RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.02■□□□□ 0.64
HDAC7-220ENST00000471235 NOVA2Q9UNW9 492 aaKnown RBP19.02■□□□□ 0.64
HDAC7-220ENST00000471235 V9GYY5 206 aaPredicted RBP19.02■□□□□ 0.64
HDAC7-220ENST00000471235 A0A087WV48 116 aa19.01■□□□□ 0.63
HDAC7-220ENST00000471235 STMND1H3BQB6 276 aa19.01■□□□□ 0.63
HDAC7-220ENST00000471235 STK17BO94768 372 aa19.01■□□□□ 0.63
HDAC7-220ENST00000471235 DLGAP3O95886 979 aa19.01■□□□□ 0.63
HDAC7-220ENST00000471235 INHBAP08476 426 aa19.01■□□□□ 0.63
HDAC7-220ENST00000471235 SLC35E2BP0CK96 405 aa19.01■□□□□ 0.63
HDAC7-220ENST00000471235 CCDC166P0CW27 439 aa19.01■□□□□ 0.63
HDAC7-220ENST00000471235 ZNF28P17035 718 aa19.01■□□□□ 0.63
HDAC7-220ENST00000471235 GABRA4P48169 554 aa19.01■□□□□ 0.63
HDAC7-220ENST00000471235 AP1S2P56377 157 aa19.01■□□□□ 0.63
HDAC7-220ENST00000471235 TBPL1P62380 186 aa19.01■□□□□ 0.63
HDAC7-220ENST00000471235 VSNL1P62760 191 aa19.01■□□□□ 0.63
HDAC7-220ENST00000471235 YBX1P67809 324 aaKnown RBP19.01■□□□□ 0.63
HDAC7-220ENST00000471235 CLN3Q13286 438 aa19.01■□□□□ 0.63
HDAC7-220ENST00000471235 TSNQ15631 228 aaKnown RBP19.01■□□□□ 0.63
HDAC7-220ENST00000471235 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.01■□□□□ 0.63
HDAC7-220ENST00000471235 FCRL6Q6DN72 434 aa19.01■□□□□ 0.63
HDAC7-220ENST00000471235 DTX1Q86Y01 620 aa19.01■□□□□ 0.63
HDAC7-220ENST00000471235 DCAKDQ8WVC6 231 aa19.01■□□□□ 0.63
HDAC7-220ENST00000471235 ACAT2Q9BWD1 397 aa19.01■□□□□ 0.63
HDAC7-220ENST00000471235 SPRY4Q9C004 299 aa19.01■□□□□ 0.63
HDAC7-220ENST00000471235 FANCEQ9HB96 536 aa19.01■□□□□ 0.63
HDAC7-220ENST00000471235 SLC6A20Q9NP91 592 aa19.01■□□□□ 0.63
HDAC7-220ENST00000471235 INTS7Q9NVH2 962 aaKnown RBP19.01■□□□□ 0.63
HDAC7-220ENST00000471235 ARL15Q9NXU5 204 aa19.01■□□□□ 0.63
HDAC7-220ENST00000471235 CTNNAL1Q9UBT7 734 aa19.01■□□□□ 0.63
HDAC7-220ENST00000471235 TAC3Q9UHF0 121 aa19.01■□□□□ 0.63
HDAC7-220ENST00000471235 TMEM184BQ9Y519 407 aaPredicted RBP19.01■□□□□ 0.63
HDAC7-220ENST00000471235 EXOC1LA0A1B0GW35 172 aa19■□□□□ 0.63
HDAC7-220ENST00000471235 PABPN1LA6NDY0 278 aaKnown RBP19■□□□□ 0.63
HDAC7-220ENST00000471235 TMEM150CB9EJG8 249 aa19■□□□□ 0.63
HDAC7-220ENST00000471235 POC1B-GALNT4F8VUJ3 575 aa19■□□□□ 0.63
HDAC7-220ENST00000471235 RRP8O43159 456 aaKnown RBP19■□□□□ 0.63
HDAC7-220ENST00000471235 MAP3K7O43318 606 aa19■□□□□ 0.63
HDAC7-220ENST00000471235 HCRTR1O43613 425 aa19■□□□□ 0.63
HDAC7-220ENST00000471235 HIST1H2AGP0C0S8 130 aaPredicted RBP19■□□□□ 0.63
HDAC7-220ENST00000471235 HIST1H2ADP20671 130 aa19■□□□□ 0.63
HDAC7-220ENST00000471235 CMPK1P30085 196 aa19■□□□□ 0.63
HDAC7-220ENST00000471235 GRIA3P42263 894 aa19■□□□□ 0.63
HDAC7-220ENST00000471235 CSRP3P50461 194 aa19■□□□□ 0.63
HDAC7-220ENST00000471235 CSHL1Q14406 222 aa19■□□□□ 0.63
HDAC7-220ENST00000471235 TGIF1Q15583 401 aa19■□□□□ 0.63
HDAC7-220ENST00000471235 PWWP2BQ6NUJ5 590 aa19■□□□□ 0.63
HDAC7-220ENST00000471235 FIGLAQ6QHK4 219 aa19■□□□□ 0.63
HDAC7-220ENST00000471235 AGTRAPQ6RW13 159 aa19■□□□□ 0.63
HDAC7-220ENST00000471235 RAPH1Q70E73 1250 aa19■□□□□ 0.63
HDAC7-220ENST00000471235 ADAMTSL2Q86TH1 951 aa19■□□□□ 0.63
HDAC7-220ENST00000471235 SPACA3Q8IXA5 215 aa19■□□□□ 0.63
HDAC7-220ENST00000471235 SPATA6LQ8N4H0 392 aa19■□□□□ 0.63
HDAC7-220ENST00000471235 OR8K5Q8NH50 307 aa19■□□□□ 0.63
HDAC7-220ENST00000471235 OR1L3Q8NH93 324 aa19■□□□□ 0.63
HDAC7-220ENST00000471235 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19■□□□□ 0.63
HDAC7-220ENST00000471235 FBXL8Q96CD0 374 aa19■□□□□ 0.63
HDAC7-220ENST00000471235 HIST1H2AHQ96KK5 128 aa19■□□□□ 0.63
HDAC7-220ENST00000471235 UBXN10Q96LJ8 280 aa19■□□□□ 0.63
HDAC7-220ENST00000471235 HIST1H2AJQ99878 128 aa19■□□□□ 0.63
HDAC7-220ENST00000471235 H2AFJQ9BTM1 129 aa19■□□□□ 0.63
HDAC7-220ENST00000471235 TRIM54Q9BYV2 358 aa19■□□□□ 0.63
HDAC7-220ENST00000471235 ULBP3Q9BZM4 244 aa19■□□□□ 0.63
HDAC7-220ENST00000471235 CCDC177Q9NQR7 707 aaPredicted RBP19■□□□□ 0.63
HDAC7-220ENST00000471235 SNX15Q9NRS6 342 aa19■□□□□ 0.63
HDAC7-220ENST00000471235 ABCF3Q9NUQ8 709 aa19■□□□□ 0.63
HDAC7-220ENST00000471235 UTP6Q9NYH9 597 aaKnown RBP19■□□□□ 0.63
HDAC7-220ENST00000471235 OARD1Q9Y530 152 aa19■□□□□ 0.63
HDAC7-220ENST00000471235 KLK4Q9Y5K2 254 aa19■□□□□ 0.63
HDAC7-220ENST00000471235 CELSR3Q9NYQ7 3312 aa18.99■□□□□ 0.63
HDAC7-220ENST00000471235 NRP2O60462 931 aa18.99■□□□□ 0.63
HDAC7-220ENST00000471235 KIAA0754O94854 1291 aa18.99■□□□□ 0.63
HDAC7-220ENST00000471235 CD1DP15813 335 aa18.99■□□□□ 0.63
HDAC7-220ENST00000471235 CRABP2P29373 138 aa18.99■□□□□ 0.63
HDAC7-220ENST00000471235 MSH2P43246 934 aa18.99■□□□□ 0.63
HDAC7-220ENST00000471235 SERPINB8P50452 374 aa18.99■□□□□ 0.63
HDAC7-220ENST00000471235 SERPINB9P50453 376 aa18.99■□□□□ 0.63
HDAC7-220ENST00000471235 DLG1Q12959 904 aa18.99■□□□□ 0.63
HDAC7-220ENST00000471235 ICE2Q659A1 982 aa18.99■□□□□ 0.63
HDAC7-220ENST00000471235 BPHLQ86WA6 291 aaPredicted RBP18.99■□□□□ 0.63
HDAC7-220ENST00000471235 DNAJC22Q8N4W6 341 aa18.99■□□□□ 0.63
HDAC7-220ENST00000471235 DPH1Q9BZG8 443 aa18.99■□□□□ 0.63
HDAC7-220ENST00000471235 ATG10Q9H0Y0 220 aa18.99■□□□□ 0.63
HDAC7-220ENST00000471235 ZNF180Q9UJW8 692 aa18.99■□□□□ 0.63
HDAC7-220ENST00000471235 PILRAQ9UKJ1 303 aa18.99■□□□□ 0.63
HDAC7-220ENST00000471235 IKBKGQ9Y6K9 419 aa18.99■□□□□ 0.63
HDAC7-220ENST00000471235 CCDC88CQ9P219 2028 aa18.99■□□□□ 0.63
HDAC7-220ENST00000471235 TEX51A0A1B0GUA7 166 aa18.98■□□□□ 0.63
HDAC7-220ENST00000471235 KLK10O43240 276 aa18.98■□□□□ 0.63
HDAC7-220ENST00000471235 RAD1O60671 282 aa18.98■□□□□ 0.63
HDAC7-220ENST00000471235 CCNDBP1O95273 360 aa18.98■□□□□ 0.63
HDAC7-220ENST00000471235 GUCA1CO95843 209 aa18.98■□□□□ 0.63
HDAC7-220ENST00000471235 ALDOAP04075 364 aaKnown RBP18.98■□□□□ 0.63
HDAC7-220ENST00000471235 ITPKBP27987 946 aa18.98■□□□□ 0.63
HDAC7-220ENST00000471235 GCAP28676 217 aa18.98■□□□□ 0.63
HDAC7-220ENST00000471235 ATP6V0D1P61421 351 aa18.98■□□□□ 0.63
HDAC7-220ENST00000471235 CDKL1Q00532 357 aa18.98■□□□□ 0.63
HDAC7-220ENST00000471235 SLC29A2Q14542 456 aa18.98■□□□□ 0.63
HDAC7-220ENST00000471235 ZXDCQ2QGD7 858 aaPredicted RBP18.98■□□□□ 0.63
HDAC7-220ENST00000471235 THEMIS2Q5TEJ8 643 aa18.98■□□□□ 0.63
HDAC7-220ENST00000471235 PRAMEF13Q5VWM6 474 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms