RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 PEBP1P30086 187 aaKnown RBP13.54□□□□□ -0.24
CCHCR1-211ENST00000467553 PLTPP55058 493 aa13.54□□□□□ -0.24
CCHCR1-211ENST00000467553 KIR2DS3Q14952 304 aa13.54□□□□□ -0.24
CCHCR1-211ENST00000467553 IGFBP7Q16270 282 aa13.54□□□□□ -0.24
CCHCR1-211ENST00000467553 UGT3A1Q6NUS8 523 aa13.54□□□□□ -0.24
CCHCR1-211ENST00000467553 CAPN12Q6ZSI9 719 aa13.54□□□□□ -0.24
CCHCR1-211ENST00000467553 PALM2Q8IXS6 379 aa13.54□□□□□ -0.24
CCHCR1-211ENST00000467553 RAB42Q8N4Z0 105 aa13.54□□□□□ -0.24
CCHCR1-211ENST00000467553 LINC01555Q8NAE3 123 aa13.54□□□□□ -0.24
CCHCR1-211ENST00000467553 OR2L8Q8NGY9 312 aa13.54□□□□□ -0.24
CCHCR1-211ENST00000467553 PYROXD1Q8WU10 500 aa13.54□□□□□ -0.24
CCHCR1-211ENST00000467553 N4BP2L2Q92802 583 aaPredicted RBP13.54□□□□□ -0.24
CCHCR1-211ENST00000467553 KCNJ9Q92806 393 aa13.54□□□□□ -0.24
CCHCR1-211ENST00000467553 WDR83Q9BRX9 315 aaKnown RBP13.54□□□□□ -0.24
CCHCR1-211ENST00000467553 DHRS4Q9BTZ2 278 aa13.54□□□□□ -0.24
CCHCR1-211ENST00000467553 SLC25A23Q9BV35 468 aa13.54□□□□□ -0.24
CCHCR1-211ENST00000467553 RAB17Q9H0T7 212 aa13.54□□□□□ -0.24
CCHCR1-211ENST00000467553 MLXIPLQ9NP71 852 aa13.54□□□□□ -0.24
CCHCR1-211ENST00000467553 SAYSD1Q9NPB0 183 aa13.54□□□□□ -0.24
CCHCR1-211ENST00000467553 ACSS2Q9NR19 701 aa13.54□□□□□ -0.24
CCHCR1-211ENST00000467553 MED16Q9Y2X0 877 aa13.54□□□□□ -0.24
CCHCR1-211ENST00000467553 ZNF451Q9Y4E5 1061 aa13.54□□□□□ -0.24
CCHCR1-211ENST00000467553 SPTBP11277 2137 aa13.54□□□□□ -0.24
CCHCR1-211ENST00000467553 A0A0J9YY10 115 aa13.53□□□□□ -0.24
CCHCR1-211ENST00000467553 TMEM150CB9EJG8 249 aa13.53□□□□□ -0.24
CCHCR1-211ENST00000467553 E7ESA3 106 aa13.53□□□□□ -0.24
CCHCR1-211ENST00000467553 KLHL41O60662 606 aa13.53□□□□□ -0.24
CCHCR1-211ENST00000467553 SNRNP200O75643 2136 aaKnown RBP13.53□□□□□ -0.24
CCHCR1-211ENST00000467553 MCM3P25205 808 aa13.53□□□□□ -0.24
CCHCR1-211ENST00000467553 ATP5DP30049 168 aa13.53□□□□□ -0.24
CCHCR1-211ENST00000467553 RORAP35398 523 aa13.53□□□□□ -0.24
CCHCR1-211ENST00000467553 PGDP52209 483 aa13.53□□□□□ -0.24
CCHCR1-211ENST00000467553 RRADP55042 308 aa13.53□□□□□ -0.24
CCHCR1-211ENST00000467553 SLC7A5Q01650 507 aa13.53□□□□□ -0.24
CCHCR1-211ENST00000467553 GPS2Q13227 327 aa13.53□□□□□ -0.24
CCHCR1-211ENST00000467553 SF1Q15637 639 aaKnown RBP13.53□□□□□ -0.24
CCHCR1-211ENST00000467553 SLC5A12Q1EHB4 618 aa13.53□□□□□ -0.24
CCHCR1-211ENST00000467553 RBM20Q5T481 1227 aaKnown RBP13.53□□□□□ -0.24
CCHCR1-211ENST00000467553 PRAMEF17Q5VTA0 474 aa13.53□□□□□ -0.24
CCHCR1-211ENST00000467553 STEAP4Q687X5 459 aa13.53□□□□□ -0.24
CCHCR1-211ENST00000467553 FAM199XQ6PEV8 388 aaPredicted RBP13.53□□□□□ -0.24
CCHCR1-211ENST00000467553 KIAA0408Q6ZU52 694 aa13.53□□□□□ -0.24
CCHCR1-211ENST00000467553 MED25Q71SY5 747 aa13.53□□□□□ -0.24
CCHCR1-211ENST00000467553 CPNE9Q8IYJ1 553 aa13.53□□□□□ -0.24
CCHCR1-211ENST00000467553 C19orf47Q8N9M1 422 aaKnown RBP13.53□□□□□ -0.24
CCHCR1-211ENST00000467553 TMEM102Q8N9M5 508 aaPredicted RBP13.53□□□□□ -0.24
CCHCR1-211ENST00000467553 OR9A1PQ8NGU1 263 aa13.53□□□□□ -0.24
CCHCR1-211ENST00000467553 GIMAP7Q8NHV1 300 aa13.53□□□□□ -0.24
CCHCR1-211ENST00000467553 FLVCR1-AS1Q8TAF5 88 aa13.53□□□□□ -0.24
CCHCR1-211ENST00000467553 CD200R1Q8TD46 325 aa13.53□□□□□ -0.24
CCHCR1-211ENST00000467553 SLC22A18Q96BI1 424 aa13.53□□□□□ -0.24
CCHCR1-211ENST00000467553 CLIP3Q96DZ5 547 aa13.53□□□□□ -0.24
CCHCR1-211ENST00000467553 TCTN2Q96GX1 697 aa13.53□□□□□ -0.24
CCHCR1-211ENST00000467553 IP6K3Q96PC2 410 aa13.53□□□□□ -0.24
CCHCR1-211ENST00000467553 MENTQ9BUN1 341 aa13.53□□□□□ -0.24
CCHCR1-211ENST00000467553 RAB11FIP5Q9BXF6 653 aa13.53□□□□□ -0.24
CCHCR1-211ENST00000467553 ING2Q9H160 280 aa13.53□□□□□ -0.24
CCHCR1-211ENST00000467553 AKIRIN1Q9H9L7 192 aaPredicted RBP13.53□□□□□ -0.24
CCHCR1-211ENST00000467553 FAM60AQ9NP50 221 aa13.53□□□□□ -0.24
CCHCR1-211ENST00000467553 TAS2R13Q9NYV9 303 aa13.53□□□□□ -0.24
CCHCR1-211ENST00000467553 GRHL1Q9NZI5 618 aa13.53□□□□□ -0.24
CCHCR1-211ENST00000467553 KLHL42Q9P2K6 505 aa13.53□□□□□ -0.24
CCHCR1-211ENST00000467553 TRMT6Q9UJA5 497 aaKnown RBP13.53□□□□□ -0.24
CCHCR1-211ENST00000467553 SNX7Q9UNH6 387 aa13.53□□□□□ -0.24
CCHCR1-211ENST00000467553 KLHL20Q9Y2M5 609 aa13.53□□□□□ -0.24
CCHCR1-211ENST00000467553 PRRC2CQ9Y520 2896 aaKnown RBP13.53□□□□□ -0.24
CCHCR1-211ENST00000467553 RP1L1Q8IWN7 2480 aaPredicted RBP13.52□□□□□ -0.24
CCHCR1-211ENST00000467553 ARHGEF33A8MVX0 844 aa13.52□□□□□ -0.25
CCHCR1-211ENST00000467553 ZBTB14O43829 449 aa13.52□□□□□ -0.25
CCHCR1-211ENST00000467553 PSIP1O75475 530 aaKnown RBP13.52□□□□□ -0.25
CCHCR1-211ENST00000467553 CEACAM4O75871 244 aa13.52□□□□□ -0.25
CCHCR1-211ENST00000467553 SYF2O95926 243 aaKnown RBP13.52□□□□□ -0.25
CCHCR1-211ENST00000467553 IGHEP01854 428 aa13.52□□□□□ -0.25
CCHCR1-211ENST00000467553 CATP04040 527 aaKnown RBP13.52□□□□□ -0.25
CCHCR1-211ENST00000467553 MPC1LP0DKB6 136 aa13.52□□□□□ -0.25
CCHCR1-211ENST00000467553 CYP2A7P20853 494 aa13.52□□□□□ -0.25
CCHCR1-211ENST00000467553 AGXTP21549 392 aa13.52□□□□□ -0.25
CCHCR1-211ENST00000467553 SKIV2L2P42285 1042 aaKnown RBP13.52□□□□□ -0.25
CCHCR1-211ENST00000467553 MGAT5Q09328 741 aa13.52□□□□□ -0.25
CCHCR1-211ENST00000467553 TSTA3Q13630 321 aaPredicted RBP13.52□□□□□ -0.25
CCHCR1-211ENST00000467553 TRADDQ15628 312 aa13.52□□□□□ -0.25
CCHCR1-211ENST00000467553 ZIC1Q15915 447 aa13.52□□□□□ -0.25
CCHCR1-211ENST00000467553 WHAMMP3Q1A5X7 153 aa13.52□□□□□ -0.25
CCHCR1-211ENST00000467553 CYHR1Q6ZMK1 362 aa13.52□□□□□ -0.25
CCHCR1-211ENST00000467553 CDHR3Q6ZTQ4 885 aa13.52□□□□□ -0.25
CCHCR1-211ENST00000467553 NEK10Q6ZWH5 1172 aa13.52□□□□□ -0.25
CCHCR1-211ENST00000467553 ZNF572Q7Z3I7 529 aaPredicted RBP13.52□□□□□ -0.25
CCHCR1-211ENST00000467553 CCDC25Q86WR0 208 aa13.52□□□□□ -0.25
CCHCR1-211ENST00000467553 CNTN4Q8IWV2 1026 aa13.52□□□□□ -0.25
CCHCR1-211ENST00000467553 EFCAB3Q8N7B9 438 aa13.52□□□□□ -0.25
CCHCR1-211ENST00000467553 GPATCH11Q8N954 259 aa13.52□□□□□ -0.25
CCHCR1-211ENST00000467553 GALNT11Q8NCW6 608 aa13.52□□□□□ -0.25
CCHCR1-211ENST00000467553 OR1L3Q8NH93 324 aa13.52□□□□□ -0.25
CCHCR1-211ENST00000467553 ADAMTS17Q8TE56 1095 aa13.52□□□□□ -0.25
CCHCR1-211ENST00000467553 EEF1AKMT1Q8WVE0 214 aa13.52□□□□□ -0.25
CCHCR1-211ENST00000467553 PKP4Q99569 1192 aa13.52□□□□□ -0.25
CCHCR1-211ENST00000467553 LRRC1Q9BTT6 524 aa13.52□□□□□ -0.25
CCHCR1-211ENST00000467553 SLC7A5P2Q9GIP4 190 aa13.52□□□□□ -0.25
CCHCR1-211ENST00000467553 CHST8Q9H2A9 424 aa13.52□□□□□ -0.25
CCHCR1-211ENST00000467553 ACTR5Q9H9F9 607 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms