RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 FRS2Q8WU20 508 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 LPPQ93052 612 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 HIST1H2AHQ96KK5 128 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 HRASLS5Q96KN8 279 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 HIST1H2AJQ99878 128 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 H2AFJQ9BTM1 129 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 SPON2Q9BUD6 331 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 SLC32A1Q9H598 525 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 RUBCNLQ9H714 662 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 TRPV5Q9NQA5 729 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 AASDHPPTQ9NRN7 309 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 CCL27Q9Y4X3 112 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 LYVE1Q9Y5Y7 322 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 A0A1B0GVM2 712 aa5.96□□□□□ -1.45
HERC4-209ENST00000473533 SH3D21A4FU49 640 aa5.96□□□□□ -1.45
HERC4-209ENST00000473533 H7C4K7 107 aa5.96□□□□□ -1.45
HERC4-209ENST00000473533 TOR1BO14657 336 aa5.96□□□□□ -1.45
HERC4-209ENST00000473533 KPNA5O15131 536 aa5.96□□□□□ -1.45
HERC4-209ENST00000473533 IDH3BO43837 385 aa5.96□□□□□ -1.45
HERC4-209ENST00000473533 PARNO95453 639 aaKnown RBP5.96□□□□□ -1.45
HERC4-209ENST00000473533 EOMESO95936 686 aa5.96□□□□□ -1.45
HERC4-209ENST00000473533 C8GP07360 202 aa5.96□□□□□ -1.45
HERC4-209ENST00000473533 SRPRAP08240 638 aaKnown RBP5.96□□□□□ -1.45
HERC4-209ENST00000473533 BCKDHAP12694 445 aa5.96□□□□□ -1.45
HERC4-209ENST00000473533 AKR1A1P14550 325 aa5.96□□□□□ -1.45
HERC4-209ENST00000473533 ACVRL1P37023 503 aa5.96□□□□□ -1.45
HERC4-209ENST00000473533 ASMTP46597 345 aa5.96□□□□□ -1.45
HERC4-209ENST00000473533 HSPA7P48741 367 aa5.96□□□□□ -1.45
HERC4-209ENST00000473533 FKBP1BP68106 108 aa5.96□□□□□ -1.45
HERC4-209ENST00000473533 ELAVL2Q12926 359 aaKnown RBP5.96□□□□□ -1.45
HERC4-209ENST00000473533 SP140Q13342 867 aa5.96□□□□□ -1.45
HERC4-209ENST00000473533 DNASE1L3Q13609 305 aa5.96□□□□□ -1.45
HERC4-209ENST00000473533 BOP1Q14137 746 aaKnown RBP5.96□□□□□ -1.45
HERC4-209ENST00000473533 MAPK11Q15759 364 aa5.96□□□□□ -1.45
HERC4-209ENST00000473533 INAVAQ3KP66 663 aa5.96□□□□□ -1.45
HERC4-209ENST00000473533 ARMCX4Q5H9R4 360 aa5.96□□□□□ -1.45
HERC4-209ENST00000473533 RSBN1Q5VWQ0 802 aaPredicted RBP5.96□□□□□ -1.45
HERC4-209ENST00000473533 ZDHHC20Q5W0Z9 365 aa5.96□□□□□ -1.45
HERC4-209ENST00000473533 PSAPL1Q6NUJ1 521 aa5.96□□□□□ -1.45
HERC4-209ENST00000473533 ERAP2Q6P179 960 aa5.96□□□□□ -1.45
HERC4-209ENST00000473533 MIB1Q86YT6 1006 aa5.96□□□□□ -1.45
HERC4-209ENST00000473533 SLC30A8Q8IWU4 369 aa5.96□□□□□ -1.45
HERC4-209ENST00000473533 CHPFQ8IZ52 775 aa5.96□□□□□ -1.45
HERC4-209ENST00000473533 STX19Q8N4C7 294 aa5.96□□□□□ -1.45
HERC4-209ENST00000473533 OR9Q1Q8NGQ5 310 aa5.96□□□□□ -1.45
HERC4-209ENST00000473533 GRPEL2Q8TAA5 225 aa5.96□□□□□ -1.45
HERC4-209ENST00000473533 NETO1Q8TDF5 533 aa5.96□□□□□ -1.45
HERC4-209ENST00000473533 SELENOMQ8WWX9 145 aa5.96□□□□□ -1.45
HERC4-209ENST00000473533 ZNF486Q96H40 463 aaPredicted RBP5.96□□□□□ -1.45
HERC4-209ENST00000473533 MYO19Q96H55 970 aa5.96□□□□□ -1.45
HERC4-209ENST00000473533 RAD9AQ99638 391 aa5.96□□□□□ -1.45
HERC4-209ENST00000473533 HTATIP2Q9BUP3 242 aa5.96□□□□□ -1.45
HERC4-209ENST00000473533 HERC2P3Q9BVR0 1158 aa5.96□□□□□ -1.45
HERC4-209ENST00000473533 C6orf62Q9GZU0 229 aaPredicted RBP5.96□□□□□ -1.45
HERC4-209ENST00000473533 NUAK2Q9H093 628 aa5.96□□□□□ -1.45
HERC4-209ENST00000473533 SPASTQ9UBP0 616 aa5.96□□□□□ -1.45
HERC4-209ENST00000473533 ZMYM5Q9UJ78 669 aa5.96□□□□□ -1.45
HERC4-209ENST00000473533 WBP11Q9Y2W2 641 aaKnown RBP5.96□□□□□ -1.45
HERC4-209ENST00000473533 SPO11Q9Y5K1 396 aa5.96□□□□□ -1.45
HERC4-209ENST00000473533 MAGED1Q9Y5V3 778 aaPredicted RBP5.96□□□□□ -1.45
HERC4-209ENST00000473533 NLRC5Q86WI3 1866 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 A0A075B6Q4 140 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 A0A1B0GTL3 188 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 SLC16A5O15375 505 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 PIRTP0C851 137 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 ZNF865P0CJ78 1059 aaPredicted RBP5.96□□□□□ -1.46
HERC4-209ENST00000473533 HSD3B1P14060 373 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 CD72P21854 359 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 HSD3B2P26439 372 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 HOXD9P28356 352 aaPredicted RBP5.96□□□□□ -1.46
HERC4-209ENST00000473533 KDELR2P33947 212 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 HMGCLP35914 325 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 RPL3P39023 403 aaKnown RBP5.96□□□□□ -1.46
HERC4-209ENST00000473533 CLK3P49761 638 aaKnown RBP5.96□□□□□ -1.46
HERC4-209ENST00000473533 GZMMP51124 257 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 DAPP51397 102 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 IST1P53990 364 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 PNLIPRP1P54315 467 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 SELENBP1Q13228 472 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 CAMK2GQ13555 558 aaPredicted RBP5.96□□□□□ -1.46
HERC4-209ENST00000473533 LAPTM5Q13571 262 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 NKG7Q16617 165 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 ARMC12Q5T9G4 340 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 LAIR2Q6ISS4 152 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 MACC1Q6ZN28 852 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 ZBTB46Q86UZ6 589 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 RGL4Q8IZJ4 473 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 FAM86B1Q8N7N1 296 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 MDGA1Q8NFP4 955 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 NPLOC4Q8TAT6 608 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 SOCS4Q8WXH5 440 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 CDK15Q96Q40 435 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 C3orf14Q9HBI5 128 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 DIABLOQ9NR28 239 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 LATS2Q9NRM7 1088 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 SLC25A37Q9NYZ2 338 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 CNOT2Q9NZN8 540 aaKnown RBP5.96□□□□□ -1.46
HERC4-209ENST00000473533 HECAQ9UBI9 543 aaPredicted RBP5.96□□□□□ -1.46
HERC4-209ENST00000473533 BTBD3Q9Y2F9 522 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 CLCA1A8K7I4 914 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms