RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 FIGNQ5HY92 759 aa13.28□□□□□ -0.28
SMURF1-203ENST00000472627 NEK10Q6ZWH5 1172 aa13.28□□□□□ -0.28
SMURF1-203ENST00000472627 TAOK1Q7L7X3 1001 aa13.28□□□□□ -0.28
SMURF1-203ENST00000472627 SERPINA9Q86WD7 417 aa13.28□□□□□ -0.28
SMURF1-203ENST00000472627 CPNE8Q86YQ8 564 aa13.28□□□□□ -0.28
SMURF1-203ENST00000472627 ZNF567Q8N184 647 aa13.28□□□□□ -0.28
SMURF1-203ENST00000472627 GHDCQ8N2G8 530 aa13.28□□□□□ -0.28
SMURF1-203ENST00000472627 RAB42Q8N4Z0 105 aa13.28□□□□□ -0.28
SMURF1-203ENST00000472627 HORMAD2Q8N7B1 307 aa13.28□□□□□ -0.28
SMURF1-203ENST00000472627 DNAAF3Q8N9W5 541 aa13.28□□□□□ -0.28
SMURF1-203ENST00000472627 TMEM178AQ8NBL3 297 aa13.28□□□□□ -0.28
SMURF1-203ENST00000472627 AGAP11Q8TF27 550 aa13.28□□□□□ -0.28
SMURF1-203ENST00000472627 P3H4Q92791 437 aa13.28□□□□□ -0.28
SMURF1-203ENST00000472627 ZUFSPQ96AP4 578 aa13.28□□□□□ -0.28
SMURF1-203ENST00000472627 TUBB6Q9BUF5 446 aa13.28□□□□□ -0.28
SMURF1-203ENST00000472627 RAB11FIP5Q9BXF6 653 aa13.28□□□□□ -0.28
SMURF1-203ENST00000472627 DDX56Q9NY93 547 aaKnown RBP13.28□□□□□ -0.28
SMURF1-203ENST00000472627 TNFRSF10DQ9UBN6 386 aa13.28□□□□□ -0.28
SMURF1-203ENST00000472627 FEZ2Q9UHY8 353 aaPredicted RBP13.28□□□□□ -0.28
SMURF1-203ENST00000472627 PLAGL1Q9UM63 463 aa13.28□□□□□ -0.28
SMURF1-203ENST00000472627 KLHL20Q9Y2M5 609 aa13.28□□□□□ -0.28
SMURF1-203ENST00000472627 AAR2Q9Y312 384 aaKnown RBP13.28□□□□□ -0.28
SMURF1-203ENST00000472627 IGLV3-12A0A075B6K2 115 aa13.27□□□□□ -0.29
SMURF1-203ENST00000472627 TARM1B6A8C7 271 aa13.27□□□□□ -0.29
SMURF1-203ENST00000472627 NPIPA5E9PKD4 350 aa13.27□□□□□ -0.29
SMURF1-203ENST00000472627 ZWINTO95229 277 aa13.27□□□□□ -0.29
SMURF1-203ENST00000472627 AGTP01019 485 aa13.27□□□□□ -0.29
SMURF1-203ENST00000472627 CD9P21926 228 aa13.27□□□□□ -0.29
SMURF1-203ENST00000472627 ACADLP28330 430 aa13.27□□□□□ -0.29
SMURF1-203ENST00000472627 PEBP1P30086 187 aaKnown RBP13.27□□□□□ -0.29
SMURF1-203ENST00000472627 DNAJA1P31689 397 aaKnown RBP13.27□□□□□ -0.29
SMURF1-203ENST00000472627 GRIA3P42263 894 aa13.27□□□□□ -0.29
SMURF1-203ENST00000472627 ARHGAP25P42331 645 aa13.27□□□□□ -0.29
SMURF1-203ENST00000472627 VSX2P58304 361 aaPredicted RBP13.27□□□□□ -0.29
SMURF1-203ENST00000472627 SRSF11Q05519 484 aaKnown RBP13.27□□□□□ -0.29
SMURF1-203ENST00000472627 DSG2Q14126 1118 aa13.27□□□□□ -0.29
SMURF1-203ENST00000472627 MESDQ14696 234 aa13.27□□□□□ -0.29
SMURF1-203ENST00000472627 NAA25Q14CX7 972 aa13.27□□□□□ -0.29
SMURF1-203ENST00000472627 PCOLCEQ15113 449 aa13.27□□□□□ -0.29
SMURF1-203ENST00000472627 WASHC2DQ5SRD0 308 aa13.27□□□□□ -0.29
SMURF1-203ENST00000472627 FIGLAQ6QHK4 219 aa13.27□□□□□ -0.29
SMURF1-203ENST00000472627 ARHGEF18Q6ZSZ5 1173 aa13.27□□□□□ -0.29
SMURF1-203ENST00000472627 CLDN19Q8N6F1 224 aa13.27□□□□□ -0.29
SMURF1-203ENST00000472627 OR13C4Q8NGS5 318 aa13.27□□□□□ -0.29
SMURF1-203ENST00000472627 ASB5Q8WWX0 329 aa13.27□□□□□ -0.29
SMURF1-203ENST00000472627 ZNF354BQ96LW1 612 aa13.27□□□□□ -0.29
SMURF1-203ENST00000472627 ZNF285Q96NJ3 590 aa13.27□□□□□ -0.29
SMURF1-203ENST00000472627 PPP1R2P1Q96PQ5 205 aa13.27□□□□□ -0.29
SMURF1-203ENST00000472627 SMARCAL1Q9NZC9 954 aa13.27□□□□□ -0.29
SMURF1-203ENST00000472627 TRPC4Q9UBN4 977 aa13.27□□□□□ -0.29
SMURF1-203ENST00000472627 KCNN3Q9UGI6 736 aa13.27□□□□□ -0.29
SMURF1-203ENST00000472627 SLC39A10Q9ULF5 831 aa13.27□□□□□ -0.29
SMURF1-203ENST00000472627 NPIPA1Q9UND3 350 aa13.27□□□□□ -0.29
SMURF1-203ENST00000472627 DNHD1Q96M86 4753 aa13.27□□□□□ -0.29
SMURF1-203ENST00000472627 C3orf70A6NLC5 250 aaPredicted RBP13.26□□□□□ -0.29
SMURF1-203ENST00000472627 SUN1O94901 812 aa13.26□□□□□ -0.29
SMURF1-203ENST00000472627 ANXA5P08758 320 aa13.26□□□□□ -0.29
SMURF1-203ENST00000472627 OR56A5P0C7T3 313 aa13.26□□□□□ -0.29
SMURF1-203ENST00000472627 ITGAMP11215 1152 aa13.26□□□□□ -0.29
SMURF1-203ENST00000472627 FOSL1P15407 271 aa13.26□□□□□ -0.29
SMURF1-203ENST00000472627 ZNF140P52738 457 aaPredicted RBP13.26□□□□□ -0.29
SMURF1-203ENST00000472627 MYBPHQ13203 477 aa13.26□□□□□ -0.29
SMURF1-203ENST00000472627 BRD3Q15059 726 aa13.26□□□□□ -0.29
SMURF1-203ENST00000472627 LRRC38Q5VT99 294 aa13.26□□□□□ -0.29
SMURF1-203ENST00000472627 TTC23LQ6PF05 361 aa13.26□□□□□ -0.29
SMURF1-203ENST00000472627 METTL21AQ8WXB1 218 aa13.26□□□□□ -0.29
SMURF1-203ENST00000472627 RNF25Q96BH1 459 aaPredicted RBP13.26□□□□□ -0.29
SMURF1-203ENST00000472627 MVB12AQ96EY5 273 aa13.26□□□□□ -0.29
SMURF1-203ENST00000472627 CABS1Q96KC9 395 aa13.26□□□□□ -0.29
SMURF1-203ENST00000472627 ALS2CR12Q96Q35 445 aa13.26□□□□□ -0.29
SMURF1-203ENST00000472627 MESP1Q9BRJ9 268 aa13.26□□□□□ -0.29
SMURF1-203ENST00000472627 UTP23Q9BRU9 249 aaKnown RBP13.26□□□□□ -0.29
SMURF1-203ENST00000472627 TSSK1BQ9BXA7 367 aa13.26□□□□□ -0.29
SMURF1-203ENST00000472627 ZNF700Q9H0M5 742 aa13.26□□□□□ -0.29
SMURF1-203ENST00000472627 GBA3Q9H227 469 aa13.26□□□□□ -0.29
SMURF1-203ENST00000472627 CXXC4Q9H2H0 198 aa13.26□□□□□ -0.29
SMURF1-203ENST00000472627 ZC3H7BQ9UGR2 993 aaKnown RBP13.26□□□□□ -0.29
SMURF1-203ENST00000472627 MKL2Q9ULH7 1088 aa13.26□□□□□ -0.29
SMURF1-203ENST00000472627 TRBV5-4A0A0C4DH59 114 aa13.25□□□□□ -0.29
SMURF1-203ENST00000472627 A8MUI8 341 aa13.25□□□□□ -0.29
SMURF1-203ENST00000472627 HACD1B0YJ81 288 aa13.25□□□□□ -0.29
SMURF1-203ENST00000472627 ASNA1O43681 348 aa13.25□□□□□ -0.29
SMURF1-203ENST00000472627 CST8O60676 142 aa13.25□□□□□ -0.29
SMURF1-203ENST00000472627 EIF2S1P05198 315 aaKnown RBP13.25□□□□□ -0.29
SMURF1-203ENST00000472627 IST1P53990 364 aa13.25□□□□□ -0.29
SMURF1-203ENST00000472627 OLIG2Q13516 323 aa13.25□□□□□ -0.29
SMURF1-203ENST00000472627 ITIH4Q14624 930 aa13.25□□□□□ -0.29
SMURF1-203ENST00000472627 TAZQ16635 292 aa13.25□□□□□ -0.29
SMURF1-203ENST00000472627 TMEM211Q6ICI0 200 aa13.25□□□□□ -0.29
SMURF1-203ENST00000472627 RANBP10Q6VN20 620 aa13.25□□□□□ -0.29
SMURF1-203ENST00000472627 RBM43Q6ZSC3 357 aaKnown RBP13.25□□□□□ -0.29
SMURF1-203ENST00000472627 TAX1BP1Q86VP1 789 aa13.25□□□□□ -0.29
SMURF1-203ENST00000472627 DCUN1D3Q8IWE4 304 aa13.25□□□□□ -0.29
SMURF1-203ENST00000472627 IQCDQ96DY2 449 aa13.25□□□□□ -0.29
SMURF1-203ENST00000472627 TTC1Q99614 292 aa13.25□□□□□ -0.29
SMURF1-203ENST00000472627 TSPAN10Q9H1Z9 355 aaPredicted RBP13.25□□□□□ -0.29
SMURF1-203ENST00000472627 HSD3B7Q9H2F3 369 aa13.25□□□□□ -0.29
SMURF1-203ENST00000472627 MKKSQ9NPJ1 570 aaPredicted RBP13.25□□□□□ -0.29
SMURF1-203ENST00000472627 KLHL1Q9NR64 748 aa13.25□□□□□ -0.29
SMURF1-203ENST00000472627 C19orf25Q9UFG5 118 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms