RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 RUFY1Q96T51 708 aa11.09□□□□□ -0.63
CPNE1-222ENST00000473373 DPH2Q9BQC3 489 aaPredicted RBP11.09□□□□□ -0.63
CPNE1-222ENST00000473373 SELENOSQ9BQE4 189 aa11.09□□□□□ -0.63
CPNE1-222ENST00000473373 SLC25A18Q9H1K4 315 aa11.09□□□□□ -0.63
CPNE1-222ENST00000473373 MRPS30Q9NP92 439 aaKnown RBP11.09□□□□□ -0.63
CPNE1-222ENST00000473373 ZNF71Q9NQZ8 489 aaPredicted RBP11.09□□□□□ -0.63
CPNE1-222ENST00000473373 ACSS2Q9NR19 701 aa11.09□□□□□ -0.63
CPNE1-222ENST00000473373 PCMTD2Q9NV79 361 aa11.09□□□□□ -0.63
CPNE1-222ENST00000473373 GEMIN8Q9NWZ8 242 aaKnown RBP11.09□□□□□ -0.63
CPNE1-222ENST00000473373 EURLQ9NYK6 297 aa11.09□□□□□ -0.63
CPNE1-222ENST00000473373 TAS2R13Q9NYV9 303 aa11.09□□□□□ -0.63
CPNE1-222ENST00000473373 ZFATQ9P243 1243 aa11.09□□□□□ -0.63
CPNE1-222ENST00000473373 GALPQ9UBC7 116 aa11.09□□□□□ -0.63
CPNE1-222ENST00000473373 DHCR7Q9UBM7 475 aaKnown RBP11.09□□□□□ -0.63
CPNE1-222ENST00000473373 PCDHGA6Q9Y5G7 932 aa11.09□□□□□ -0.63
CPNE1-222ENST00000473373 PIEZO2Q9H5I5 2752 aa11.08□□□□□ -0.64
CPNE1-222ENST00000473373 SCN3AQ9NY46 2000 aa11.08□□□□□ -0.64
CPNE1-222ENST00000473373 A0A0J9YVX5 310 aa11.08□□□□□ -0.64
CPNE1-222ENST00000473373 ARHGEF33A8MVX0 844 aa11.08□□□□□ -0.64
CPNE1-222ENST00000473373 RFPL1O75677 317 aa11.08□□□□□ -0.64
CPNE1-222ENST00000473373 HIST1H2AGP0C0S8 130 aaPredicted RBP11.08□□□□□ -0.64
CPNE1-222ENST00000473373 MSL3P1P0C860 447 aa11.08□□□□□ -0.64
CPNE1-222ENST00000473373 TPBGLP0DKB5 382 aa11.08□□□□□ -0.64
CPNE1-222ENST00000473373 MPC1LP0DKB6 136 aa11.08□□□□□ -0.64
CPNE1-222ENST00000473373 CBSLP0DN79 551 aa11.08□□□□□ -0.64
CPNE1-222ENST00000473373 PIM1P11309 404 aaPredicted RBP11.08□□□□□ -0.64
CPNE1-222ENST00000473373 HIST1H2ADP20671 130 aa11.08□□□□□ -0.64
CPNE1-222ENST00000473373 OTX2P32243 289 aa11.08□□□□□ -0.64
CPNE1-222ENST00000473373 CBSP35520 551 aa11.08□□□□□ -0.64
CPNE1-222ENST00000473373 HSD17B2P37059 387 aa11.08□□□□□ -0.64
CPNE1-222ENST00000473373 FOLR3P41439 243 aa11.08□□□□□ -0.64
CPNE1-222ENST00000473373 CSRP3P50461 194 aa11.08□□□□□ -0.64
CPNE1-222ENST00000473373 CLCN7P51798 805 aa11.08□□□□□ -0.64
CPNE1-222ENST00000473373 PNLIPRP1P54315 467 aa11.08□□□□□ -0.64
CPNE1-222ENST00000473373 ARSFP54793 590 aa11.08□□□□□ -0.64
CPNE1-222ENST00000473373 VSX2P58304 361 aaPredicted RBP11.08□□□□□ -0.64
CPNE1-222ENST00000473373 DCDP81605 110 aaKnown RBP11.08□□□□□ -0.64
CPNE1-222ENST00000473373 MRPS25P82663 173 aaKnown RBP11.08□□□□□ -0.64
CPNE1-222ENST00000473373 ZIC1Q15915 447 aa11.08□□□□□ -0.64
CPNE1-222ENST00000473373 MSS51Q4VC12 460 aa11.08□□□□□ -0.64
CPNE1-222ENST00000473373 CRTC2Q53ET0 693 aaPredicted RBP11.08□□□□□ -0.64
CPNE1-222ENST00000473373 TCTE1Q5JU00 501 aa11.08□□□□□ -0.64
CPNE1-222ENST00000473373 TTLL10Q6ZVT0 673 aa11.08□□□□□ -0.64
CPNE1-222ENST00000473373 NEK10Q6ZWH5 1172 aa11.08□□□□□ -0.64
CPNE1-222ENST00000473373 RAB43Q86YS6 212 aa11.08□□□□□ -0.64
CPNE1-222ENST00000473373 MCATQ8IVS2 390 aaKnown RBP11.08□□□□□ -0.64
CPNE1-222ENST00000473373 SLC38A9Q8NBW4 561 aa11.08□□□□□ -0.64
CPNE1-222ENST00000473373 C2CD4AQ8NCU7 369 aaPredicted RBP11.08□□□□□ -0.64
CPNE1-222ENST00000473373 PPFIBP2Q8ND30 876 aa11.08□□□□□ -0.64
CPNE1-222ENST00000473373 MCOLN3Q8TDD5 553 aa11.08□□□□□ -0.64
CPNE1-222ENST00000473373 THAP4Q8WY91 577 aa11.08□□□□□ -0.64
CPNE1-222ENST00000473373 SMPDL3AQ92484 453 aa11.08□□□□□ -0.64
CPNE1-222ENST00000473373 LRRC39Q96DD0 335 aa11.08□□□□□ -0.64
CPNE1-222ENST00000473373 HIST1H2AHQ96KK5 128 aa11.08□□□□□ -0.64
CPNE1-222ENST00000473373 LRFN5Q96NI6 719 aa11.08□□□□□ -0.64
CPNE1-222ENST00000473373 HIST1H2AJQ99878 128 aa11.08□□□□□ -0.64
CPNE1-222ENST00000473373 AARSD1Q9BTE6 412 aaKnown RBP11.08□□□□□ -0.64
CPNE1-222ENST00000473373 H2AFJQ9BTM1 129 aa11.08□□□□□ -0.64
CPNE1-222ENST00000473373 NLNQ9BYT8 704 aa11.08□□□□□ -0.64
CPNE1-222ENST00000473373 AKIRIN1Q9H9L7 192 aaPredicted RBP11.08□□□□□ -0.64
CPNE1-222ENST00000473373 TXNDC16Q9P2K2 825 aa11.08□□□□□ -0.64
CPNE1-222ENST00000473373 TAC3Q9UHF0 121 aa11.08□□□□□ -0.64
CPNE1-222ENST00000473373 SNX24Q9Y343 169 aa11.08□□□□□ -0.64
CPNE1-222ENST00000473373 DHRS7Q9Y394 339 aa11.08□□□□□ -0.64
CPNE1-222ENST00000473373 UTP11Q9Y3A2 253 aaKnown RBP11.08□□□□□ -0.64
CPNE1-222ENST00000473373 SCN2AQ99250 2005 aa11.08□□□□□ -0.64
CPNE1-222ENST00000473373 MED13Q9UHV7 2174 aa11.07□□□□□ -0.64
CPNE1-222ENST00000473373 ARGFXA6NJG6 315 aa11.07□□□□□ -0.64
CPNE1-222ENST00000473373 PSIP1O75475 530 aaKnown RBP11.07□□□□□ -0.64
CPNE1-222ENST00000473373 SEC31AO94979 1220 aaKnown RBP11.07□□□□□ -0.64
CPNE1-222ENST00000473373 MATN4O95460 622 aa11.07□□□□□ -0.64
CPNE1-222ENST00000473373 CD63P08962 238 aa11.07□□□□□ -0.64
CPNE1-222ENST00000473373 RAB40ALP0C0E4 278 aa11.07□□□□□ -0.64
CPNE1-222ENST00000473373 SKIV2L2P42285 1042 aaKnown RBP11.07□□□□□ -0.64
CPNE1-222ENST00000473373 SLC12A2P55011 1212 aa11.07□□□□□ -0.64
CPNE1-222ENST00000473373 CKAP4Q07065 602 aaKnown RBP11.07□□□□□ -0.64
CPNE1-222ENST00000473373 FASTKQ14296 549 aaKnown RBP11.07□□□□□ -0.64
CPNE1-222ENST00000473373 GRM7Q14831 915 aa11.07□□□□□ -0.64
CPNE1-222ENST00000473373 NCF4Q15080 339 aa11.07□□□□□ -0.64
CPNE1-222ENST00000473373 UGT8Q16880 541 aa11.07□□□□□ -0.64
CPNE1-222ENST00000473373 LACTB2Q53H82 288 aaPredicted RBP11.07□□□□□ -0.64
CPNE1-222ENST00000473373 HIBCHQ6NVY1 386 aaPredicted RBP11.07□□□□□ -0.64
CPNE1-222ENST00000473373 KIAA0408Q6ZU52 694 aa11.07□□□□□ -0.64
CPNE1-222ENST00000473373 PIWIL4Q7Z3Z4 852 aaKnown RBP11.07□□□□□ -0.64
CPNE1-222ENST00000473373 ZBED8Q8IZ13 594 aa11.07□□□□□ -0.64
CPNE1-222ENST00000473373 AGGF1Q8N302 714 aaeCLIP11.07□□□□□ -0.64
CPNE1-222ENST00000473373 DNAJC22Q8N4W6 341 aa11.07□□□□□ -0.64
CPNE1-222ENST00000473373 FBXO36Q8NEA4 188 aa11.07□□□□□ -0.64
CPNE1-222ENST00000473373 OR2L3Q8NG85 312 aa11.07□□□□□ -0.64
CPNE1-222ENST00000473373 PROKR1Q8TCW9 393 aa11.07□□□□□ -0.64
CPNE1-222ENST00000473373 CD200R1Q8TD46 325 aa11.07□□□□□ -0.64
CPNE1-222ENST00000473373 ZNF592Q92610 1267 aa11.07□□□□□ -0.64
CPNE1-222ENST00000473373 RERGQ96A58 199 aaPredicted RBP11.07□□□□□ -0.64
CPNE1-222ENST00000473373 ZUFSPQ96AP4 578 aa11.07□□□□□ -0.64
CPNE1-222ENST00000473373 LINGO1Q96FE5 620 aa11.07□□□□□ -0.64
CPNE1-222ENST00000473373 PWWP2AQ96N64 755 aa11.07□□□□□ -0.64
CPNE1-222ENST00000473373 PKP4Q99569 1192 aa11.07□□□□□ -0.64
CPNE1-222ENST00000473373 SLC30A3Q99726 388 aa11.07□□□□□ -0.64
CPNE1-222ENST00000473373 DPH7Q9BTV6 452 aa11.07□□□□□ -0.64
CPNE1-222ENST00000473373 YIPF2Q9BWQ6 316 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms