RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 CNDP1Q96KN2 507 aa6.47□□□□□ -1.37
VAMP3-202ENST00000470357 ZNF317Q96PQ6 595 aaPredicted RBP6.47□□□□□ -1.37
VAMP3-202ENST00000470357 ATOH8Q96SQ7 321 aa6.47□□□□□ -1.37
VAMP3-202ENST00000470357 PLCD4Q9BRC7 762 aa6.47□□□□□ -1.37
VAMP3-202ENST00000470357 SIKE1Q9BRV8 207 aa6.47□□□□□ -1.37
VAMP3-202ENST00000470357 SLC12A9Q9BXP2 914 aa6.47□□□□□ -1.37
VAMP3-202ENST00000470357 ERVK-6Q9BXR3 956 aa6.47□□□□□ -1.37
VAMP3-202ENST00000470357 PITPNM3Q9BZ71 974 aa6.47□□□□□ -1.37
VAMP3-202ENST00000470357 C6orf106Q9H6K1 298 aaPredicted RBP6.47□□□□□ -1.37
VAMP3-202ENST00000470357 COG4Q9H9E3 785 aa6.47□□□□□ -1.37
VAMP3-202ENST00000470357 PARVBQ9HBI1 364 aa6.47□□□□□ -1.37
VAMP3-202ENST00000470357 EML4Q9HC35 981 aaKnown RBP6.47□□□□□ -1.37
VAMP3-202ENST00000470357 MBNL1Q9NR56 388 aaKnown RBP6.47□□□□□ -1.37
VAMP3-202ENST00000470357 CD274Q9NZQ7 290 aa6.47□□□□□ -1.37
VAMP3-202ENST00000470357 CPSF2Q9P2I0 782 aaKnown RBP6.47□□□□□ -1.37
VAMP3-202ENST00000470357 ZNHIT2Q9UHR6 403 aa6.47□□□□□ -1.37
VAMP3-202ENST00000470357 PCOLCE2Q9UKZ9 415 aa6.47□□□□□ -1.37
VAMP3-202ENST00000470357 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.47□□□□□ -1.37
VAMP3-202ENST00000470357 OARD1Q9Y530 152 aa6.47□□□□□ -1.37
VAMP3-202ENST00000470357 OR1A2Q9Y585 309 aa6.47□□□□□ -1.37
VAMP3-202ENST00000470357 TP53BP1Q12888 1972 aaPredicted RBP6.47□□□□□ -1.37
VAMP3-202ENST00000470357 MAST4O15021 2626 aa6.46□□□□□ -1.37
VAMP3-202ENST00000470357 PRSS38A1L453 326 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 NPEPPSL1A6NEC2 478 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 POM121BA6NF01 834 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 ZNF839A8K0R7 811 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 A8MT66 165 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 MEI4A8MW99 385 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 SLCO1B7G3V0H7 640 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 GFYI3L273 518 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 CDC7O00311 574 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 IFRD1O00458 451 aaPredicted RBP6.46□□□□□ -1.38
VAMP3-202ENST00000470357 NDUFAB1O14561 156 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 FFAR2O15552 330 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 KLK8O60259 260 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 DLX3O60479 287 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 EDF1O60869 148 aaKnown RBP6.46□□□□□ -1.38
VAMP3-202ENST00000470357 TGDSO95455 350 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 MATN4O95460 622 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 HSPA4LO95757 839 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 MLYCDO95822 493 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 CAPNS1P04632 268 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 CEACAM5P06731 702 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 ANXA5P08758 320 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 SLC35G4P0C7Q5 338 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 FGF3P11487 239 aaPredicted RBP6.46□□□□□ -1.38
VAMP3-202ENST00000470357 IMPDH1P20839 514 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 BGNP21810 368 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 IDSP22304 550 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 DPP6P42658 865 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 CD97P48960 835 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 CLCNKAP51800 687 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 ABCE1P61221 599 aaKnown RBP6.46□□□□□ -1.38
VAMP3-202ENST00000470357 RPL6Q02878 288 aaKnown RBP6.46□□□□□ -1.38
VAMP3-202ENST00000470357 BST1Q10588 318 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 CDK5R2Q13319 367 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 RCN2Q14257 317 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 TERF2Q15554 542 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 TGFBIQ15582 683 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 OR4D1Q15615 310 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 WDR45BQ5MNZ6 344 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 XP32Q5T750 250 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 METRNLQ641Q3 311 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 ANKS6Q68DC2 871 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 SULT1C3Q6IMI6 304 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 TCEAL6Q6IPX3 200 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 DOK6Q6PKX4 331 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 CRTC3Q6UUV7 619 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 SBSNQ6UWP8 590 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 UBE2R2Q712K3 238 aaPredicted RBP6.46□□□□□ -1.38
VAMP3-202ENST00000470357 TRIM74Q86UV6 250 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 CRLF3Q8IUI8 442 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 ZNF547Q8IVP9 402 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 WDR75Q8IWA0 830 aaKnown RBP6.46□□□□□ -1.38
VAMP3-202ENST00000470357 CFAP206Q8IYR0 622 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 PELI3Q8N2H9 469 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 SPATA6LQ8N4H0 392 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 RAB42Q8N4Z0 105 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 ANKS4BQ8N8V4 417 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 MFSD2AQ8NA29 543 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 PDPRQ8NCN5 879 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 LKAAEAR1Q8TD35 194 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 BCAS4Q8TDM0 211 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 GAB3Q8WWW8 586 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 ASB11Q8WXH4 323 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 SNX19Q92543 992 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 TCEAL3Q969E4 200 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 BIRC7Q96CA5 298 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 FAR2Q96K12 515 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 ZC3H10Q96K80 434 aaKnown RBP6.46□□□□□ -1.38
VAMP3-202ENST00000470357 BMFQ96LC9 184 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 MAGEB10Q96LZ2 347 aaPredicted RBP6.46□□□□□ -1.38
VAMP3-202ENST00000470357 OR2M4Q96R27 311 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 CCT8L2Q96SF2 557 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 MECRQ9BV79 373 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 C1QTNF3Q9BXJ4 246 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 TRIM55Q9BYV6 548 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 TPSD1Q9BZJ3 242 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 DRC3Q9H069 523 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 ILKAPQ9H0C8 392 aaPredicted RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms