RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 MAK16Q9BXY0 300 aaKnown RBP3.72□□□□□ -1.81
CD46-213ENST00000471987 MTMR12Q9C0I1 747 aa3.72□□□□□ -1.81
CD46-213ENST00000471987 MYH16Q9H6N6 1097 aa3.72□□□□□ -1.81
CD46-213ENST00000471987 CHST11Q9NPF2 352 aa3.72□□□□□ -1.81
CD46-213ENST00000471987 DPP3Q9NY33 737 aa3.72□□□□□ -1.81
CD46-213ENST00000471987 STK26Q9P289 416 aa3.72□□□□□ -1.81
CD46-213ENST00000471987 SUCLA2Q9P2R7 463 aaPredicted RBP3.72□□□□□ -1.81
CD46-213ENST00000471987 WIPI2Q9Y4P8 454 aa3.72□□□□□ -1.81
CD46-213ENST00000471987 OR2A25A4D2G3 310 aa3.71□□□□□ -1.82
CD46-213ENST00000471987 TMEM221A6NGB7 291 aa3.71□□□□□ -1.82
CD46-213ENST00000471987 A8MXK9 166 aa3.71□□□□□ -1.82
CD46-213ENST00000471987 VILLO15195 856 aa3.71□□□□□ -1.82
CD46-213ENST00000471987 PTP4A3O75365 173 aa3.71□□□□□ -1.82
CD46-213ENST00000471987 PRKAR1AP10644 381 aa3.71□□□□□ -1.82
CD46-213ENST00000471987 IL4RP24394 825 aa3.71□□□□□ -1.82
CD46-213ENST00000471987 CAPGP40121 348 aa3.71□□□□□ -1.82
CD46-213ENST00000471987 KRTAP10-8P60410 259 aa3.71□□□□□ -1.82
CD46-213ENST00000471987 DCAF7P61962 342 aa3.71□□□□□ -1.82
CD46-213ENST00000471987 MAT1AQ00266 395 aaKnown RBP3.71□□□□□ -1.82
CD46-213ENST00000471987 ZFP36L1Q07352 338 aaKnown RBP3.71□□□□□ -1.82
CD46-213ENST00000471987 SYT14P1Q58G82 188 aa3.71□□□□□ -1.82
CD46-213ENST00000471987 CCDC70Q6NSX1 233 aa3.71□□□□□ -1.82
CD46-213ENST00000471987 TEX38Q6PEX7 206 aa3.71□□□□□ -1.82
CD46-213ENST00000471987 GDPGP1Q6ZNW5 385 aa3.71□□□□□ -1.82
CD46-213ENST00000471987 CHPT1Q8WUD6 406 aa3.71□□□□□ -1.82
CD46-213ENST00000471987 CDRT15Q96T59 188 aa3.71□□□□□ -1.82
CD46-213ENST00000471987 OLFM1Q99784 485 aa3.71□□□□□ -1.82
CD46-213ENST00000471987 WSB2Q9NYS7 404 aaPredicted RBP3.71□□□□□ -1.82
CD46-213ENST00000471987 CTSZQ9UBR2 303 aa3.71□□□□□ -1.82
CD46-213ENST00000471987 ZNF510Q9Y2H8 683 aa3.71□□□□□ -1.82
CD46-213ENST00000471987 CROCCQ5TZA2 2017 aa3.7□□□□□ -1.82
CD46-213ENST00000471987 CTDSP2O14595 271 aa3.7□□□□□ -1.82
CD46-213ENST00000471987 AP3D1O14617 1153 aa3.7□□□□□ -1.82
CD46-213ENST00000471987 EPB41L2O43491 1005 aaKnown RBP3.7□□□□□ -1.82
CD46-213ENST00000471987 CEACAM4O75871 244 aa3.7□□□□□ -1.82
CD46-213ENST00000471987 PTPN3P26045 913 aa3.7□□□□□ -1.82
CD46-213ENST00000471987 ZFP36L2P47974 494 aaKnown RBP3.7□□□□□ -1.82
CD46-213ENST00000471987 XGP55808 180 aa3.7□□□□□ -1.82
CD46-213ENST00000471987 PLEKHS1Q5SXH7 462 aa3.7□□□□□ -1.82
CD46-213ENST00000471987 ZFAND4Q86XD8 727 aa3.7□□□□□ -1.82
CD46-213ENST00000471987 CNPY4Q8N129 248 aa3.7□□□□□ -1.82
CD46-213ENST00000471987 GPATCH11Q8N954 259 aa3.7□□□□□ -1.82
CD46-213ENST00000471987 MCUQ8NE86 351 aa3.7□□□□□ -1.82
CD46-213ENST00000471987 C11orf45Q8TAV5 145 aa3.7□□□□□ -1.82
CD46-213ENST00000471987 NPRL2Q8WTW4 380 aa3.7□□□□□ -1.82
CD46-213ENST00000471987 ATXN7L3BQ96GX2 97 aa3.7□□□□□ -1.82
CD46-213ENST00000471987 FAM20AQ96MK3 541 aa3.7□□□□□ -1.82
CD46-213ENST00000471987 PAFAH2Q99487 392 aa3.7□□□□□ -1.82
CD46-213ENST00000471987 LPAR4Q99677 370 aa3.7□□□□□ -1.82
CD46-213ENST00000471987 HOXD1Q9GZZ0 328 aa3.7□□□□□ -1.82
CD46-213ENST00000471987 WNT5BQ9H1J7 359 aa3.7□□□□□ -1.82
CD46-213ENST00000471987 WBP11Q9Y2W2 641 aaKnown RBP3.7□□□□□ -1.82
CD46-213ENST00000471987 ABCA7Q8IZY2 2146 aa3.7□□□□□ -1.82
CD46-213ENST00000471987 MEIS2O14770 477 aa3.69□□□□□ -1.82
CD46-213ENST00000471987 TEX28O15482 410 aa3.69□□□□□ -1.82
CD46-213ENST00000471987 HOXD4P09016 255 aaPredicted RBP3.69□□□□□ -1.82
CD46-213ENST00000471987 DUX4L4P0CJ87 422 aa3.69□□□□□ -1.82
CD46-213ENST00000471987 SMIM18P0DKX4 95 aa3.69□□□□□ -1.82
CD46-213ENST00000471987 FOLR2P14207 255 aa3.69□□□□□ -1.82
CD46-213ENST00000471987 RPL35AP18077 110 aaKnown RBP3.69□□□□□ -1.82
CD46-213ENST00000471987 UGT3A2Q3SY77 523 aa3.69□□□□□ -1.82
CD46-213ENST00000471987 GORABQ5T7V8 394 aa3.69□□□□□ -1.82
CD46-213ENST00000471987 RNASEH2BQ5TBB1 312 aaKnown RBP3.69□□□□□ -1.82
CD46-213ENST00000471987 CCDC30Q5VVM6 783 aa3.69□□□□□ -1.82
CD46-213ENST00000471987 LEKR1Q6ZMV7 388 aa3.69□□□□□ -1.82
CD46-213ENST00000471987 ADGRA1Q86SQ6 560 aa3.69□□□□□ -1.82
CD46-213ENST00000471987 TMPRSS11BQ86T26 416 aa3.69□□□□□ -1.82
CD46-213ENST00000471987 SLAMF9Q96A28 289 aa3.69□□□□□ -1.82
CD46-213ENST00000471987 NYXQ9GZU5 481 aa3.69□□□□□ -1.82
CD46-213ENST00000471987 TUBB1Q9H4B7 451 aa3.69□□□□□ -1.82
CD46-213ENST00000471987 SYNCQ9H7C4 482 aa3.69□□□□□ -1.82
CD46-213ENST00000471987 HEXA-AS1Q9H8Q6 139 aa3.69□□□□□ -1.82
CD46-213ENST00000471987 GPN1Q9HCN4 374 aaPredicted RBP3.69□□□□□ -1.82
CD46-213ENST00000471987 Q9N2K0 584 aa3.69□□□□□ -1.82
CD46-213ENST00000471987 PRRC2AP48634 2157 aaKnown RBP3.68□□□□□ -1.82
CD46-213ENST00000471987 LOC100509620A0A075B734 347 aa3.68□□□□□ -1.82
CD46-213ENST00000471987 FEZF1A0PJY2 475 aa3.68□□□□□ -1.82
CD46-213ENST00000471987 HMGB1P1B2RPK0 211 aaPredicted RBP3.68□□□□□ -1.82
CD46-213ENST00000471987 O00370 1275 aa3.68□□□□□ -1.82
CD46-213ENST00000471987 PHOX2AO14813 284 aa3.68□□□□□ -1.82
CD46-213ENST00000471987 TRIM21P19474 475 aaKnown RBP3.68□□□□□ -1.82
CD46-213ENST00000471987 PDHA2P29803 388 aa3.68□□□□□ -1.82
CD46-213ENST00000471987 OXTRP30559 389 aa3.68□□□□□ -1.82
CD46-213ENST00000471987 PTGER4P35408 488 aa3.68□□□□□ -1.82
CD46-213ENST00000471987 KLC1Q07866 573 aa3.68□□□□□ -1.82
CD46-213ENST00000471987 CDH18Q13634 790 aa3.68□□□□□ -1.82
CD46-213ENST00000471987 TAB1Q15750 504 aa3.68□□□□□ -1.82
CD46-213ENST00000471987 ZNF841Q6ZN19 808 aa3.68□□□□□ -1.82
CD46-213ENST00000471987 ZER1Q7Z7L7 766 aa3.68□□□□□ -1.82
CD46-213ENST00000471987 SLC37A3Q8NCC5 494 aa3.68□□□□□ -1.82
CD46-213ENST00000471987 OR5T2Q8NGG2 359 aa3.68□□□□□ -1.82
CD46-213ENST00000471987 PTPMT1Q8WUK0 201 aaPredicted RBP3.68□□□□□ -1.82
CD46-213ENST00000471987 C4orf45Q96LM5 186 aa3.68□□□□□ -1.82
CD46-213ENST00000471987 SFXN2Q96NB2 322 aa3.68□□□□□ -1.82
CD46-213ENST00000471987 PSMB7Q99436 277 aa3.68□□□□□ -1.82
CD46-213ENST00000471987 OVOL2Q9BRP0 275 aa3.68□□□□□ -1.82
CD46-213ENST00000471987 TDRD1Q9BXT4 1180 aaKnown RBP3.68□□□□□ -1.82
CD46-213ENST00000471987 EQTNQ9NQ60 294 aa3.68□□□□□ -1.82
CD46-213ENST00000471987 PA2G4Q9UQ80 394 aaKnown RBP3.68□□□□□ -1.82
CD46-213ENST00000471987 ARPC2O15144 300 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms