RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 BRSK1Q8TDC3 778 aa3.43□□□□□ -1.86
XRN1-209ENST00000472625 SSC4DQ8WTU2 575 aa3.43□□□□□ -1.86
XRN1-209ENST00000472625 JPH3Q8WXH2 748 aaPredicted RBP3.43□□□□□ -1.86
XRN1-209ENST00000472625 NCSTNQ92542 709 aa3.43□□□□□ -1.86
XRN1-209ENST00000472625 VOPP1Q96AW1 172 aa3.43□□□□□ -1.86
XRN1-209ENST00000472625 MIEF2Q96C03 454 aa3.43□□□□□ -1.86
XRN1-209ENST00000472625 ZNF653Q96CK0 615 aa3.43□□□□□ -1.86
XRN1-209ENST00000472625 LRRC45Q96CN5 670 aa3.43□□□□□ -1.86
XRN1-209ENST00000472625 CXorf40BQ96DE9 158 aa3.43□□□□□ -1.86
XRN1-209ENST00000472625 MOCOSQ96EN8 888 aa3.43□□□□□ -1.86
XRN1-209ENST00000472625 COX14Q96I36 57 aa3.43□□□□□ -1.86
XRN1-209ENST00000472625 VPS50Q96JG6 964 aa3.43□□□□□ -1.86
XRN1-209ENST00000472625 ZNF514Q96K75 400 aaPredicted RBP3.43□□□□□ -1.86
XRN1-209ENST00000472625 C9orf72Q96LT7 481 aa3.43□□□□□ -1.86
XRN1-209ENST00000472625 TTC25Q96NG3 672 aa3.43□□□□□ -1.86
XRN1-209ENST00000472625 IP6K3Q96PC2 410 aa3.43□□□□□ -1.86
XRN1-209ENST00000472625 ERGIC2Q96RQ1 377 aa3.43□□□□□ -1.86
XRN1-209ENST00000472625 FERMT1Q9BQL6 677 aa3.43□□□□□ -1.86
XRN1-209ENST00000472625 ZNF670Q9BS34 389 aa3.43□□□□□ -1.86
XRN1-209ENST00000472625 SNRNP25Q9BV90 132 aaKnown RBP3.43□□□□□ -1.86
XRN1-209ENST00000472625 TDRD1Q9BXT4 1180 aaKnown RBP3.43□□□□□ -1.86
XRN1-209ENST00000472625 SLC39A8Q9C0K1 460 aa3.43□□□□□ -1.86
XRN1-209ENST00000472625 TWSG1Q9GZX9 223 aa3.43□□□□□ -1.86
XRN1-209ENST00000472625 RAB33BQ9H082 229 aa3.43□□□□□ -1.86
XRN1-209ENST00000472625 QRSL1Q9H0R6 528 aaKnown RBP3.43□□□□□ -1.86
XRN1-209ENST00000472625 OSGEPL1Q9H4B0 414 aa3.43□□□□□ -1.86
XRN1-209ENST00000472625 FAM83DQ9H4H8 585 aa3.43□□□□□ -1.86
XRN1-209ENST00000472625 SUDS3Q9H7L9 328 aaPredicted RBP3.43□□□□□ -1.86
XRN1-209ENST00000472625 NOD2Q9HC29 1040 aa3.43□□□□□ -1.86
XRN1-209ENST00000472625 SYTL2Q9HCH5 934 aa3.43□□□□□ -1.86
XRN1-209ENST00000472625 NLRC4Q9NPP4 1024 aa3.43□□□□□ -1.86
XRN1-209ENST00000472625 WASH6PQ9NQA3 447 aa3.43□□□□□ -1.86
XRN1-209ENST00000472625 DMRT3Q9NQL9 472 aa3.43□□□□□ -1.86
XRN1-209ENST00000472625 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.43□□□□□ -1.86
XRN1-209ENST00000472625 SPATS2LQ9NUQ6 558 aaKnown RBP3.43□□□□□ -1.86
XRN1-209ENST00000472625 ANO10Q9NW15 660 aa3.43□□□□□ -1.86
XRN1-209ENST00000472625 SIDT1Q9NXL6 827 aaKnown RBP3.43□□□□□ -1.86
XRN1-209ENST00000472625 TAB2Q9NYJ8 693 aa3.43□□□□□ -1.86
XRN1-209ENST00000472625 CPNE7Q9UBL6 633 aa3.43□□□□□ -1.86
XRN1-209ENST00000472625 EPHA6Q9UF33 1036 aa3.43□□□□□ -1.86
XRN1-209ENST00000472625 IP6K2Q9UHH9 426 aa3.43□□□□□ -1.86
XRN1-209ENST00000472625 ZNHIT2Q9UHR6 403 aa3.43□□□□□ -1.86
XRN1-209ENST00000472625 LNPEPQ9UIQ6 1025 aa3.43□□□□□ -1.86
XRN1-209ENST00000472625 RARRES3Q9UL19 164 aa3.43□□□□□ -1.86
XRN1-209ENST00000472625 PADI1Q9ULC6 663 aa3.43□□□□□ -1.86
XRN1-209ENST00000472625 TTLL3Q9Y4R7 772 aa3.43□□□□□ -1.86
XRN1-209ENST00000472625 BZW2Q9Y6E2 419 aaKnown RBP3.43□□□□□ -1.86
XRN1-209ENST00000472625 FLNCQ14315 2725 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 MYLKQ15746 1914 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 UNC79Q9P2D8 2635 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 COL27A1Q8IZC6 1860 aaPredicted RBP3.42□□□□□ -1.86
XRN1-209ENST00000472625 TCRBV5S1A1TA0A578 114 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 PIPSLA2A3N6 862 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 TMEM191CA6NGB0 347 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 TLCD2A6NGC4 264 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 AHRRA9YTQ3 701 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 C9J4A7 227 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 PYCARD-AS1I3L0S3 204 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 MYO1FO00160 1098 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 KMOO15229 486 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 PPM1DO15297 605 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 NKX2-8O15522 239 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 ITGA10O75578 1167 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 KIAA0754O94854 1291 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 MBD3O95983 291 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 SOD1P00441 154 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 C9P02748 559 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 TPM3P06753 285 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 KLK3P07288 261 aaPredicted RBP3.42□□□□□ -1.86
XRN1-209ENST00000472625 HBQ1P09105 142 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 ACP5P13686 325 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 ZFXP17010 805 aaPredicted RBP3.42□□□□□ -1.86
XRN1-209ENST00000472625 CHRNB2P17787 502 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 GM2AP17900 193 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 XRCC1P18887 633 aaPredicted RBP3.42□□□□□ -1.86
XRN1-209ENST00000472625 IDSP22304 550 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 CCNCP24863 283 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 NDUFS1P28331 727 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 OAS2P29728 719 aaKnown RBP3.42□□□□□ -1.86
XRN1-209ENST00000472625 MIPP30301 263 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 RGRP47804 291 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 LEPRP48357 1165 aaKnown RBP3.42□□□□□ -1.86
XRN1-209ENST00000472625 SPINT3P49223 89 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 UBE2IP63279 158 aaKnown RBP3.42□□□□□ -1.86
XRN1-209ENST00000472625 TUBB4BP68371 445 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 HSD11B2P80365 405 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 GALNT2Q10471 571 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 TRAF2Q12933 501 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 PRKAA1Q13131 559 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 SRSF6Q13247 344 aaKnown RBP3.42□□□□□ -1.86
XRN1-209ENST00000472625 NFATC2Q13469 925 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 TUBB3Q13509 450 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 SEMA5AQ13591 1074 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 DNASE1L3Q13609 305 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 ITGA9Q13797 1035 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 TUBB2AQ13885 445 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 PDK2Q15119 407 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 ASIC2Q16515 512 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 TDRD12Q587J7 1177 aaKnown RBP3.42□□□□□ -1.86
XRN1-209ENST00000472625 HSP90AA4PQ58FG1 418 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms