RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 RHCGQ9UBD6 479 aa1.89□□□□□ -2.11
CCDC93-205ENST00000466171 DDX25Q9UHL0 483 aaKnown RBP1.89□□□□□ -2.11
CCDC93-205ENST00000466171 ZDHHC2Q9UIJ5 367 aa1.89□□□□□ -2.11
CCDC93-205ENST00000466171 ANAPC5Q9UJX4 755 aa1.89□□□□□ -2.11
CCDC93-205ENST00000466171 TMEM184BQ9Y519 407 aaPredicted RBP1.89□□□□□ -2.11
CCDC93-205ENST00000466171 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP1.89□□□□□ -2.11
CCDC93-205ENST00000466171 PRRC2AP48634 2157 aaKnown RBP1.89□□□□□ -2.11
CCDC93-205ENST00000466171 HEPACAM2A8MVW5 462 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 A8MXE2 369 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 ZNF197O14709 1029 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 TSPAN1O60635 241 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 TBCAO75347 108 aaKnown RBP1.88□□□□□ -2.11
CCDC93-205ENST00000466171 CELF2O95319 508 aaKnown RBP1.88□□□□□ -2.11
CCDC93-205ENST00000466171 GCNT3O95395 438 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 PENKP01210 267 aaPredicted RBP1.88□□□□□ -2.11
CCDC93-205ENST00000466171 H1F0P07305 194 aaKnown RBP1.88□□□□□ -2.11
CCDC93-205ENST00000466171 CCDC175P0C221 793 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 KRTAP1-4P0C5Y4 121 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 OR52Z1P0C646 297 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 LINGO3P0C6S8 592 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 CAPN2P17655 700 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 ERCC2P18074 760 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 PCGF2P35227 344 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 RAB28P51157 221 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 ZNF75DP51815 510 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 RAD23AP54725 363 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 TPD52P55327 224 aaPredicted RBP1.88□□□□□ -2.11
CCDC93-205ENST00000466171 CDK3Q00526 305 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 HSPB3Q12988 150 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 GPR17Q13304 367 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 COG2Q14746 738 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 NECTIN1Q15223 517 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 HLA-BQ31612 363 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 RAB6CQ53S08 254 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 KRBOX4Q5JUW0 171 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 ARMC4Q5T2S8 1044 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 GCNT6Q5T4J0 391 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 GPRIN3Q6ZVF9 776 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 CHST3Q7LGC8 479 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 GALNTL5Q7Z4T8 443 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 DNAJB7Q7Z6W7 309 aaPredicted RBP1.88□□□□□ -2.11
CCDC93-205ENST00000466171 CENPVQ7Z7K6 275 aaPredicted RBP1.88□□□□□ -2.11
CCDC93-205ENST00000466171 SLFN11Q7Z7L1 901 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 MFN1Q8IWA4 741 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 ZNF595Q8IYB9 648 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 FAM9BQ8IZU0 186 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 Q8N377 158 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 DNAJC22Q8N4W6 341 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 CAMKVQ8NCB2 501 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 OR10S1Q8NGN2 331 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 OR5M8Q8NGP6 311 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 EXD1Q8NHP7 514 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 KIF18AQ8NI77 898 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 DAZLQ92904 295 aaKnown RBP1.88□□□□□ -2.11
CCDC93-205ENST00000466171 HDAC11Q96DB2 347 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 MTERF3Q96E29 417 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 SPATA17Q96L03 361 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 NSMCE3Q96MG7 304 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 ZNF558Q96NG5 402 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 MS4A10Q96PG2 267 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 GBP5Q96PP8 586 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 USP28Q96RU2 1077 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 KRT12Q99456 494 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 SOSTQ9BQB4 213 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 NAA11Q9BSU3 229 aaPredicted RBP1.88□□□□□ -2.11
CCDC93-205ENST00000466171 RPP25Q9BUL9 199 aaKnown RBP1.88□□□□□ -2.11
CCDC93-205ENST00000466171 TRAF4Q9BUZ4 470 aaPredicted RBP1.88□□□□□ -2.11
CCDC93-205ENST00000466171 NUP85Q9BW27 656 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 GPR88Q9GZN0 384 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 RAB6CQ9H0N0 254 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 DPAGT1Q9H3H5 408 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 NOL11Q9H8H0 719 aaKnown RBP1.88□□□□□ -2.11
CCDC93-205ENST00000466171 GRPEL1Q9HAV7 217 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 HHATLQ9HCP6 504 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 GPR83Q9NYM4 423 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 ERAP1Q9NZ08 941 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 WBP11Q9Y2W2 641 aaKnown RBP1.88□□□□□ -2.11
CCDC93-205ENST00000466171 CCL27Q9Y4X3 112 aa1.88□□□□□ -2.11
CCDC93-205ENST00000466171 SPIN1Q9Y657 262 aaPredicted RBP1.88□□□□□ -2.11
CCDC93-205ENST00000466171 IGLV9-49A0A0B4J1Y8 123 aa1.87□□□□□ -2.11
CCDC93-205ENST00000466171 A0A1W2PRQ8 180 aa1.87□□□□□ -2.11
CCDC93-205ENST00000466171 ELOVL7A1L3X0 281 aa1.87□□□□□ -2.11
CCDC93-205ENST00000466171 ANKUB1A6NFN9 424 aa1.87□□□□□ -2.11
CCDC93-205ENST00000466171 TRIM77I1YAP6 450 aa1.87□□□□□ -2.11
CCDC93-205ENST00000466171 KLF11O14901 512 aa1.87□□□□□ -2.11
CCDC93-205ENST00000466171 WISP2O76076 250 aa1.87□□□□□ -2.11
CCDC93-205ENST00000466171 C22orf31O95567 290 aa1.87□□□□□ -2.11
CCDC93-205ENST00000466171 ACP2P11117 423 aa1.87□□□□□ -2.11
CCDC93-205ENST00000466171 FDPSP14324 419 aaKnown RBP1.87□□□□□ -2.11
CCDC93-205ENST00000466171 GLULP15104 373 aa1.87□□□□□ -2.11
CCDC93-205ENST00000466171 CBLP22681 906 aa1.87□□□□□ -2.11
CCDC93-205ENST00000466171 HSPA4P34932 840 aa1.87□□□□□ -2.11
CCDC93-205ENST00000466171 MAGEA11P43364 429 aa1.87□□□□□ -2.11
CCDC93-205ENST00000466171 ZNF41P51814 821 aaPredicted RBP1.87□□□□□ -2.11
CCDC93-205ENST00000466171 RBPJQ06330 500 aa1.87□□□□□ -2.11
CCDC93-205ENST00000466171 COX10Q12887 443 aa1.87□□□□□ -2.11
CCDC93-205ENST00000466171 GAGE2BQ13066 116 aa1.87□□□□□ -2.11
CCDC93-205ENST00000466171 P2RY6Q15077 328 aa1.87□□□□□ -2.11
CCDC93-205ENST00000466171 GAGE2EQ4V326 116 aa1.87□□□□□ -2.11
CCDC93-205ENST00000466171 CYP4A22Q5TCH4 519 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms