RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 CPAMD8Q8IZJ3 1885 aa18.07■□□□□ 0.48
NCKIPSD-209ENST00000470006 MAP1AP78559 2803 aaPredicted RBP18.07■□□□□ 0.48
NCKIPSD-209ENST00000470006 HACD1B0YJ81 288 aa18.07■□□□□ 0.48
NCKIPSD-209ENST00000470006 BHMG1C9JSJ3 638 aaPredicted RBP18.07■□□□□ 0.48
NCKIPSD-209ENST00000470006 QSOX1O00391 747 aa18.07■□□□□ 0.48
NCKIPSD-209ENST00000470006 SPOPO43791 374 aa18.07■□□□□ 0.48
NCKIPSD-209ENST00000470006 WISP2O76076 250 aa18.07■□□□□ 0.48
NCKIPSD-209ENST00000470006 HEXBP07686 556 aa18.07■□□□□ 0.48
NCKIPSD-209ENST00000470006 TMEM253P0C7T8 217 aa18.07■□□□□ 0.48
NCKIPSD-209ENST00000470006 ITGAMP11215 1152 aa18.07■□□□□ 0.48
NCKIPSD-209ENST00000470006 CD99P14209 185 aa18.07■□□□□ 0.48
NCKIPSD-209ENST00000470006 ADRA1AP35348 466 aa18.07■□□□□ 0.48
NCKIPSD-209ENST00000470006 PLOD1Q02809 727 aaPredicted RBP18.07■□□□□ 0.48
NCKIPSD-209ENST00000470006 DBN1Q16643 649 aa18.07■□□□□ 0.48
NCKIPSD-209ENST00000470006 ZNF766Q5HY98 468 aa18.07■□□□□ 0.48
NCKIPSD-209ENST00000470006 PRMT9Q6P2P2 845 aa18.07■□□□□ 0.48
NCKIPSD-209ENST00000470006 RIPOR1Q6ZS17 1223 aa18.07■□□□□ 0.48
NCKIPSD-209ENST00000470006 NCCRP1Q6ZVX7 275 aaPredicted RBP18.07■□□□□ 0.48
NCKIPSD-209ENST00000470006 NEK10Q6ZWH5 1172 aa18.07■□□□□ 0.48
NCKIPSD-209ENST00000470006 SPPL2CQ8IUH8 684 aa18.07■□□□□ 0.48
NCKIPSD-209ENST00000470006 LINC01555Q8NAE3 123 aa18.07■□□□□ 0.48
NCKIPSD-209ENST00000470006 CA5BP1Q8WTZ4 195 aa18.07■□□□□ 0.48
NCKIPSD-209ENST00000470006 IL17FQ96PD4 163 aa18.07■□□□□ 0.48
NCKIPSD-209ENST00000470006 BPIFA3Q9BQP9 254 aa18.07■□□□□ 0.48
NCKIPSD-209ENST00000470006 RNF32Q9H0A6 362 aa18.07■□□□□ 0.48
NCKIPSD-209ENST00000470006 TSPAN10Q9H1Z9 355 aaPredicted RBP18.07■□□□□ 0.48
NCKIPSD-209ENST00000470006 TEKT2Q9UIF3 430 aa18.07■□□□□ 0.48
NCKIPSD-209ENST00000470006 SLC39A10Q9ULF5 831 aa18.07■□□□□ 0.48
NCKIPSD-209ENST00000470006 IGHV1-45A0A0A0MS14 117 aa18.06■□□□□ 0.48
NCKIPSD-209ENST00000470006 TRBV5-4A0A0C4DH59 114 aa18.06■□□□□ 0.48
NCKIPSD-209ENST00000470006 A8MUI8 341 aa18.06■□□□□ 0.48
NCKIPSD-209ENST00000470006 IDSB3KWA1 339 aa18.06■□□□□ 0.48
NCKIPSD-209ENST00000470006 SRPX2O60687 465 aaPredicted RBP18.06■□□□□ 0.48
NCKIPSD-209ENST00000470006 S1PR4O95977 384 aa18.06■□□□□ 0.48
NCKIPSD-209ENST00000470006 ERVK-10P10266 1014 aa18.06■□□□□ 0.48
NCKIPSD-209ENST00000470006 CD9P21926 228 aa18.06■□□□□ 0.48
NCKIPSD-209ENST00000470006 PSMB4P28070 264 aa18.06■□□□□ 0.48
NCKIPSD-209ENST00000470006 RBL1P28749 1068 aa18.06■□□□□ 0.48
NCKIPSD-209ENST00000470006 AP2B1P63010 937 aa18.06■□□□□ 0.48
NCKIPSD-209ENST00000470006 CACNG1Q06432 222 aa18.06■□□□□ 0.48
NCKIPSD-209ENST00000470006 SPARCL1Q14515 664 aa18.06■□□□□ 0.48
NCKIPSD-209ENST00000470006 SLC18A3Q16572 532 aa18.06■□□□□ 0.48
NCKIPSD-209ENST00000470006 CCDC181Q5TID7 509 aa18.06■□□□□ 0.48
NCKIPSD-209ENST00000470006 PIANPQ8IYJ0 282 aa18.06■□□□□ 0.48
NCKIPSD-209ENST00000470006 MMP21Q8N119 569 aa18.06■□□□□ 0.48
NCKIPSD-209ENST00000470006 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.06■□□□□ 0.48
NCKIPSD-209ENST00000470006 LRRC45Q96CN5 670 aa18.06■□□□□ 0.48
NCKIPSD-209ENST00000470006 ALS2CR12Q96Q35 445 aa18.06■□□□□ 0.48
NCKIPSD-209ENST00000470006 TBL1YQ9BQ87 522 aa18.06■□□□□ 0.48
NCKIPSD-209ENST00000470006 GORASP1Q9BQQ3 440 aa18.06■□□□□ 0.48
NCKIPSD-209ENST00000470006 TRPC4Q9UBN4 977 aa18.06■□□□□ 0.48
NCKIPSD-209ENST00000470006 PCDHGB6Q9Y5F9 930 aa18.06■□□□□ 0.48
NCKIPSD-209ENST00000470006 GTF3C1Q12789 2109 aa18.05■□□□□ 0.48
NCKIPSD-209ENST00000470006 A0A0J9YVX5 310 aa18.05■□□□□ 0.48
NCKIPSD-209ENST00000470006 SLC5A10A0PJK1 596 aa18.05■□□□□ 0.48
NCKIPSD-209ENST00000470006 FITM1A5D6W6 292 aa18.05■□□□□ 0.48
NCKIPSD-209ENST00000470006 FFAR3O14843 346 aa18.05■□□□□ 0.48
NCKIPSD-209ENST00000470006 GPR42O15529 346 aa18.05■□□□□ 0.48
NCKIPSD-209ENST00000470006 TTI1O43156 1089 aa18.05■□□□□ 0.48
NCKIPSD-209ENST00000470006 MED26O95402 600 aa18.05■□□□□ 0.48
NCKIPSD-209ENST00000470006 RPN2P04844 631 aa18.05■□□□□ 0.48
NCKIPSD-209ENST00000470006 OR56A5P0C7T3 313 aa18.05■□□□□ 0.48
NCKIPSD-209ENST00000470006 ICAM2P13598 275 aa18.05■□□□□ 0.48
NCKIPSD-209ENST00000470006 ABOP16442 354 aa18.05■□□□□ 0.48
NCKIPSD-209ENST00000470006 SLC1A1P43005 524 aa18.05■□□□□ 0.48
NCKIPSD-209ENST00000470006 ALDH6A1Q02252 535 aaKnown RBP18.05■□□□□ 0.48
NCKIPSD-209ENST00000470006 KRTCAP3Q53RY4 240 aa18.05■□□□□ 0.48
NCKIPSD-209ENST00000470006 FRMPD2BQ6IN97 320 aa18.05■□□□□ 0.48
NCKIPSD-209ENST00000470006 ZUFSPQ96AP4 578 aa18.05■□□□□ 0.48
NCKIPSD-209ENST00000470006 GPR137Q96N19 417 aa18.05■□□□□ 0.48
NCKIPSD-209ENST00000470006 ABCA2Q9BZC7 2435 aa18.04■□□□□ 0.48
NCKIPSD-209ENST00000470006 NPIPA5E9PKD4 350 aa18.04■□□□□ 0.48
NCKIPSD-209ENST00000470006 CTSVO60911 334 aa18.04■□□□□ 0.48
NCKIPSD-209ENST00000470006 HOXB4P17483 251 aaPredicted RBP18.04■□□□□ 0.48
NCKIPSD-209ENST00000470006 COMTP21964 271 aa18.04■□□□□ 0.48
NCKIPSD-209ENST00000470006 MUM1Q2TAK8 710 aa18.04■□□□□ 0.48
NCKIPSD-209ENST00000470006 DNAJC21Q5F1R6 531 aaKnown RBP18.04■□□□□ 0.48
NCKIPSD-209ENST00000470006 SDCCAG3Q96C92 435 aa18.04■□□□□ 0.48
NCKIPSD-209ENST00000470006 CABS1Q96KC9 395 aa18.04■□□□□ 0.48
NCKIPSD-209ENST00000470006 ZNF285Q96NJ3 590 aa18.04■□□□□ 0.48
NCKIPSD-209ENST00000470006 C19orf43Q9BQ61 176 aa18.04■□□□□ 0.48
NCKIPSD-209ENST00000470006 ENKD1Q9H0I2 346 aa18.04■□□□□ 0.48
NCKIPSD-209ENST00000470006 KLHL1Q9NR64 748 aa18.04■□□□□ 0.48
NCKIPSD-209ENST00000470006 NPIPA1Q9UND3 350 aa18.04■□□□□ 0.48
NCKIPSD-209ENST00000470006 ZNF835Q9Y2P0 537 aa18.04■□□□□ 0.48
NCKIPSD-209ENST00000470006 LOC105369274A0A096LPK9 316 aa18.03■□□□□ 0.48
NCKIPSD-209ENST00000470006 LOC102723532A0A0G2JNH3 316 aa18.03■□□□□ 0.48
NCKIPSD-209ENST00000470006 AKR1B10O60218 316 aa18.03■□□□□ 0.48
NCKIPSD-209ENST00000470006 STK10O94804 968 aaKnown RBP18.03■□□□□ 0.48
NCKIPSD-209ENST00000470006 TPH1P17752 444 aa18.03■□□□□ 0.48
NCKIPSD-209ENST00000470006 HSPA14Q0VDF9 509 aa18.03■□□□□ 0.48
NCKIPSD-209ENST00000470006 MSLNQ13421 630 aaPredicted RBP18.03■□□□□ 0.48
NCKIPSD-209ENST00000470006 TAZQ16635 292 aa18.03■□□□□ 0.48
NCKIPSD-209ENST00000470006 ANKRD20A2Q5SQ80 823 aa18.03■□□□□ 0.48
NCKIPSD-209ENST00000470006 ANKRD20A1Q5TYW2 823 aa18.03■□□□□ 0.48
NCKIPSD-209ENST00000470006 ANKRD20A3Q5VUR7 823 aa18.03■□□□□ 0.48
NCKIPSD-209ENST00000470006 C3P1Q6ZMU1 363 aa18.03■□□□□ 0.48
NCKIPSD-209ENST00000470006 RHOT2Q8IXI1 618 aa18.03■□□□□ 0.48
NCKIPSD-209ENST00000470006 OR4N4Q8N0Y3 316 aa18.03■□□□□ 0.48
NCKIPSD-209ENST00000470006 OR2L8Q8NGY9 312 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms