RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 BAZ2AQ9UIF9 1905 aaKnown RBP4.99□□□□□ -1.61
CCDC39-202ENST00000471307 TEX13DA0A0J9YY54 714 aaPredicted RBP4.99□□□□□ -1.61
CCDC39-202ENST00000471307 GLTPD2A6NH11 291 aa4.99□□□□□ -1.61
CCDC39-202ENST00000471307 ERI2A8K979 691 aaKnown RBP4.99□□□□□ -1.61
CCDC39-202ENST00000471307 A8MZ25 164 aa4.99□□□□□ -1.61
CCDC39-202ENST00000471307 SLCO1B7G3V0H7 640 aa4.99□□□□□ -1.61
CCDC39-202ENST00000471307 TMEM189-UBE2V1I3L0A0 370 aa4.99□□□□□ -1.61
CCDC39-202ENST00000471307 CSPG5O95196 566 aa4.99□□□□□ -1.61
CCDC39-202ENST00000471307 CASTP20810 708 aaKnown RBP4.99□□□□□ -1.61
CCDC39-202ENST00000471307 CD81P60033 236 aa4.99□□□□□ -1.61
CCDC39-202ENST00000471307 HAND2P61296 217 aa4.99□□□□□ -1.61
CCDC39-202ENST00000471307 POU5F1Q01860 360 aaKnown RBP4.99□□□□□ -1.61
CCDC39-202ENST00000471307 UBE2V1Q13404 147 aa4.99□□□□□ -1.61
CCDC39-202ENST00000471307 BECN1Q14457 450 aa4.99□□□□□ -1.61
CCDC39-202ENST00000471307 FAAP20Q6NZ36 180 aa4.99□□□□□ -1.61
CCDC39-202ENST00000471307 BLOC1S2Q6QNY1 142 aa4.99□□□□□ -1.61
CCDC39-202ENST00000471307 C4orf50Q6ZRC1 276 aa4.99□□□□□ -1.61
CCDC39-202ENST00000471307 PXKQ7Z7A4 578 aa4.99□□□□□ -1.61
CCDC39-202ENST00000471307 TICAM1Q8IUC6 712 aa4.99□□□□□ -1.61
CCDC39-202ENST00000471307 PLD3Q8IV08 490 aa4.99□□□□□ -1.61
CCDC39-202ENST00000471307 FBXL16Q8N461 479 aa4.99□□□□□ -1.61
CCDC39-202ENST00000471307 HJURPQ8NCD3 748 aaPredicted RBP4.99□□□□□ -1.61
CCDC39-202ENST00000471307 C1orf131Q8NDD1 294 aaKnown RBP4.99□□□□□ -1.61
CCDC39-202ENST00000471307 DDHD1Q8NEL9 900 aa4.99□□□□□ -1.61
CCDC39-202ENST00000471307 FAM151AQ8WW52 585 aa4.99□□□□□ -1.61
CCDC39-202ENST00000471307 ZKSCAN4Q969J2 545 aaPredicted RBP4.99□□□□□ -1.61
CCDC39-202ENST00000471307 PSD2Q9BQI7 771 aa4.99□□□□□ -1.61
CCDC39-202ENST00000471307 SEMA6AQ9H2E6 1030 aa4.99□□□□□ -1.61
CCDC39-202ENST00000471307 DENND2DQ9H6A0 471 aaPredicted RBP4.99□□□□□ -1.61
CCDC39-202ENST00000471307 TDRD3Q9H7E2 651 aaKnown RBP4.99□□□□□ -1.61
CCDC39-202ENST00000471307 PDRG1Q9NUG6 133 aa4.99□□□□□ -1.61
CCDC39-202ENST00000471307 NRBP1Q9UHY1 535 aa4.99□□□□□ -1.61
CCDC39-202ENST00000471307 ECM29Q5VYK3 1845 aa4.99□□□□□ -1.61
CCDC39-202ENST00000471307 MYH1P12882 1939 aa4.99□□□□□ -1.61
CCDC39-202ENST00000471307 CDK5RAP2Q96SN8 1893 aa4.98□□□□□ -1.61
CCDC39-202ENST00000471307 FOCADQ5VW36 1801 aa4.98□□□□□ -1.61
CCDC39-202ENST00000471307 B4E171 279 aa4.98□□□□□ -1.61
CCDC39-202ENST00000471307 SLC22A2O15244 555 aa4.98□□□□□ -1.61
CCDC39-202ENST00000471307 ARHGEF9O43307 516 aa4.98□□□□□ -1.61
CCDC39-202ENST00000471307 FIBPO43427 364 aa4.98□□□□□ -1.61
CCDC39-202ENST00000471307 HS6ST1O60243 411 aa4.98□□□□□ -1.61
CCDC39-202ENST00000471307 EML2O95834 649 aa4.98□□□□□ -1.61
CCDC39-202ENST00000471307 SRPRAP08240 638 aaKnown RBP4.98□□□□□ -1.61
CCDC39-202ENST00000471307 FAM157CP0CG43 387 aa4.98□□□□□ -1.61
CCDC39-202ENST00000471307 LAMP2P13473 410 aa4.98□□□□□ -1.61
CCDC39-202ENST00000471307 TSPAN7P41732 249 aa4.98□□□□□ -1.61
CCDC39-202ENST00000471307 EPS15P42566 896 aa4.98□□□□□ -1.61
CCDC39-202ENST00000471307 NAP1L1P55209 391 aaKnown RBP4.98□□□□□ -1.61
CCDC39-202ENST00000471307 IRX1P78414 480 aaPredicted RBP4.98□□□□□ -1.61
CCDC39-202ENST00000471307 KCNJ10P78508 379 aa4.98□□□□□ -1.61
CCDC39-202ENST00000471307 TUBB2AQ13885 445 aa4.98□□□□□ -1.61
CCDC39-202ENST00000471307 GKAP1Q5VSY0 366 aaPredicted RBP4.98□□□□□ -1.61
CCDC39-202ENST00000471307 MZT2BQ6NZ67 158 aa4.98□□□□□ -1.61
CCDC39-202ENST00000471307 TMEM154Q6P9G4 183 aa4.98□□□□□ -1.61
CCDC39-202ENST00000471307 CFAP77Q6ZQR2 320 aa4.98□□□□□ -1.61
CCDC39-202ENST00000471307 STOX1Q6ZVD7 989 aa4.98□□□□□ -1.61
CCDC39-202ENST00000471307 ZNF444Q8N0Y2 327 aaPredicted RBP4.98□□□□□ -1.61
CCDC39-202ENST00000471307 L3MBTL4Q8NA19 623 aa4.98□□□□□ -1.61
CCDC39-202ENST00000471307 ESR2Q92731 530 aa4.98□□□□□ -1.61
CCDC39-202ENST00000471307 ELMOD3Q96FG2 381 aa4.98□□□□□ -1.61
CCDC39-202ENST00000471307 SLC47A1Q96FL8 570 aa4.98□□□□□ -1.61
CCDC39-202ENST00000471307 ART5Q96L15 291 aa4.98□□□□□ -1.61
CCDC39-202ENST00000471307 ZNF599Q96NL3 588 aa4.98□□□□□ -1.61
CCDC39-202ENST00000471307 OPRPNQ99935 248 aaPredicted RBP4.98□□□□□ -1.61
CCDC39-202ENST00000471307 TUBB2BQ9BVA1 445 aa4.98□□□□□ -1.61
CCDC39-202ENST00000471307 UPF3BQ9BZI7 483 aaKnown RBP4.98□□□□□ -1.61
CCDC39-202ENST00000471307 FGF22Q9HCT0 170 aa4.98□□□□□ -1.61
CCDC39-202ENST00000471307 SIX2Q9NPC8 291 aa4.98□□□□□ -1.61
CCDC39-202ENST00000471307 SETD4Q9NVD3 440 aa4.98□□□□□ -1.61
CCDC39-202ENST00000471307 NENFQ9UMX5 172 aa4.98□□□□□ -1.61
CCDC39-202ENST00000471307 SESN1Q9Y6P5 492 aa4.98□□□□□ -1.61
CCDC39-202ENST00000471307 RNF215Q9Y6U7 377 aa4.98□□□□□ -1.61
CCDC39-202ENST00000471307 PIAS3Q9Y6X2 628 aa4.98□□□□□ -1.61
CCDC39-202ENST00000471307 ROBO3Q96MS0 1386 aa4.97□□□□□ -1.61
CCDC39-202ENST00000471307 CLRN2A0PK11 232 aa4.97□□□□□ -1.61
CCDC39-202ENST00000471307 ERICH2A1L162 156 aa4.97□□□□□ -1.61
CCDC39-202ENST00000471307 MAGEB17A8MXT2 336 aa4.97□□□□□ -1.61
CCDC39-202ENST00000471307 TCP10L2B9ZVM9 353 aa4.97□□□□□ -1.61
CCDC39-202ENST00000471307 EXTL3O43909 919 aa4.97□□□□□ -1.61
CCDC39-202ENST00000471307 GH2P01242 217 aa4.97□□□□□ -1.61
CCDC39-202ENST00000471307 H1F0P07305 194 aaKnown RBP4.97□□□□□ -1.61
CCDC39-202ENST00000471307 EPHA2P29317 976 aa4.97□□□□□ -1.61
CCDC39-202ENST00000471307 EVCP57679 992 aa4.97□□□□□ -1.61
CCDC39-202ENST00000471307 GABPAQ06546 454 aa4.97□□□□□ -1.61
CCDC39-202ENST00000471307 TCP10Q12799 353 aa4.97□□□□□ -1.61
CCDC39-202ENST00000471307 ZFP69Q49AA0 526 aa4.97□□□□□ -1.61
CCDC39-202ENST00000471307 ALS2CLQ60I27 953 aa4.97□□□□□ -1.61
CCDC39-202ENST00000471307 SH2D5Q6ZV89 423 aa4.97□□□□□ -1.61
CCDC39-202ENST00000471307 USP50Q70EL3 339 aaPredicted RBP4.97□□□□□ -1.61
CCDC39-202ENST00000471307 ISCA2Q86U28 154 aa4.97□□□□□ -1.61
CCDC39-202ENST00000471307 IQCA1Q86XH1 822 aa4.97□□□□□ -1.61
CCDC39-202ENST00000471307 GALNT13Q8IUC8 556 aa4.97□□□□□ -1.61
CCDC39-202ENST00000471307 APOBEC3FQ8IUX4 373 aaKnown RBP4.97□□□□□ -1.61
CCDC39-202ENST00000471307 TBC1D10CQ8IV04 446 aa4.97□□□□□ -1.61
CCDC39-202ENST00000471307 HSCBQ8IWL3 235 aa4.97□□□□□ -1.61
CCDC39-202ENST00000471307 HDAC2Q92769 488 aaKnown RBP4.97□□□□□ -1.61
CCDC39-202ENST00000471307 PGAM5Q96HS1 289 aa4.97□□□□□ -1.61
CCDC39-202ENST00000471307 SLC22A12Q96S37 553 aa4.97□□□□□ -1.61
CCDC39-202ENST00000471307 RHNO1Q9BSD3 238 aa4.97□□□□□ -1.61
CCDC39-202ENST00000471307 INTS10Q9NVR2 710 aaKnown RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms