00000474289 BRSK1Q8TDC3 778 aa18.12■□□□□ 0.49
ECHDC1-214ENST00000474289 MAP6Q96JE9 813 aa18.12■□□□□ 0.49
ECHDC1-214ENST00000474289 RUBCNLQ9H714 662 aa18.12■□□□□ 0.49
ECHDC1-214ENST00000474289 PLCXD1Q9NUJ7 323 aa18.12■□□□□ 0.49
ECHDC1-214ENST00000474289 THUMPD1Q9NXG2 353 aaKnown RBP18.12■□□□□ 0.49
ECHDC1-214ENST00000474289 SPASTQ9UBP0 616 aa18.12■□□□□ 0.49
ECHDC1-214ENST00000474289 KLHL20Q9Y2M5 609 aa18.12■□□□□ 0.49
ECHDC1-214ENST00000474289 PTCH2Q9Y6C5 1203 aa18.12■□□□□ 0.49
ECHDC1-214ENST00000474289 NDUFS3O75489 264 aa18.11■□□□□ 0.49
ECHDC1-214ENST00000474289 PIK3CGP48736 1102 aa18.11■□□□□ 0.49
ECHDC1-214ENST00000474289 CD83Q01151 205 aa18.11■□□□□ 0.49
ECHDC1-214ENST00000474289 HMGCS1Q01581 520 aa18.11■□□□□ 0.49
ECHDC1-214ENST00000474289 SUSD1Q6UWL2 747 aa18.11■□□□□ 0.49
ECHDC1-214ENST00000474289 SCAMP5Q8TAC9 235 aa18.11■□□□□ 0.49
ECHDC1-214ENST00000474289 TMEM40Q8WWA1 233 aa18.11■□□□□ 0.49
ECHDC1-214ENST00000474289 BHMTQ93088 406 aa18.11■□□□□ 0.49
ECHDC1-214ENST00000474289 MCCC1Q96RQ3 725 aaPredicted RBP18.11■□□□□ 0.49
ECHDC1-214ENST00000474289 COQ7Q99807 217 aa18.11■□□□□ 0.49
ECHDC1-214ENST00000474289 ZNF717Q9BY31 904 aaPredicted RBP18.11■□□□□ 0.49
ECHDC1-214ENST00000474289 SERHLQ9NQF3 203 aa18.11■□□□□ 0.49
ECHDC1-214ENST00000474289 KLK4Q9Y5K2 254 aa18.11■□□□□ 0.49
ECHDC1-214ENST00000474289 V9GYH0 126 aa18.11■□□□□ 0.49
ECHDC1-214ENST00000474289 C12orf71A8MTZ7 269 aa18.11■□□□□ 0.49
ECHDC1-214ENST00000474289 B3GALT4O96024 378 aa18.11■□□□□ 0.49
ECHDC1-214ENST00000474289 AZGP1P25311 298 aaKnown RBP18.11■□□□□ 0.49
ECHDC1-214ENST00000474289 CDKN1CP49918 316 aaPredicted RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms