RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	SGTA	O43765	313 aa		11.71	□□□□□ -0.53
CTNS-205	ENST00000467663	GPC4	O75487	556 aa		11.71	□□□□□ -0.53
CTNS-205	ENST00000467663	TSPAN12	O95859	305 aa		11.71	□□□□□ -0.53
CTNS-205	ENST00000467663	SERPINE1	P05121	402 aa		11.71	□□□□□ -0.53
CTNS-205	ENST00000467663	F7	P08709	466 aa	Predicted RBP	11.71	□□□□□ -0.53
CTNS-205	ENST00000467663	MPST	P25325	297 aa		11.71	□□□□□ -0.53
CTNS-205	ENST00000467663	CCR7	P32248	378 aa		11.71	□□□□□ -0.53
CTNS-205	ENST00000467663	HK2	P52789	917 aa		11.71	□□□□□ -0.53
CTNS-205	ENST00000467663	CDKL1	Q00532	357 aa		11.71	□□□□□ -0.53
CTNS-205	ENST00000467663	GALNT1	Q10472	559 aa	Predicted RBP	11.71	□□□□□ -0.53
CTNS-205	ENST00000467663	DLG1	Q12959	904 aa		11.71	□□□□□ -0.53
CTNS-205	ENST00000467663	COL9A2	Q14055	689 aa	Predicted RBP	11.71	□□□□□ -0.53
CTNS-205	ENST00000467663	ZNF460	Q14592	562 aa		11.71	□□□□□ -0.53
CTNS-205	ENST00000467663	TGIF1	Q15583	401 aa		11.71	□□□□□ -0.53
CTNS-205	ENST00000467663	TMEM164	Q5U3C3	297 aa		11.71	□□□□□ -0.53
CTNS-205	ENST00000467663	C16orf46	Q6P387	395 aa		11.71	□□□□□ -0.53
CTNS-205	ENST00000467663	WASH2P	Q6VEQ5	465 aa		11.71	□□□□□ -0.53
CTNS-205	ENST00000467663	CCDC81	Q6ZN84	652 aa		11.71	□□□□□ -0.53
CTNS-205	ENST00000467663	MICALCL	Q6ZW33	695 aa		11.71	□□□□□ -0.53
CTNS-205	ENST00000467663	PIWIL4	Q7Z3Z4	852 aa	Known RBP	11.71	□□□□□ -0.53
CTNS-205	ENST00000467663	ARHGAP22	Q7Z5H3	698 aa		11.71	□□□□□ -0.53
CTNS-205	ENST00000467663	DTX1	Q86Y01	620 aa		11.71	□□□□□ -0.53
CTNS-205	ENST00000467663	CPNE9	Q8IYJ1	553 aa		11.71	□□□□□ -0.53
CTNS-205	ENST00000467663	TMEM151A	Q8N4L1	468 aa		11.71	□□□□□ -0.53
CTNS-205	ENST00000467663	BEND7	Q8N7W2	519 aa	Predicted RBP	11.71	□□□□□ -0.53
CTNS-205	ENST00000467663	OR2L2	Q8NH16	312 aa		11.71	□□□□□ -0.53
CTNS-205	ENST00000467663	PPP1R14C	Q8TAE6	165 aa		11.71	□□□□□ -0.53
CTNS-205	ENST00000467663	HM13	Q8TCT9	377 aa		11.71	□□□□□ -0.53
CTNS-205	ENST00000467663	SLC39A7	Q92504	469 aa		11.71	□□□□□ -0.53
CTNS-205	ENST00000467663	ELMO1	Q92556	727 aa		11.71	□□□□□ -0.53
CTNS-205	ENST00000467663	SGF29	Q96ES7	293 aa		11.71	□□□□□ -0.53
CTNS-205	ENST00000467663	WBP1	Q96G27	269 aa		11.71	□□□□□ -0.53
CTNS-205	ENST00000467663	FOPNL	Q96NB1	174 aa		11.71	□□□□□ -0.53
CTNS-205	ENST00000467663	ZNF317	Q96PQ6	595 aa	Predicted RBP	11.71	□□□□□ -0.53
CTNS-205	ENST00000467663	TAAR9	Q96RI9	348 aa		11.71	□□□□□ -0.53
CTNS-205	ENST00000467663	TRMO	Q9BU70	441 aa		11.71	□□□□□ -0.53
CTNS-205	ENST00000467663	OSGEPL1	Q9H4B0	414 aa		11.71	□□□□□ -0.53
CTNS-205	ENST00000467663	EPB41L1	Q9H4G0	881 aa		11.71	□□□□□ -0.53
CTNS-205	ENST00000467663	WASH6P	Q9NQA3	447 aa		11.71	□□□□□ -0.53
CTNS-205	ENST00000467663	THAP1	Q9NVV9	213 aa		11.71	□□□□□ -0.53
CTNS-205	ENST00000467663	SCHIP1	Q9P0W5	487 aa	Predicted RBP	11.71	□□□□□ -0.53
CTNS-205	ENST00000467663	ATRX	P46100	2492 aa		11.71	□□□□□ -0.53
CTNS-205	ENST00000467663	BPTF	Q12830	3046 aa		11.7	□□□□□ -0.54
CTNS-205	ENST00000467663	SLC5A10	A0PJK1	596 aa		11.7	□□□□□ -0.54
CTNS-205	ENST00000467663	PABPN1L	A6NDY0	278 aa	Known RBP	11.7	□□□□□ -0.54
CTNS-205	ENST00000467663	EIF4E1B	A6NMX2	242 aa	Known RBP	11.7	□□□□□ -0.54
CTNS-205	ENST00000467663	IQCF5	A8MTL0	148 aa		11.7	□□□□□ -0.54
CTNS-205	ENST00000467663		B4E171	279 aa		11.7	□□□□□ -0.54
CTNS-205	ENST00000467663		G3V2L1	256 aa		11.7	□□□□□ -0.54
CTNS-205	ENST00000467663	STX16-NPEPL1	H3BU86	382 aa		11.7	□□□□□ -0.54
CTNS-205	ENST00000467663	STX16	O14662	325 aa		11.7	□□□□□ -0.54
CTNS-205	ENST00000467663	ZBTB14	O43829	449 aa		11.7	□□□□□ -0.54
CTNS-205	ENST00000467663	IPO13	O94829	963 aa	Known RBP	11.7	□□□□□ -0.54
CTNS-205	ENST00000467663	TGDS	O95455	350 aa		11.7	□□□□□ -0.54
CTNS-205	ENST00000467663	FAM107A	O95990	144 aa		11.7	□□□□□ -0.54
CTNS-205	ENST00000467663	IDS	P22304	550 aa		11.7	□□□□□ -0.54
CTNS-205	ENST00000467663	CSTF2	P33240	577 aa	Known RBP eCLIP	11.7	□□□□□ -0.54
CTNS-205	ENST00000467663	SLC19A1	P41440	591 aa		11.7	□□□□□ -0.54
CTNS-205	ENST00000467663	TSPAN7	P41732	249 aa		11.7	□□□□□ -0.54
CTNS-205	ENST00000467663	AP1S2	P56377	157 aa		11.7	□□□□□ -0.54
CTNS-205	ENST00000467663	DMPK	Q09013	629 aa		11.7	□□□□□ -0.54
CTNS-205	ENST00000467663	STX3	Q13277	289 aa		11.7	□□□□□ -0.54
CTNS-205	ENST00000467663	PCLAF	Q15004	111 aa		11.7	□□□□□ -0.54
CTNS-205	ENST00000467663	PLA2G4E	Q3MJ16	856 aa		11.7	□□□□□ -0.54
CTNS-205	ENST00000467663	SYTL3	Q4VX76	610 aa		11.7	□□□□□ -0.54
CTNS-205	ENST00000467663	ZFAND4	Q86XD8	727 aa		11.7	□□□□□ -0.54
CTNS-205	ENST00000467663	TRAPPC5	Q8IUR0	188 aa		11.7	□□□□□ -0.54
CTNS-205	ENST00000467663	TCAIM	Q8N3R3	496 aa		11.7	□□□□□ -0.54
CTNS-205	ENST00000467663	PHC3	Q8NDX5	983 aa		11.7	□□□□□ -0.54
CTNS-205	ENST00000467663	OR6Y1	Q8NGX8	325 aa		11.7	□□□□□ -0.54
CTNS-205	ENST00000467663	GIMAP7	Q8NHV1	300 aa		11.7	□□□□□ -0.54
CTNS-205	ENST00000467663	MAGEC3	Q8TD91	643 aa		11.7	□□□□□ -0.54
CTNS-205	ENST00000467663	EEF1AKMT1	Q8WVE0	214 aa		11.7	□□□□□ -0.54
CTNS-205	ENST00000467663	NCSTN	Q92542	709 aa		11.7	□□□□□ -0.54
CTNS-205	ENST00000467663	CNDP1	Q96KN2	507 aa		11.7	□□□□□ -0.54
CTNS-205	ENST00000467663	C7orf26	Q96N11	449 aa		11.7	□□□□□ -0.54
CTNS-205	ENST00000467663	ATOH8	Q96SQ7	321 aa		11.7	□□□□□ -0.54
CTNS-205	ENST00000467663	SIKE1	Q9BRV8	207 aa		11.7	□□□□□ -0.54
CTNS-205	ENST00000467663	DDA1	Q9BW61	102 aa		11.7	□□□□□ -0.54
CTNS-205	ENST00000467663	ZNF358	Q9NW07	568 aa		11.7	□□□□□ -0.54
CTNS-205	ENST00000467663	NUDT4	Q9NZJ9	180 aa		11.7	□□□□□ -0.54
CTNS-205	ENST00000467663	ZNF624	Q9P2J8	865 aa	Predicted RBP	11.7	□□□□□ -0.54
CTNS-205	ENST00000467663	ACSL5	Q9ULC5	683 aa		11.7	□□□□□ -0.54
CTNS-205	ENST00000467663	RNF112	Q9ULX5	631 aa		11.7	□□□□□ -0.54
CTNS-205	ENST00000467663	DNAJC16	Q9Y2G8	782 aa		11.7	□□□□□ -0.54
CTNS-205	ENST00000467663	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	11.7	□□□□□ -0.54
CTNS-205	ENST00000467663	TNPO3	Q9Y5L0	923 aa	Known RBP	11.7	□□□□□ -0.54
CTNS-205	ENST00000467663	ZFC3H1	O60293	1989 aa	Known RBP	11.7	□□□□□ -0.54
CTNS-205	ENST00000467663	LOC400499	M0QZD8	3231 aa		11.69	□□□□□ -0.54
CTNS-205	ENST00000467663	OR2AG2	A6NM03	316 aa		11.69	□□□□□ -0.54
CTNS-205	ENST00000467663	TCP11X1	B4DZS4	312 aa		11.69	□□□□□ -0.54
CTNS-205	ENST00000467663	BTN3A1	O00481	513 aa		11.69	□□□□□ -0.54
CTNS-205	ENST00000467663	KLK8	O60259	260 aa		11.69	□□□□□ -0.54
CTNS-205	ENST00000467663	NPHS1	O60500	1241 aa		11.69	□□□□□ -0.54
CTNS-205	ENST00000467663	VIP	P01282	170 aa		11.69	□□□□□ -0.54
CTNS-205	ENST00000467663	S100B	P04271	92 aa	Predicted RBP	11.69	□□□□□ -0.54
CTNS-205	ENST00000467663	VIM	P08670	466 aa	Known RBP	11.69	□□□□□ -0.54
CTNS-205	ENST00000467663	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	11.69	□□□□□ -0.54
CTNS-205	ENST00000467663	HIST1H2AD	P20671	130 aa		11.69	□□□□□ -0.54
CTNS-205	ENST00000467663	IMPDH1	P20839	514 aa		11.69	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms