RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 GSDMBQ8TAX9 411 aa23.44■■□□□ 1.34
PTCH1-210ENST00000468211 SELENOSQ9BQE4 189 aa23.44■■□□□ 1.34
PTCH1-210ENST00000468211 MESP1Q9BRJ9 268 aa23.44■■□□□ 1.34
PTCH1-210ENST00000468211 TRIM56Q9BRZ2 755 aaKnown RBP23.44■■□□□ 1.34
PTCH1-210ENST00000468211 RAB11FIP5Q9BXF6 653 aa23.44■■□□□ 1.34
PTCH1-210ENST00000468211 MRM3Q9HC36 420 aaKnown RBP23.44■■□□□ 1.34
PTCH1-210ENST00000468211 SLC6A20Q9NP91 592 aa23.44■■□□□ 1.34
PTCH1-210ENST00000468211 ATP13A2Q9NQ11 1180 aa23.44■■□□□ 1.34
PTCH1-210ENST00000468211 ASF1BQ9NVP2 202 aa23.44■■□□□ 1.34
PTCH1-210ENST00000468211 CTSFQ9UBX1 484 aa23.44■■□□□ 1.34
PTCH1-210ENST00000468211 FBXL4Q9UKA2 621 aa23.44■■□□□ 1.34
PTCH1-210ENST00000468211 B3GNT3Q9Y2A9 372 aa23.44■■□□□ 1.34
PTCH1-210ENST00000468211 ZKSCAN5Q9Y2L8 839 aa23.44■■□□□ 1.34
PTCH1-210ENST00000468211 CNTRLQ7Z7A1 2325 aa23.43■■□□□ 1.34
PTCH1-210ENST00000468211 LOC105369274A0A096LPK9 316 aa23.43■■□□□ 1.34
PTCH1-210ENST00000468211 LOC102723532A0A0G2JNH3 316 aa23.43■■□□□ 1.34
PTCH1-210ENST00000468211 FITM1A5D6W6 292 aa23.43■■□□□ 1.34
PTCH1-210ENST00000468211 SOCS6O14544 535 aa23.43■■□□□ 1.34
PTCH1-210ENST00000468211 KPNA5O15131 536 aa23.43■■□□□ 1.34
PTCH1-210ENST00000468211 AVILO75366 819 aa23.43■■□□□ 1.34
PTCH1-210ENST00000468211 IGHEP01854 428 aa23.43■■□□□ 1.34
PTCH1-210ENST00000468211 MMP11P24347 488 aa23.43■■□□□ 1.34
PTCH1-210ENST00000468211 CXCR5P32302 372 aa23.43■■□□□ 1.34
PTCH1-210ENST00000468211 GBX1Q14549 363 aa23.43■■□□□ 1.34
PTCH1-210ENST00000468211 GRM7Q14831 915 aa23.43■■□□□ 1.34
PTCH1-210ENST00000468211 TRIP13Q15645 432 aaPredicted RBP23.43■■□□□ 1.34
PTCH1-210ENST00000468211 TYSND1Q2T9J0 566 aa23.43■■□□□ 1.34
PTCH1-210ENST00000468211 WASHC2DQ5SRD0 308 aa23.43■■□□□ 1.34
PTCH1-210ENST00000468211 C4orf22Q6V702 233 aa23.43■■□□□ 1.34
PTCH1-210ENST00000468211 OR4N4Q8N0Y3 316 aa23.43■■□□□ 1.34
PTCH1-210ENST00000468211 OR2L3Q8NG85 312 aa23.43■■□□□ 1.34
PTCH1-210ENST00000468211 HMGCLL1Q8TB92 370 aa23.43■■□□□ 1.34
PTCH1-210ENST00000468211 ZUFSPQ96AP4 578 aa23.43■■□□□ 1.34
PTCH1-210ENST00000468211 SLC26A1Q9H2B4 701 aa23.43■■□□□ 1.34
PTCH1-210ENST00000468211 SOX17Q9H6I2 414 aaPredicted RBP23.43■■□□□ 1.34
PTCH1-210ENST00000468211 WDR54Q9H977 334 aa23.43■■□□□ 1.34
PTCH1-210ENST00000468211 STOX2Q9P2F5 926 aaPredicted RBP23.43■■□□□ 1.34
PTCH1-210ENST00000468211 SOX13Q9UN79 622 aa23.43■■□□□ 1.34
PTCH1-210ENST00000468211 CRYL1Q9Y2S2 319 aa23.43■■□□□ 1.34
PTCH1-210ENST00000468211 TARM1B6A8C7 271 aa23.42■■□□□ 1.34
PTCH1-210ENST00000468211 ALBP02768 609 aa23.42■■□□□ 1.34
PTCH1-210ENST00000468211 F7P08709 466 aaPredicted RBP23.42■■□□□ 1.34
PTCH1-210ENST00000468211 TPSB2P20231 275 aa23.42■■□□□ 1.34
PTCH1-210ENST00000468211 TPSAB1Q15661 275 aa23.42■■□□□ 1.34
PTCH1-210ENST00000468211 CRB2Q5IJ48 1285 aa23.42■■□□□ 1.34
PTCH1-210ENST00000468211 TCTE1Q5JU00 501 aa23.42■■□□□ 1.34
PTCH1-210ENST00000468211 KIRREL2Q6UWL6 708 aa23.42■■□□□ 1.34
PTCH1-210ENST00000468211 IQCKQ8N0W5 287 aa23.42■■□□□ 1.34
PTCH1-210ENST00000468211 PRELID2Q8N945 189 aa23.42■■□□□ 1.34
PTCH1-210ENST00000468211 SSC4DQ8WTU2 575 aa23.42■■□□□ 1.34
PTCH1-210ENST00000468211 IL1RAPL1Q9NZN1 696 aa23.42■■□□□ 1.34
PTCH1-210ENST00000468211 CDC23Q9UJX2 597 aa23.42■■□□□ 1.34
PTCH1-210ENST00000468211 KLK4Q9Y5K2 254 aa23.42■■□□□ 1.34
PTCH1-210ENST00000468211 CSAG2Q9Y5P2 127 aa23.42■■□□□ 1.34
PTCH1-210ENST00000468211 HS3ST3B1Q9Y662 390 aa23.42■■□□□ 1.34
PTCH1-210ENST00000468211 MAU2Q9Y6X3 613 aa23.42■■□□□ 1.34
PTCH1-210ENST00000468211 TEX15Q9BXT5 2789 aa23.41■■□□□ 1.34
PTCH1-210ENST00000468211 A0A0J9YVX5 310 aa23.41■■□□□ 1.34
PTCH1-210ENST00000468211 GOLGA6L6A8MZA4 724 aa23.41■■□□□ 1.34
PTCH1-210ENST00000468211 CEP104O60308 925 aa23.41■■□□□ 1.34
PTCH1-210ENST00000468211 FKBP9O95302 570 aa23.41■■□□□ 1.34
PTCH1-210ENST00000468211 MATN4O95460 622 aa23.41■■□□□ 1.34
PTCH1-210ENST00000468211 ALPPP05187 535 aa23.41■■□□□ 1.34
PTCH1-210ENST00000468211 EEF1AKMT2Q5JPI9 291 aaKnown RBP23.41■■□□□ 1.34
PTCH1-210ENST00000468211 YOD1Q5VVQ6 348 aaPredicted RBP23.41■■□□□ 1.34
PTCH1-210ENST00000468211 ZNF662Q6ZS27 426 aa23.41■■□□□ 1.34
PTCH1-210ENST00000468211 TTC29Q8NA56 475 aaPredicted RBP23.41■■□□□ 1.34
PTCH1-210ENST00000468211 SYNPO2LQ9H987 977 aa23.41■■□□□ 1.34
PTCH1-210ENST00000468211 PLEKHB1Q9UF11 243 aaPredicted RBP23.41■■□□□ 1.34
PTCH1-210ENST00000468211 NTNG1Q9Y2I2 539 aa23.41■■□□□ 1.34
PTCH1-210ENST00000468211 AP3B1O00203 1094 aa23.4■■□□□ 1.34
PTCH1-210ENST00000468211 PIM1P11309 404 aaPredicted RBP23.4■■□□□ 1.34
PTCH1-210ENST00000468211 ITGA3P26006 1051 aa23.4■■□□□ 1.34
PTCH1-210ENST00000468211 CCNFP41002 786 aa23.4■■□□□ 1.34
PTCH1-210ENST00000468211 VPS41P49754 854 aa23.4■■□□□ 1.34
PTCH1-210ENST00000468211 CDK16Q00536 496 aa23.4■■□□□ 1.34
PTCH1-210ENST00000468211 AIMP2Q13155 320 aaKnown RBP23.4■■□□□ 1.34
PTCH1-210ENST00000468211 KCNJ11Q14654 390 aa23.4■■□□□ 1.34
PTCH1-210ENST00000468211 NR6A1Q15406 480 aa23.4■■□□□ 1.34
PTCH1-210ENST00000468211 ACSBG2Q5FVE4 666 aa23.4■■□□□ 1.34
PTCH1-210ENST00000468211 ANKRD22Q5VYY1 191 aa23.4■■□□□ 1.34
PTCH1-210ENST00000468211 MRNIPQ6NTE8 343 aa23.4■■□□□ 1.34
PTCH1-210ENST00000468211 CENPUQ71F23 418 aa23.4■■□□□ 1.34
PTCH1-210ENST00000468211 RNF44Q7L0R7 432 aa23.4■■□□□ 1.34
PTCH1-210ENST00000468211 SDCCAG8Q86SQ7 713 aaPredicted RBP23.4■■□□□ 1.34
PTCH1-210ENST00000468211 CUZD1Q86UP6 607 aa23.4■■□□□ 1.34
PTCH1-210ENST00000468211 PRR7Q8TB68 274 aa23.4■■□□□ 1.34
PTCH1-210ENST00000468211 MAIP1Q8WWC4 291 aa23.4■■□□□ 1.34
PTCH1-210ENST00000468211 ACAT2Q9BWD1 397 aa23.4■■□□□ 1.34
PTCH1-210ENST00000468211 SLC29A3Q9BZD2 475 aa23.4■■□□□ 1.34
PTCH1-210ENST00000468211 ZC3H7BQ9UGR2 993 aaKnown RBP23.4■■□□□ 1.34
PTCH1-210ENST00000468211 UNC79Q9P2D8 2635 aa23.39■■□□□ 1.34
PTCH1-210ENST00000468211 HYKKA2RU49 373 aa23.39■■□□□ 1.33
PTCH1-210ENST00000468211 VSTM2BA6NLU5 285 aa23.39■■□□□ 1.33
PTCH1-210ENST00000468211 ARHGEF33A8MVX0 844 aa23.39■■□□□ 1.33
PTCH1-210ENST00000468211 SRPX2O60687 465 aaPredicted RBP23.39■■□□□ 1.33
PTCH1-210ENST00000468211 CBX6O95503 412 aa23.39■■□□□ 1.33
PTCH1-210ENST00000468211 CCDC175P0C221 793 aa23.39■■□□□ 1.33
PTCH1-210ENST00000468211 HIF1AQ16665 826 aa23.39■■□□□ 1.33
PTCH1-210ENST00000468211 C4orf17Q53FE4 359 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms