RNA–Protein interactions for RNA: ENST00000472524.1

CCDC88B-205, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 2

Gene CCDC88B, Length 779 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-205ENST00000472524 SELENOSQ9BQE4 189 aa15.08■□□□□ 0
CCDC88B-205ENST00000472524 LRRC4CQ9HCJ2 640 aa15.08■□□□□ 0
CCDC88B-205ENST00000472524 INTS10Q9NVR2 710 aaKnown RBP15.08■□□□□ 0
CCDC88B-205ENST00000472524 TRMT1Q9NXH9 659 aaKnown RBP15.08■□□□□ 0
CCDC88B-205ENST00000472524 SPATA7Q9P0W8 599 aa15.08■□□□□ 0
CCDC88B-205ENST00000472524 VPS4AQ9UN37 437 aa15.08■□□□□ 0
CCDC88B-205ENST00000472524 G3BP2Q9UN86 482 aaKnown RBP15.08■□□□□ 0
CCDC88B-205ENST00000472524 VPS9D1Q9Y2B5 631 aa15.08■□□□□ 0
CCDC88B-205ENST00000472524 NEU2Q9Y3R4 380 aa15.08■□□□□ 0
CCDC88B-205ENST00000472524 MAGEB16A2A368 324 aa15.07■□□□□ 0
CCDC88B-205ENST00000472524 ARHGEF33A8MVX0 844 aa15.07■□□□□ 0
CCDC88B-205ENST00000472524 ZSCAN12O43309 604 aa15.07■□□□□ 0
CCDC88B-205ENST00000472524 KIF5CO60282 957 aa15.07■□□□□ 0
CCDC88B-205ENST00000472524 CNOT3O75175 753 aaKnown RBP15.07■□□□□ 0
CCDC88B-205ENST00000472524 FKBP9O95302 570 aa15.07■□□□□ 0
CCDC88B-205ENST00000472524 MATN4O95460 622 aa15.07■□□□□ 0
CCDC88B-205ENST00000472524 FNTAP49354 379 aa15.07■□□□□ 0
CCDC88B-205ENST00000472524 RRADP55042 308 aa15.07■□□□□ 0
CCDC88B-205ENST00000472524 CTBP1Q13363 440 aa15.07■□□□□ 0
CCDC88B-205ENST00000472524 TSTA3Q13630 321 aaPredicted RBP15.07■□□□□ 0
CCDC88B-205ENST00000472524 RAPSNQ13702 412 aa15.07■□□□□ 0
CCDC88B-205ENST00000472524 SSPNQ14714 243 aa15.07■□□□□ 0
CCDC88B-205ENST00000472524 PPP1R7Q15435 360 aa15.07■□□□□ 0
CCDC88B-205ENST00000472524 C4orf17Q53FE4 359 aa15.07■□□□□ 0
CCDC88B-205ENST00000472524 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.07■□□□□ 0
CCDC88B-205ENST00000472524 MED25Q71SY5 747 aa15.07■□□□□ 0
CCDC88B-205ENST00000472524 MRGPREQ86SM8 312 aa15.07■□□□□ 0
CCDC88B-205ENST00000472524 SPNS2Q8IVW8 549 aa15.07■□□□□ 0
CCDC88B-205ENST00000472524 TMEM151BQ8IW70 566 aa15.07■□□□□ 0
CCDC88B-205ENST00000472524 AGGF1Q8N302 714 aaeCLIP15.07■□□□□ 0
CCDC88B-205ENST00000472524 EFCAB3Q8N7B9 438 aa15.07■□□□□ 0
CCDC88B-205ENST00000472524 NAT8LQ8N9F0 302 aa15.07■□□□□ 0
CCDC88B-205ENST00000472524 TMEM102Q8N9M5 508 aaPredicted RBP15.07■□□□□ 0
CCDC88B-205ENST00000472524 TTC29Q8NA56 475 aaPredicted RBP15.07■□□□□ 0
CCDC88B-205ENST00000472524 OR2L3Q8NG85 312 aa15.07■□□□□ 0
CCDC88B-205ENST00000472524 ACTRT1Q8TDG2 376 aa15.07■□□□□ 0
CCDC88B-205ENST00000472524 SLC30A3Q99726 388 aa15.07■□□□□ 0
CCDC88B-205ENST00000472524 ACAT2Q9BWD1 397 aa15.07■□□□□ 0
CCDC88B-205ENST00000472524 CCDC68Q9H2F9 335 aa15.07■□□□□ 0
CCDC88B-205ENST00000472524 MLXIPLQ9NP71 852 aa15.07■□□□□ 0
CCDC88B-205ENST00000472524 C20orf96Q9NUD7 363 aaPredicted RBP15.07■□□□□ 0
CCDC88B-205ENST00000472524 CNTRLQ7Z7A1 2325 aa15.07■□□□□ 0
CCDC88B-205ENST00000472524 TEX15Q9BXT5 2789 aa15.06■□□□□ 0
CCDC88B-205ENST00000472524 ZCWPW2A0A1B0GU75 182 aa15.06■□□□□ 0
CCDC88B-205ENST00000472524 A0A1B0GX78 115 aa15.06■□□□□ 0
CCDC88B-205ENST00000472524 A0A1W2PPV9 198 aa15.06■□□□□ 0
CCDC88B-205ENST00000472524 NRP2O60462 931 aa15.06■□□□□ 0
CCDC88B-205ENST00000472524 CTSVO60911 334 aa15.06■□□□□ 0
CCDC88B-205ENST00000472524 CEACAM4O75871 244 aa15.06■□□□□ 0
CCDC88B-205ENST00000472524 SLC1A2P43004 574 aa15.06■□□□□ 0
CCDC88B-205ENST00000472524 MAGEA3P43357 314 aa15.06■□□□□ 0
CCDC88B-205ENST00000472524 ARSFP54793 590 aa15.06■□□□□ 0
CCDC88B-205ENST00000472524 VSX2P58304 361 aaPredicted RBP15.06■□□□□ 0
CCDC88B-205ENST00000472524 CUL1Q13616 776 aa15.06■□□□□ 0
CCDC88B-205ENST00000472524 ESPL1Q14674 2120 aa15.06■□□□□ 0
CCDC88B-205ENST00000472524 LONRF1Q17RB8 773 aa15.06■□□□□ 0
CCDC88B-205ENST00000472524 TTLL9Q3SXZ7 439 aa15.06■□□□□ 0
CCDC88B-205ENST00000472524 TCTE1Q5JU00 501 aa15.06■□□□□ 0
CCDC88B-205ENST00000472524 PPIL6Q8IXY8 311 aa15.06■□□□□ 0
CCDC88B-205ENST00000472524 METTL27Q8N6F8 245 aaPredicted RBP15.06■□□□□ 0
CCDC88B-205ENST00000472524 GALNT11Q8NCW6 608 aa15.06■□□□□ 0
CCDC88B-205ENST00000472524 OR9A1PQ8NGU1 263 aa15.06■□□□□ 0
CCDC88B-205ENST00000472524 OR2Y1Q8NGV0 311 aa15.06■□□□□ 0
CCDC88B-205ENST00000472524 HMGCLL1Q8TB92 370 aa15.06■□□□□ 0
CCDC88B-205ENST00000472524 ZUFSPQ96AP4 578 aa15.06■□□□□ 0
CCDC88B-205ENST00000472524 NUDT9Q9BW91 350 aa15.06■□□□□ 0
CCDC88B-205ENST00000472524 KCNF1Q9H3M0 494 aa15.06■□□□□ 0
CCDC88B-205ENST00000472524 SLC22A11Q9NSA0 550 aa15.06■□□□□ 0
CCDC88B-205ENST00000472524 CUTCQ9NTM9 273 aa15.06■□□□□ 0
CCDC88B-205ENST00000472524 GPR83Q9NYM4 423 aa15.06■□□□□ 0
CCDC88B-205ENST00000472524 SNX12Q9UMY4 172 aa15.06■□□□□ 0
CCDC88B-205ENST00000472524 ZNF451Q9Y4E5 1061 aa15.06■□□□□ 0
CCDC88B-205ENST00000472524 FAM169AQ9Y6X4 670 aa15.06■□□□□ 0
CCDC88B-205ENST00000472524 A0A0J9YVX5 310 aa15.05■□□□□ -0
CCDC88B-205ENST00000472524 TARM1B6A8C7 271 aa15.05■□□□□ -0
CCDC88B-205ENST00000472524 PEX12O00623 359 aa15.05■□□□□ -0
CCDC88B-205ENST00000472524 DSCR3O14972 297 aa15.05■□□□□ -0
CCDC88B-205ENST00000472524 PSIP1O75475 530 aaKnown RBP15.05■□□□□ -0
CCDC88B-205ENST00000472524 SORBS2O94875 1100 aaKnown RBP15.05■□□□□ -0
CCDC88B-205ENST00000472524 AGFG2O95081 481 aa15.05■□□□□ -0
CCDC88B-205ENST00000472524 CATP04040 527 aaKnown RBP15.05■□□□□ -0
CCDC88B-205ENST00000472524 CD63P08962 238 aa15.05■□□□□ -0
CCDC88B-205ENST00000472524 RNF224P0DH78 156 aa15.05■□□□□ -0
CCDC88B-205ENST00000472524 ITGAXP20702 1163 aa15.05■□□□□ -0
CCDC88B-205ENST00000472524 CMPK1P30085 196 aa15.05■□□□□ -0
CCDC88B-205ENST00000472524 GCGRP47871 477 aa15.05■□□□□ -0
CCDC88B-205ENST00000472524 CLCN7P51798 805 aa15.05■□□□□ -0
CCDC88B-205ENST00000472524 YBX1P67809 324 aaKnown RBP15.05■□□□□ -0
CCDC88B-205ENST00000472524 MPP1Q00013 466 aa15.05■□□□□ -0
CCDC88B-205ENST00000472524 GRM7Q14831 915 aa15.05■□□□□ -0
CCDC88B-205ENST00000472524 CYP2A13Q16696 494 aa15.05■□□□□ -0
CCDC88B-205ENST00000472524 PRR30Q53SZ7 412 aaPredicted RBP15.05■□□□□ -0
CCDC88B-205ENST00000472524 PAPD7Q5XG87 772 aaKnown RBP15.05■□□□□ -0
CCDC88B-205ENST00000472524 FRMPD2BQ6IN97 320 aa15.05■□□□□ -0
CCDC88B-205ENST00000472524 MRPL14Q6P1L8 145 aaKnown RBP15.05■□□□□ -0
CCDC88B-205ENST00000472524 SUSD1Q6UWL2 747 aa15.05■□□□□ -0
CCDC88B-205ENST00000472524 OR2A1Q8NGT9 310 aa15.05■□□□□ -0
CCDC88B-205ENST00000472524 GIMAP7Q8NHV1 300 aa15.05■□□□□ -0
CCDC88B-205ENST00000472524 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.05■□□□□ -0
CCDC88B-205ENST00000472524 SIGLEC10Q96LC7 697 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms