RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 CCDC153Q494R4 210 aa15.44■□□□□ 0.06
GPC1-207ENST00000466624 CAPN13Q6MZZ7 669 aaPredicted RBP15.44■□□□□ 0.06
GPC1-207ENST00000466624 LCTLQ6UWM7 567 aa15.44■□□□□ 0.06
GPC1-207ENST00000466624 C4orf33Q8N1A6 199 aa15.44■□□□□ 0.06
GPC1-207ENST00000466624 PPFIBP2Q8ND30 876 aa15.44■□□□□ 0.06
GPC1-207ENST00000466624 UBTD2Q8WUN7 234 aa15.44■□□□□ 0.06
GPC1-207ENST00000466624 LIN37Q96GY3 246 aaPredicted RBP15.44■□□□□ 0.06
GPC1-207ENST00000466624 CCDC74BQ96LY2 380 aa15.44■□□□□ 0.06
GPC1-207ENST00000466624 ATG10Q9H0Y0 220 aa15.44■□□□□ 0.06
GPC1-207ENST00000466624 SEMA6CQ9H3T2 930 aa15.44■□□□□ 0.06
GPC1-207ENST00000466624 ZNF768Q9H5H4 540 aaKnown RBP15.44■□□□□ 0.06
GPC1-207ENST00000466624 TMBIM4Q9HC24 238 aa15.44■□□□□ 0.06
GPC1-207ENST00000466624 KLK4Q9Y5K2 254 aa15.44■□□□□ 0.06
GPC1-207ENST00000466624 KNTC1P50748 2209 aa15.43■□□□□ 0.06
GPC1-207ENST00000466624 NCF1BA6NI72 391 aaPredicted RBP15.43■□□□□ 0.06
GPC1-207ENST00000466624 NCF1CA8MVU1 366 aaPredicted RBP15.43■□□□□ 0.06
GPC1-207ENST00000466624 UBXN8O00124 270 aa15.43■□□□□ 0.06
GPC1-207ENST00000466624 TK2O00142 265 aa15.43■□□□□ 0.06
GPC1-207ENST00000466624 CSO75390 466 aaKnown RBP15.43■□□□□ 0.06
GPC1-207ENST00000466624 SBK3P0C264 359 aa15.43■□□□□ 0.06
GPC1-207ENST00000466624 NCF1P14598 390 aaPredicted RBP15.43■□□□□ 0.06
GPC1-207ENST00000466624 CDH3P22223 829 aa15.43■□□□□ 0.06
GPC1-207ENST00000466624 KCNA4P22459 653 aa15.43■□□□□ 0.06
GPC1-207ENST00000466624 ALDH18A1P54886 795 aaKnown RBP15.43■□□□□ 0.06
GPC1-207ENST00000466624 ABATP80404 500 aa15.43■□□□□ 0.06
GPC1-207ENST00000466624 PTCHD3Q3KNS1 767 aa15.43■□□□□ 0.06
GPC1-207ENST00000466624 N4BP2L1Q5TBK1 243 aaPredicted RBP15.43■□□□□ 0.06
GPC1-207ENST00000466624 CACHD1Q5VU97 1274 aa15.43■□□□□ 0.06
GPC1-207ENST00000466624 PRAMEF13Q5VWM6 474 aa15.43■□□□□ 0.06
GPC1-207ENST00000466624 METTL2BQ6P1Q9 378 aaKnown RBP15.43■□□□□ 0.06
GPC1-207ENST00000466624 SUSD1Q6UWL2 747 aa15.43■□□□□ 0.06
GPC1-207ENST00000466624 CDHR3Q6ZTQ4 885 aa15.43■□□□□ 0.06
GPC1-207ENST00000466624 FAM92BQ6ZTR7 304 aa15.43■□□□□ 0.06
GPC1-207ENST00000466624 DGLUCYQ7Z3D6 616 aa15.43■□□□□ 0.06
GPC1-207ENST00000466624 B3GNT8Q7Z7M8 397 aa15.43■□□□□ 0.06
GPC1-207ENST00000466624 TAX1BP1Q86VP1 789 aa15.43■□□□□ 0.06
GPC1-207ENST00000466624 C2orf73Q8N5S3 287 aaPredicted RBP15.43■□□□□ 0.06
GPC1-207ENST00000466624 OR2L3Q8NG85 312 aa15.43■□□□□ 0.06
GPC1-207ENST00000466624 KLHL6Q8WZ60 621 aa15.43■□□□□ 0.06
GPC1-207ENST00000466624 EXT2Q93063 718 aa15.43■□□□□ 0.06
GPC1-207ENST00000466624 SLC41A2Q96JW4 573 aa15.43■□□□□ 0.06
GPC1-207ENST00000466624 MAP3K3Q99759 626 aa15.43■□□□□ 0.06
GPC1-207ENST00000466624 MIPEPQ99797 713 aa15.43■□□□□ 0.06
GPC1-207ENST00000466624 TMEM79Q9BSE2 394 aa15.43■□□□□ 0.06
GPC1-207ENST00000466624 STRADBQ9C0K7 418 aa15.43■□□□□ 0.06
GPC1-207ENST00000466624 CHRNA10Q9GZZ6 450 aa15.43■□□□□ 0.06
GPC1-207ENST00000466624 CENPHQ9H3R5 247 aa15.43■□□□□ 0.06
GPC1-207ENST00000466624 WWOXQ9NZC7 414 aa15.43■□□□□ 0.06
GPC1-207ENST00000466624 ANKMY1Q9P2S6 941 aa15.43■□□□□ 0.06
GPC1-207ENST00000466624 DCHS1Q96JQ0 3298 aa15.43■□□□□ 0.06
GPC1-207ENST00000466624 STX16-NPEPL1H3BU86 382 aa15.42■□□□□ 0.06
GPC1-207ENST00000466624 STX16O14662 325 aa15.42■□□□□ 0.06
GPC1-207ENST00000466624 TAPBPO15533 448 aa15.42■□□□□ 0.06
GPC1-207ENST00000466624 KIF1CO43896 1103 aaKnown RBP15.42■□□□□ 0.06
GPC1-207ENST00000466624 SMIM24O75264 130 aa15.42■□□□□ 0.06
GPC1-207ENST00000466624 RASSF9O75901 435 aa15.42■□□□□ 0.06
GPC1-207ENST00000466624 ZBTB11O95625 1053 aaPredicted RBP15.42■□□□□ 0.06
GPC1-207ENST00000466624 GFAPP14136 432 aa15.42■□□□□ 0.06
GPC1-207ENST00000466624 JUPP14923 745 aa15.42■□□□□ 0.06
GPC1-207ENST00000466624 TAC1P20366 129 aa15.42■□□□□ 0.06
GPC1-207ENST00000466624 HRH2P25021 359 aa15.42■□□□□ 0.06
GPC1-207ENST00000466624 CMPK1P30085 196 aa15.42■□□□□ 0.06
GPC1-207ENST00000466624 NFKB2Q00653 900 aa15.42■□□□□ 0.06
GPC1-207ENST00000466624 PRDX1Q06830 199 aaKnown RBP15.42■□□□□ 0.06
GPC1-207ENST00000466624 EIF3IQ13347 325 aaKnown RBP15.42■□□□□ 0.06
GPC1-207ENST00000466624 SETDB1Q15047 1291 aa15.42■□□□□ 0.06
GPC1-207ENST00000466624 SF1Q15637 639 aaKnown RBP15.42■□□□□ 0.06
GPC1-207ENST00000466624 PHF19Q5T6S3 580 aa15.42■□□□□ 0.06
GPC1-207ENST00000466624 ICE2Q659A1 982 aa15.42■□□□□ 0.06
GPC1-207ENST00000466624 EXOC3L1Q86VI1 746 aa15.42■□□□□ 0.06
GPC1-207ENST00000466624 FBXO39Q8N4B4 442 aa15.42■□□□□ 0.06
GPC1-207ENST00000466624 RDH11Q8TC12 318 aa15.42■□□□□ 0.06
GPC1-207ENST00000466624 ZUFSPQ96AP4 578 aa15.42■□□□□ 0.06
GPC1-207ENST00000466624 MED8Q96G25 268 aa15.42■□□□□ 0.06
GPC1-207ENST00000466624 TRAPPC9Q96Q05 1148 aa15.42■□□□□ 0.06
GPC1-207ENST00000466624 HAUS8Q9BT25 410 aa15.42■□□□□ 0.06
GPC1-207ENST00000466624 IQCGQ9H095 443 aaKnown RBP15.42■□□□□ 0.06
GPC1-207ENST00000466624 INTS7Q9NVH2 962 aaKnown RBP15.42■□□□□ 0.06
GPC1-207ENST00000466624 KLHL3Q9UH77 587 aa15.42■□□□□ 0.06
GPC1-207ENST00000466624 TAC3Q9UHF0 121 aa15.42■□□□□ 0.06
GPC1-207ENST00000466624 MID2Q9UJV3 735 aa15.42■□□□□ 0.06
GPC1-207ENST00000466624 EMCNQ9ULC0 261 aa15.42■□□□□ 0.06
GPC1-207ENST00000466624 BTRCQ9Y297 605 aa15.42■□□□□ 0.06
GPC1-207ENST00000466624 TNPO3Q9Y5L0 923 aaKnown RBP15.42■□□□□ 0.06
GPC1-207ENST00000466624 KIF26BQ2KJY2 2108 aa15.41■□□□□ 0.06
GPC1-207ENST00000466624 IGHV5-51A0A0C4DH38 117 aa15.41■□□□□ 0.06
GPC1-207ENST00000466624 TYROBPO43914 113 aa15.41■□□□□ 0.06
GPC1-207ENST00000466624 PLIN3O60664 434 aa15.41■□□□□ 0.06
GPC1-207ENST00000466624 STK16O75716 305 aa15.41■□□□□ 0.06
GPC1-207ENST00000466624 PROCP04070 461 aa15.41■□□□□ 0.06
GPC1-207ENST00000466624 NPPBP16860 134 aa15.41■□□□□ 0.06
GPC1-207ENST00000466624 NELFEP18615 380 aaKnown RBP15.41■□□□□ 0.06
GPC1-207ENST00000466624 MPSTP25325 297 aa15.41■□□□□ 0.06
GPC1-207ENST00000466624 PSMB5P28074 263 aa15.41■□□□□ 0.06
GPC1-207ENST00000466624 LSSP48449 732 aa15.41■□□□□ 0.06
GPC1-207ENST00000466624 CLDN6P56747 220 aa15.41■□□□□ 0.06
GPC1-207ENST00000466624 PCBP2Q15366 365 aaKnown RBP eCLIP15.41■□□□□ 0.06
GPC1-207ENST00000466624 THEMIS2Q5TEJ8 643 aa15.41■□□□□ 0.06
GPC1-207ENST00000466624 AGBL2Q5U5Z8 902 aa15.41■□□□□ 0.06
GPC1-207ENST00000466624 C16orf46Q6P387 395 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms