RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 SUSD1Q6UWL2 747 aa7.11□□□□□ -1.27
USP48-206ENST00000464577 CCDC190Q86UF4 302 aa7.11□□□□□ -1.27
USP48-206ENST00000464577 SYTL1Q8IYJ3 562 aa7.11□□□□□ -1.27
USP48-206ENST00000464577 C10orf111Q8N326 155 aa7.11□□□□□ -1.27
USP48-206ENST00000464577 PAF1Q8N7H5 531 aa7.11□□□□□ -1.27
USP48-206ENST00000464577 ASCC1Q8N9N2 400 aaKnown RBP7.11□□□□□ -1.27
USP48-206ENST00000464577 SIMC1Q8NDZ2 872 aa7.11□□□□□ -1.27
USP48-206ENST00000464577 MDGA1Q8NFP4 955 aa7.11□□□□□ -1.27
USP48-206ENST00000464577 PPP1R13LQ8WUF5 828 aa7.11□□□□□ -1.27
USP48-206ENST00000464577 RASSF5Q8WWW0 418 aa7.11□□□□□ -1.27
USP48-206ENST00000464577 USP7Q93009 1102 aa7.11□□□□□ -1.27
USP48-206ENST00000464577 PAAF1Q9BRP4 392 aa7.11□□□□□ -1.27
USP48-206ENST00000464577 WBP11Q9Y2W2 641 aaKnown RBP7.11□□□□□ -1.27
USP48-206ENST00000464577 SAMHD1Q9Y3Z3 626 aaKnown RBP7.11□□□□□ -1.27
USP48-206ENST00000464577 OARD1Q9Y530 152 aa7.11□□□□□ -1.27
USP48-206ENST00000464577 PCDHB1Q9Y5F3 818 aa7.11□□□□□ -1.27
USP48-206ENST00000464577 N6AMT1Q9Y5N5 214 aa7.11□□□□□ -1.27
USP48-206ENST00000464577 LYVE1Q9Y5Y7 322 aa7.11□□□□□ -1.27
USP48-206ENST00000464577 C17orf102A2RUQ5 167 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 PDZK1P1A8MUH7 402 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 MYO1GB0I1T2 1018 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 TNFRSF10AO00220 468 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 CAPN5O15484 640 aaPredicted RBP7.1□□□□□ -1.27
USP48-206ENST00000464577 GUCY1B2O75343 617 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 ULK1O75385 1050 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 PARNO95453 639 aaKnown RBP7.1□□□□□ -1.27
USP48-206ENST00000464577 ZNF682O95780 498 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 C9P02748 559 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 EBLN1P0CF75 366 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 PRPS2P11908 318 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 MYCLP1P12525 358 aaPredicted RBP7.1□□□□□ -1.27
USP48-206ENST00000464577 BCKDHAP12694 445 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 OR1E1P30953 314 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 HOXC8P31273 242 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 PIK3CBP42338 1070 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 BRCC3P46736 316 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 KRT6CP48668 564 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 OR2B6P58173 313 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 RPS14P62263 151 aaKnown RBP7.1□□□□□ -1.27
USP48-206ENST00000464577 OLR1P78380 273 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 HMGCS1Q01581 520 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 ABRQ12979 859 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 CAMK2GQ13555 558 aaPredicted RBP7.1□□□□□ -1.27
USP48-206ENST00000464577 IRF5Q13568 498 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 LAPTM4AQ15012 233 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 INO80DQ53TQ3 878 aaPredicted RBP7.1□□□□□ -1.27
USP48-206ENST00000464577 SPANXN2Q5MJ10 180 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 FAM171A1Q5VUB5 890 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 DLK2Q6UY11 383 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 EIF3MQ7L2H7 374 aaKnown RBP7.1□□□□□ -1.27
USP48-206ENST00000464577 MRPL10Q7Z7H8 261 aaKnown RBP7.1□□□□□ -1.27
USP48-206ENST00000464577 P3H2Q8IVL5 708 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 RGL4Q8IZJ4 473 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 GPC2Q8N158 579 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 DNAJC22Q8N4W6 341 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 CELF2-AS1Q8N7Q2 184 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 ATG16L2Q8NAA4 619 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 GALNT6Q8NCL4 622 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 SLAIN1Q8ND83 568 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 LPPQ93052 612 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 TESCQ96BS2 214 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 TMCO6Q96DC7 493 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 CRELD1Q96HD1 420 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 COL21A1Q96P44 957 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 PSKH2Q96QS6 385 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 HHIPQ96QV1 700 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 EPYCQ99645 322 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 TINF2Q9BSI4 451 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 NTMT1Q9BV86 223 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 CEP44Q9C0F1 390 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 NUAK2Q9H093 628 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 FBXO44Q9H4M3 255 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 REEP1Q9H902 201 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 ELOVL2Q9NXB9 296 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 THUMPD1Q9NXG2 353 aaKnown RBP7.1□□□□□ -1.27
USP48-206ENST00000464577 EHD3Q9NZN3 535 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 FKBPLQ9UIM3 349 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 ZMYM5Q9UJ78 669 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 AGO1Q9UL18 857 aaKnown RBP7.1□□□□□ -1.27
USP48-206ENST00000464577 PCDHGA6Q9Y5G7 932 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 KLK4Q9Y5K2 254 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 AP1M2Q9Y6Q5 423 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 A0A075B6Q4 140 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 CLCA1A8K7I4 914 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 PLK4O00444 970 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 GPR182O15218 404 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 TAPBPO15533 448 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 NDUFB5O43674 189 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 B3GAT3O94766 335 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 PRLP01236 227 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 IGLV3-27P01718 113 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 ACPPP15309 386 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 CR2P20023 1033 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 HOXD9P28356 352 aaPredicted RBP7.1□□□□□ -1.27
USP48-206ENST00000464577 EPHA2P29317 976 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 SOX6P35712 828 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 GGT2P36268 569 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 PIK3CGP48736 1102 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 HSPA7P48741 367 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 VLDLRP98155 873 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms