RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 NEIL2Q969S2 332 aa18.37■□□□□ 0.53
SMC4-209ENST00000468653 RCN3Q96D15 328 aa18.37■□□□□ 0.53
SMC4-209ENST00000468653 FRG2BQ96QU4 278 aa18.37■□□□□ 0.53
SMC4-209ENST00000468653 CHRDQ9H2X0 955 aa18.37■□□□□ 0.53
SMC4-209ENST00000468653 PRDM8Q9NQV8 689 aa18.37■□□□□ 0.53
SMC4-209ENST00000468653 THEGQ9P2T0 379 aa18.37■□□□□ 0.53
SMC4-209ENST00000468653 GPR45Q9Y5Y3 372 aa18.37■□□□□ 0.53
SMC4-209ENST00000468653 ZNF839A8K0R7 811 aa18.37■□□□□ 0.53
SMC4-209ENST00000468653 NDUFS2O75306 463 aa18.37■□□□□ 0.53
SMC4-209ENST00000468653 RASGRP1O95267 797 aa18.37■□□□□ 0.53
SMC4-209ENST00000468653 CD22P20273 847 aa18.37■□□□□ 0.53
SMC4-209ENST00000468653 NUDT2P50583 147 aa18.37■□□□□ 0.53
SMC4-209ENST00000468653 STX5Q13190 355 aa18.37■□□□□ 0.53
SMC4-209ENST00000468653 CLCA4Q14CN2 919 aa18.37■□□□□ 0.53
SMC4-209ENST00000468653 GRHL2Q6ISB3 625 aa18.37■□□□□ 0.53
SMC4-209ENST00000468653 TMPRSS11BQ86T26 416 aa18.37■□□□□ 0.53
SMC4-209ENST00000468653 RAB42Q8N4Z0 105 aa18.37■□□□□ 0.53
SMC4-209ENST00000468653 C2orf73Q8N5S3 287 aaPredicted RBP18.37■□□□□ 0.53
SMC4-209ENST00000468653 KYQ8NBH2 561 aa18.37■□□□□ 0.53
SMC4-209ENST00000468653 SETD7Q8WTS6 366 aaKnown RBP18.37■□□□□ 0.53
SMC4-209ENST00000468653 THTPAQ9BU02 230 aa18.37■□□□□ 0.53
SMC4-209ENST00000468653 EFCAB1Q9HAE3 211 aa18.37■□□□□ 0.53
SMC4-209ENST00000468653 LRTM1Q9HBL6 345 aa18.37■□□□□ 0.53
SMC4-209ENST00000468653 SPATA7Q9P0W8 599 aa18.37■□□□□ 0.53
SMC4-209ENST00000468653 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.37■□□□□ 0.53
SMC4-209ENST00000468653 RASSF9O75901 435 aa18.36■□□□□ 0.53
SMC4-209ENST00000468653 ITGAXP20702 1163 aa18.36■□□□□ 0.53
SMC4-209ENST00000468653 CTBSQ01459 385 aa18.36■□□□□ 0.53
SMC4-209ENST00000468653 MAD2L1Q13257 205 aaPredicted RBP18.36■□□□□ 0.53
SMC4-209ENST00000468653 ART3Q13508 389 aa18.36■□□□□ 0.53
SMC4-209ENST00000468653 LRP8Q14114 963 aa18.36■□□□□ 0.53
SMC4-209ENST00000468653 TCEA2Q15560 299 aa18.36■□□□□ 0.53
SMC4-209ENST00000468653 ALG11Q2TAA5 492 aa18.36■□□□□ 0.53
SMC4-209ENST00000468653 MMEL1Q495T6 779 aa18.36■□□□□ 0.53
SMC4-209ENST00000468653 SLCO4C1Q6ZQN7 724 aa18.36■□□□□ 0.53
SMC4-209ENST00000468653 HID1Q8IV36 788 aa18.36■□□□□ 0.53
SMC4-209ENST00000468653 CLDN23Q96B33 292 aa18.36■□□□□ 0.53
SMC4-209ENST00000468653 SLC25A23Q9BV35 468 aa18.36■□□□□ 0.53
SMC4-209ENST00000468653 MRPL1Q9BYD6 325 aaKnown RBP18.36■□□□□ 0.53
SMC4-209ENST00000468653 ACPTQ9BZG2 426 aa18.36■□□□□ 0.53
SMC4-209ENST00000468653 MMADHCQ9H3L0 296 aaPredicted RBP18.36■□□□□ 0.53
SMC4-209ENST00000468653 PRM3Q9NNZ6 103 aa18.36■□□□□ 0.53
SMC4-209ENST00000468653 NOP53Q9NZM5 478 aaKnown RBP18.36■□□□□ 0.53
SMC4-209ENST00000468653 A0A1W2PPC4 97 aa18.35■□□□□ 0.53
SMC4-209ENST00000468653 SEC22BO75396 215 aa18.35■□□□□ 0.53
SMC4-209ENST00000468653 ERGP11308 486 aa18.35■□□□□ 0.53
SMC4-209ENST00000468653 CASP2P42575 452 aa18.35■□□□□ 0.53
SMC4-209ENST00000468653 RPL38P63173 70 aaKnown RBP18.35■□□□□ 0.53
SMC4-209ENST00000468653 GRIK2Q13002 908 aa18.35■□□□□ 0.53
SMC4-209ENST00000468653 CYP2A13Q16696 494 aa18.35■□□□□ 0.53
SMC4-209ENST00000468653 SMU1Q2TAY7 513 aa18.35■□□□□ 0.53
SMC4-209ENST00000468653 RFTN2Q52LD8 501 aaPredicted RBP18.35■□□□□ 0.53
SMC4-209ENST00000468653 PDCD4Q53EL6 469 aaKnown RBP18.35■□□□□ 0.53
SMC4-209ENST00000468653 PRAMEF14Q5SWL7 426 aa18.35■□□□□ 0.53
SMC4-209ENST00000468653 IL23RQ5VWK5 629 aa18.35■□□□□ 0.53
SMC4-209ENST00000468653 PRAMEF13Q5VWM6 474 aa18.35■□□□□ 0.53
SMC4-209ENST00000468653 CYB5D1Q6P9G0 228 aa18.35■□□□□ 0.53
SMC4-209ENST00000468653 GJD3Q8N144 294 aa18.35■□□□□ 0.53
SMC4-209ENST00000468653 SH3KBP1Q96B97 665 aa18.35■□□□□ 0.53
SMC4-209ENST00000468653 CAMK1GQ96NX5 476 aa18.35■□□□□ 0.53
SMC4-209ENST00000468653 HAUS8Q9BT25 410 aa18.35■□□□□ 0.53
SMC4-209ENST00000468653 BRINP2Q9C0B6 783 aa18.35■□□□□ 0.53
SMC4-209ENST00000468653 MVB12BQ9H7P6 319 aa18.35■□□□□ 0.53
SMC4-209ENST00000468653 C1orf109Q9NX04 203 aa18.35■□□□□ 0.53
SMC4-209ENST00000468653 EIF3LQ9Y262 564 aaKnown RBP18.35■□□□□ 0.53
SMC4-209ENST00000468653 PCDHGA11Q9Y5H2 935 aa18.35■□□□□ 0.53
SMC4-209ENST00000468653 HEBP2Q9Y5Z4 205 aa18.35■□□□□ 0.53
SMC4-209ENST00000468653 OR52A4PA6NMU1 304 aa18.35■□□□□ 0.53
SMC4-209ENST00000468653 NR5A2O00482 541 aa18.35■□□□□ 0.53
SMC4-209ENST00000468653 VARSP26640 1264 aaKnown RBP18.35■□□□□ 0.53
SMC4-209ENST00000468653 AK4P27144 223 aaPredicted RBP18.35■□□□□ 0.53
SMC4-209ENST00000468653 MRPL19P49406 292 aaKnown RBP18.35■□□□□ 0.53
SMC4-209ENST00000468653 ZNF33BQ06732 778 aa18.35■□□□□ 0.53
SMC4-209ENST00000468653 MTAPQ13126 283 aa18.35■□□□□ 0.53
SMC4-209ENST00000468653 RPE65Q16518 533 aa18.35■□□□□ 0.53
SMC4-209ENST00000468653 CATSPEREQ5SY80 951 aa18.35■□□□□ 0.53
SMC4-209ENST00000468653 FBXW10Q5XX13 1052 aa18.35■□□□□ 0.53
SMC4-209ENST00000468653 C16orf89Q6UX73 402 aa18.35■□□□□ 0.53
SMC4-209ENST00000468653 FUNDC1Q8IVP5 155 aa18.35■□□□□ 0.53
SMC4-209ENST00000468653 DEFB107AQ8IZN7 70 aa18.35■□□□□ 0.53
SMC4-209ENST00000468653 SLC5A11Q8WWX8 675 aa18.35■□□□□ 0.53
SMC4-209ENST00000468653 NPAS2Q99743 824 aa18.35■□□□□ 0.53
SMC4-209ENST00000468653 TMEM168Q9H0V1 697 aa18.35■□□□□ 0.53
SMC4-209ENST00000468653 TBC1D29Q9UFV1 150 aa18.35■□□□□ 0.53
SMC4-209ENST00000468653 INVSQ9Y283 1065 aa18.35■□□□□ 0.53
SMC4-209ENST00000468653 SIT1Q9Y3P8 196 aa18.35■□□□□ 0.53
SMC4-209ENST00000468653 POLR3HQ9Y535 204 aaPredicted RBP18.35■□□□□ 0.53
SMC4-209ENST00000468653 SERTM1A2A2V5 107 aa18.34■□□□□ 0.53
SMC4-209ENST00000468653 H0YIV9 168 aa18.34■□□□□ 0.53
SMC4-209ENST00000468653 SLC22A3O75751 556 aa18.34■□□□□ 0.53
SMC4-209ENST00000468653 TNFP01375 233 aa18.34■□□□□ 0.53
SMC4-209ENST00000468653 C1GALT1C1LP0DN25 315 aa18.34■□□□□ 0.53
SMC4-209ENST00000468653 ACTR1BP42025 376 aa18.34■□□□□ 0.53
SMC4-209ENST00000468653 RPS9P46781 194 aaKnown RBP18.34■□□□□ 0.53
SMC4-209ENST00000468653 ACTR1AP61163 376 aa18.34■□□□□ 0.53
SMC4-209ENST00000468653 PAGE2BQ5JRK9 111 aa18.34■□□□□ 0.53
SMC4-209ENST00000468653 SLC30A9Q6PML9 568 aa18.34■□□□□ 0.53
SMC4-209ENST00000468653 LCTLQ6UWM7 567 aa18.34■□□□□ 0.53
SMC4-209ENST00000468653 ZFAND4Q86XD8 727 aa18.34■□□□□ 0.53
SMC4-209ENST00000468653 SCUBE1Q8IWY4 988 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms