RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 FITM1A5D6W6 292 aa12.71□□□□□ -0.37
CPSF4-210ENST00000469897 AP3B1O00203 1094 aa12.71□□□□□ -0.37
CPSF4-210ENST00000469897 SOCS6O14544 535 aa12.71□□□□□ -0.37
CPSF4-210ENST00000469897 NRP2O60462 931 aa12.71□□□□□ -0.37
CPSF4-210ENST00000469897 FGGP02679 453 aa12.71□□□□□ -0.37
CPSF4-210ENST00000469897 CHRM3P20309 590 aa12.71□□□□□ -0.37
CPSF4-210ENST00000469897 RPS3P23396 243 aaKnown RBP eCLIP12.71□□□□□ -0.37
CPSF4-210ENST00000469897 ARNTP27540 789 aa12.71□□□□□ -0.37
CPSF4-210ENST00000469897 AIMP2Q13155 320 aaKnown RBP12.71□□□□□ -0.37
CPSF4-210ENST00000469897 TRIP13Q15645 432 aaPredicted RBP12.71□□□□□ -0.37
CPSF4-210ENST00000469897 HIF1AQ16665 826 aa12.71□□□□□ -0.37
CPSF4-210ENST00000469897 CRB2Q5IJ48 1285 aa12.71□□□□□ -0.37
CPSF4-210ENST00000469897 PRAMEF13Q5VWM6 474 aa12.71□□□□□ -0.37
CPSF4-210ENST00000469897 FBXO42Q6P3S6 717 aa12.71□□□□□ -0.37
CPSF4-210ENST00000469897 LRRC8BQ6P9F7 803 aa12.71□□□□□ -0.37
CPSF4-210ENST00000469897 DRICH1Q6PGQ1 229 aaPredicted RBP12.71□□□□□ -0.37
CPSF4-210ENST00000469897 KIRREL2Q6UWL6 708 aa12.71□□□□□ -0.37
CPSF4-210ENST00000469897 C4orf22Q6V702 233 aa12.71□□□□□ -0.37
CPSF4-210ENST00000469897 Q6ZS92 163 aa12.71□□□□□ -0.37
CPSF4-210ENST00000469897 LRRC6Q86X45 466 aa12.71□□□□□ -0.37
CPSF4-210ENST00000469897 OR4N4Q8N0Y3 316 aa12.71□□□□□ -0.37
CPSF4-210ENST00000469897 RAB42Q8N4Z0 105 aa12.71□□□□□ -0.37
CPSF4-210ENST00000469897 TTC29Q8NA56 475 aaPredicted RBP12.71□□□□□ -0.37
CPSF4-210ENST00000469897 OR2L3Q8NG85 312 aa12.71□□□□□ -0.37
CPSF4-210ENST00000469897 TM9SF4Q92544 642 aa12.71□□□□□ -0.37
CPSF4-210ENST00000469897 FKBP10Q96AY3 582 aa12.71□□□□□ -0.37
CPSF4-210ENST00000469897 FOPNLQ96NB1 174 aa12.71□□□□□ -0.37
CPSF4-210ENST00000469897 ZNF285Q96NJ3 590 aa12.71□□□□□ -0.37
CPSF4-210ENST00000469897 SPSB2Q99619 263 aa12.71□□□□□ -0.37
CPSF4-210ENST00000469897 KIFC1Q9BW19 673 aa12.71□□□□□ -0.37
CPSF4-210ENST00000469897 ACAT2Q9BWD1 397 aa12.71□□□□□ -0.37
CPSF4-210ENST00000469897 SLC26A1Q9H2B4 701 aa12.71□□□□□ -0.37
CPSF4-210ENST00000469897 SLC6A20Q9NP91 592 aa12.71□□□□□ -0.37
CPSF4-210ENST00000469897 CUEDC1Q9NWM3 386 aaPredicted RBP12.71□□□□□ -0.37
CPSF4-210ENST00000469897 SYBUQ9NX95 663 aa12.71□□□□□ -0.37
CPSF4-210ENST00000469897 CRYL1Q9Y2S2 319 aa12.71□□□□□ -0.37
CPSF4-210ENST00000469897 HS3ST3B1Q9Y662 390 aa12.71□□□□□ -0.37
CPSF4-210ENST00000469897 A0A1W2PPV9 198 aa12.7□□□□□ -0.38
CPSF4-210ENST00000469897 NIPSNAP2O75323 286 aa12.7□□□□□ -0.38
CPSF4-210ENST00000469897 AVILO75366 819 aa12.7□□□□□ -0.38
CPSF4-210ENST00000469897 MED26O95402 600 aa12.7□□□□□ -0.38
CPSF4-210ENST00000469897 CXCR5P32302 372 aa12.7□□□□□ -0.38
CPSF4-210ENST00000469897 CCNFP41002 786 aa12.7□□□□□ -0.38
CPSF4-210ENST00000469897 YOD1Q5VVQ6 348 aaPredicted RBP12.7□□□□□ -0.38
CPSF4-210ENST00000469897 MRNIPQ6NTE8 343 aa12.7□□□□□ -0.38
CPSF4-210ENST00000469897 CUZD1Q86UP6 607 aa12.7□□□□□ -0.38
CPSF4-210ENST00000469897 MPP5Q8N3R9 675 aa12.7□□□□□ -0.38
CPSF4-210ENST00000469897 DNAJB14Q8TBM8 379 aa12.7□□□□□ -0.38
CPSF4-210ENST00000469897 MAGEC3Q8TD91 643 aa12.7□□□□□ -0.38
CPSF4-210ENST00000469897 MESP1Q9BRJ9 268 aa12.7□□□□□ -0.38
CPSF4-210ENST00000469897 RAB11FIP5Q9BXF6 653 aa12.7□□□□□ -0.38
CPSF4-210ENST00000469897 WDR54Q9H977 334 aa12.7□□□□□ -0.38
CPSF4-210ENST00000469897 ZNF304Q9HCX3 659 aa12.7□□□□□ -0.38
CPSF4-210ENST00000469897 IL1RAPL1Q9NZN1 696 aa12.7□□□□□ -0.38
CPSF4-210ENST00000469897 CTSFQ9UBX1 484 aa12.7□□□□□ -0.38
CPSF4-210ENST00000469897 NTNG1Q9Y2I2 539 aa12.7□□□□□ -0.38
CPSF4-210ENST00000469897 CSAG2Q9Y5P2 127 aa12.7□□□□□ -0.38
CPSF4-210ENST00000469897 MRFAP1Q9Y605 127 aa12.7□□□□□ -0.38
CPSF4-210ENST00000469897 VSTM2BA6NLU5 285 aa12.69□□□□□ -0.38
CPSF4-210ENST00000469897 CEP104O60308 925 aa12.69□□□□□ -0.38
CPSF4-210ENST00000469897 FKBP9O95302 570 aa12.69□□□□□ -0.38
CPSF4-210ENST00000469897 MATN4O95460 622 aa12.69□□□□□ -0.38
CPSF4-210ENST00000469897 RBBP7Q16576 425 aa12.69□□□□□ -0.38
CPSF4-210ENST00000469897 ACSBG2Q5FVE4 666 aa12.69□□□□□ -0.38
CPSF4-210ENST00000469897 AGAP7PQ5VUJ5 663 aa12.69□□□□□ -0.38
CPSF4-210ENST00000469897 SUSD1Q6UWL2 747 aa12.69□□□□□ -0.38
CPSF4-210ENST00000469897 SPNS2Q8IVW8 549 aa12.69□□□□□ -0.38
CPSF4-210ENST00000469897 PRSS58Q8IYP2 241 aa12.69□□□□□ -0.38
CPSF4-210ENST00000469897 OR11G2Q8NGC1 345 aa12.69□□□□□ -0.38
CPSF4-210ENST00000469897 OR9A1PQ8NGU1 263 aa12.69□□□□□ -0.38
CPSF4-210ENST00000469897 HMGCLL1Q8TB92 370 aa12.69□□□□□ -0.38
CPSF4-210ENST00000469897 MAIP1Q8WWC4 291 aa12.69□□□□□ -0.38
CPSF4-210ENST00000469897 LPGAT1Q92604 370 aa12.69□□□□□ -0.38
CPSF4-210ENST00000469897 THOC3Q96J01 351 aaKnown RBP12.69□□□□□ -0.38
CPSF4-210ENST00000469897 AGAP4Q96P64 663 aa12.69□□□□□ -0.38
CPSF4-210ENST00000469897 DPH7Q9BTV6 452 aa12.69□□□□□ -0.38
CPSF4-210ENST00000469897 ENAMQ9NRM1 1142 aa12.69□□□□□ -0.38
CPSF4-210ENST00000469897 ERRFI1Q9UJM3 462 aaPredicted RBP12.69□□□□□ -0.38
CPSF4-210ENST00000469897 ZKSCAN5Q9Y2L8 839 aa12.69□□□□□ -0.38
CPSF4-210ENST00000469897 KLK4Q9Y5K2 254 aa12.69□□□□□ -0.38
CPSF4-210ENST00000469897 ANKUB1A6NFN9 424 aa12.68□□□□□ -0.38
CPSF4-210ENST00000469897 GOLGA6L6A8MZA4 724 aa12.68□□□□□ -0.38
CPSF4-210ENST00000469897 PFDN6O15212 129 aa12.68□□□□□ -0.38
CPSF4-210ENST00000469897 DDAH2O95865 285 aa12.68□□□□□ -0.38
CPSF4-210ENST00000469897 COL8A1P27658 744 aa12.68□□□□□ -0.38
CPSF4-210ENST00000469897 CMPK1P30085 196 aa12.68□□□□□ -0.38
CPSF4-210ENST00000469897 VPS41P49754 854 aa12.68□□□□□ -0.38
CPSF4-210ENST00000469897 CDK16Q00536 496 aa12.68□□□□□ -0.38
CPSF4-210ENST00000469897 OCA2Q04671 838 aa12.68□□□□□ -0.38
CPSF4-210ENST00000469897 KLC1Q07866 573 aa12.68□□□□□ -0.38
CPSF4-210ENST00000469897 Q0VFX4 171 aa12.68□□□□□ -0.38
CPSF4-210ENST00000469897 TSTA3Q13630 321 aaPredicted RBP12.68□□□□□ -0.38
CPSF4-210ENST00000469897 KLHL38Q2WGJ6 581 aa12.68□□□□□ -0.38
CPSF4-210ENST00000469897 TUBB8Q3ZCM7 444 aa12.68□□□□□ -0.38
CPSF4-210ENST00000469897 ANKRD20A4Q4UJ75 823 aa12.68□□□□□ -0.38
CPSF4-210ENST00000469897 VWA2Q5GFL6 755 aa12.68□□□□□ -0.38
CPSF4-210ENST00000469897 IRAK1BP1Q5VVH5 260 aa12.68□□□□□ -0.38
CPSF4-210ENST00000469897 LINC00696Q6ZRV3 163 aa12.68□□□□□ -0.38
CPSF4-210ENST00000469897 LAPTM4BQ86VI4 370 aa12.68□□□□□ -0.38
CPSF4-210ENST00000469897 PRELID2Q8N945 189 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms