RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 CST1P01037 141 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 ACRP10323 421 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 THRBP10828 461 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 SDC1P18827 310 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 ITGB8P26012 769 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 MTHFRP42898 656 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 KIR3DL1P43629 444 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 ASMTP46597 345 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 PRLHRP49683 370 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 ERVFC1P60507 584 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 PFN3P60673 137 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 SEMG2Q02383 582 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 DUOXA1Q1HG43 343 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 GRHL2Q6ISB3 625 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 NOXRED1Q6NXP6 359 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 Q6ZVL8 140 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 DET1Q7L5Y6 550 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 OTOP2Q7RTS6 562 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 CYP2U1Q7Z449 544 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 SERPINA11Q86U17 422 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 ERI1Q8IV48 349 aaKnown RBP10.33□□□□□ -0.76
APLF-204ENST00000471727 MSRB3Q8IXL7 192 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 CLEC4FQ8N1N0 589 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 KRTCAP2Q8N6L1 136 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 OR5K1Q8NHB7 308 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 TMBIM1Q969X1 311 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 REPS1Q96D71 796 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 MTFMTQ96DP5 389 aaKnown RBP10.33□□□□□ -0.76
APLF-204ENST00000471727 TCEAL4Q96EI5 215 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 TUBA1CQ9BQE3 449 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 RIOK2Q9BVS4 552 aaKnown RBP10.33□□□□□ -0.76
APLF-204ENST00000471727 ZCCHC2Q9C0B9 1178 aaKnown RBP10.33□□□□□ -0.76
APLF-204ENST00000471727 HCFC1R1Q9NWW0 138 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 VPS29Q9UBQ0 182 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 CD84Q9UIB8 345 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 USP22Q9UPT9 525 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 SAMD4AQ9UPU9 718 aaKnown RBP10.33□□□□□ -0.76
APLF-204ENST00000471727 SLC5A10A0PJK1 596 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 EME2A4GXA9 379 aaPredicted RBP10.33□□□□□ -0.76
APLF-204ENST00000471727 H3BSA7 217 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 NRG2O14511 850 aaPredicted RBP10.33□□□□□ -0.76
APLF-204ENST00000471727 RFXANKO14593 260 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 SGTAO43765 313 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 TRMUO75648 421 aaKnown RBP10.33□□□□□ -0.76
APLF-204ENST00000471727 CCNDBP1O95273 360 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 PRNPP04156 253 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 ALPLP05186 524 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 HOXB9P17482 250 aaPredicted RBP10.33□□□□□ -0.76
APLF-204ENST00000471727 SYN1P17600 705 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 PPIBP23284 216 aaKnown RBP10.33□□□□□ -0.76
APLF-204ENST00000471727 HLCSP50747 726 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 GZMMP51124 257 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 TOP3AQ13472 1001 aaPredicted RBP10.33□□□□□ -0.76
APLF-204ENST00000471727 PRSS36Q5K4E3 855 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 RBM48Q5RL73 367 aaKnown RBP10.33□□□□□ -0.76
APLF-204ENST00000471727 PLPP4Q5VZY2 271 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 ZNF765Q7L2R6 523 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 STK32CQ86UX6 486 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 NLRP8Q86W28 1048 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 THOC6Q86W42 341 aaKnown RBP10.33□□□□□ -0.76
APLF-204ENST00000471727 HIPK1Q86Z02 1210 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 SYT12Q8IV01 421 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 VRK3Q8IV63 474 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 ZCCHC7Q8N3Z6 543 aaKnown RBP10.33□□□□□ -0.76
APLF-204ENST00000471727 CELF5Q8N6W0 485 aaKnown RBP10.33□□□□□ -0.76
APLF-204ENST00000471727 ZNF555Q8NEP9 628 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 VPS37AQ8NEZ2 397 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 OR8J2Q8NGG1 315 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 OR56A3Q8NH54 315 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 ZNF420Q8TAQ5 688 aaPredicted RBP10.33□□□□□ -0.76
APLF-204ENST00000471727 WDR20Q8TBZ3 569 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 PHOSPHO2Q8TCD6 241 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 SCAMP4Q969E2 229 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 PYURFQ96I23 114 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 PAWRQ96IZ0 340 aaKnown RBP10.33□□□□□ -0.76
APLF-204ENST00000471727 HIC2Q96JB3 615 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 ABCG8Q9H221 673 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 LINC00597Q9H2U6 94 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 SERHLQ9NQF3 203 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 TLR9Q9NR96 1032 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 SPATA6Q9NWH7 488 aaPredicted RBP10.33□□□□□ -0.76
APLF-204ENST00000471727 IFT80Q9P2H3 777 aaPredicted RBP10.33□□□□□ -0.76
APLF-204ENST00000471727 CORO2BQ9UQ03 480 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 DLGAP4Q9Y2H0 992 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 SLC27A6Q9Y2P4 619 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 GMEB1Q9Y692 573 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 HTTP42858 3142 aa10.32□□□□□ -0.76
APLF-204ENST00000471727 MYOCOSA0A1B0GUC4 107 aa10.32□□□□□ -0.76
APLF-204ENST00000471727 TTC34A8MYJ7 566 aa10.32□□□□□ -0.76
APLF-204ENST00000471727 HOXC11O43248 304 aaPredicted RBP10.32□□□□□ -0.76
APLF-204ENST00000471727 ADH1CP00326 375 aa10.32□□□□□ -0.76
APLF-204ENST00000471727 CISD3P0C7P0 127 aa10.32□□□□□ -0.76
APLF-204ENST00000471727 ELFN1P0C7U0 828 aa10.32□□□□□ -0.76
APLF-204ENST00000471727 ETS2P15036 469 aa10.32□□□□□ -0.76
APLF-204ENST00000471727 CTNNB1P35222 781 aa10.32□□□□□ -0.76
APLF-204ENST00000471727 MMP12P39900 470 aa10.32□□□□□ -0.76
APLF-204ENST00000471727 ETV3P41162 512 aa10.32□□□□□ -0.76
APLF-204ENST00000471727 DGKGP49619 791 aa10.32□□□□□ -0.76
APLF-204ENST00000471727 NUP107P57740 925 aa10.32□□□□□ -0.76
APLF-204ENST00000471727 ELP6Q0PNE2 266 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms