RNA–Protein interactions for RNA: ENST00000464539.1

TNRC6A-205, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 1,853 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-205ENST00000464539 VAPAQ9P0L0 249 aa11.24□□□□□ -0.61
TNRC6A-205ENST00000464539 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.24□□□□□ -0.61
TNRC6A-205ENST00000464539 TRMT6Q9UJA5 497 aaKnown RBP11.24□□□□□ -0.61
TNRC6A-205ENST00000464539 STOML2Q9UJZ1 356 aa11.24□□□□□ -0.61
TNRC6A-205ENST00000464539 RNF112Q9ULX5 631 aa11.24□□□□□ -0.61
TNRC6A-205ENST00000464539 SAMD4AQ9UPU9 718 aaKnown RBP11.24□□□□□ -0.61
TNRC6A-205ENST00000464539 INVSQ9Y283 1065 aa11.24□□□□□ -0.61
TNRC6A-205ENST00000464539 NEUROG3Q9Y4Z2 214 aa11.24□□□□□ -0.61
TNRC6A-205ENST00000464539 LRRC14BA6NHZ5 514 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 CLCA1A8K7I4 914 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 GRXCR1A8MXD5 290 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 SUPT3HB4E1H0 165 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 PDE9AO76083 593 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 ACADMP11310 421 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 IL32P24001 234 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 FMO4P31512 558 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 PTGS2P35354 604 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 SEMA3AQ14563 771 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 SMN1Q16637 294 aaKnown RBP11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 TMEM240Q5SV17 173 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 FAM171BQ6P995 826 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 C19orf48Q6RUI8 117 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 CALHM3Q86XJ0 350 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 RYBPQ8N488 228 aaPredicted RBP11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 CHST13Q8NET6 341 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 SLC13A3Q8WWT9 602 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 HRASLS5Q96KN8 279 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 FRMD6Q96NE9 622 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 TRNT1Q96Q11 434 aaKnown RBP11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 LPIN3Q9BQK8 851 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 TTLL2Q9BWV7 592 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 GTPBP2Q9BX10 602 aaKnown RBP11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 MTIF3Q9H2K0 278 aaKnown RBP11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 WDCPQ9H6R7 721 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 SLC28A3Q9HAS3 691 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 C14orf119Q9NWQ9 140 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 ERVK13-1Q9NX77 482 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 SPASTQ9UBP0 616 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 UTS2RQ9UKP6 389 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 PCDHB5Q9Y5E4 795 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 MROH6A6NGR9 719 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 OR6C70A6NIJ9 312 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 A8MV72 311 aaPredicted RBP11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 LEUTXA8MZ59 168 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 MAFKO60675 156 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 CPNE3O75131 537 aaKnown RBP11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 PMPCBO75439 489 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 SERPINA1P01009 418 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 IL6P05231 212 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 MSL3P1P0C860 447 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 NPR3P17342 541 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 ARF4P18085 180 aaPredicted RBP11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 CPN2P22792 545 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 HOXA9P31269 272 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 PXNP49023 591 aaPredicted RBP11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 CXCR3P49682 368 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 RPP38P78345 283 aaKnown RBP11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 CTAG1AP78358 180 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 TFF2Q03403 129 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 NPRL3Q12980 569 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 MAD2L1Q13257 205 aaPredicted RBP11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 TMEM132BQ14DG7 1078 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 MAPKAPK3Q16644 382 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 PRSS36Q5K4E3 855 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 PRAMEF19Q5SWL8 479 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 FAM219BQ5XKK7 198 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 KDELC1Q6UW63 502 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 GDPGP1Q6ZNW5 385 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 DPY19L3Q6ZPD9 716 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 Q6ZSR9 355 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 GPRIN3Q6ZVF9 776 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 ZNF367Q7RTV3 350 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 PLPP6Q8IY26 295 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 FBXL6Q8N531 539 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 ASB15Q8WXK1 588 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 HERVK_113Q902F9 699 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 NDRG1Q92597 394 aaKnown RBP11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 OMA1Q96E52 524 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 ZNF382Q96SR6 550 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 ACOX2Q99424 681 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 TSEN34Q9BSV6 310 aaKnown RBP11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 COLEC11Q9BWP8 271 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 SLC25A51Q9H1U9 297 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 RETREG1Q9H6L5 497 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 IL1RAPQ9NPH3 570 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 C12orf4Q9NQ89 552 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 KRT84Q9NSB2 600 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 RBM22Q9NW64 420 aaKnown RBP eCLIP11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 C1orf109Q9NX04 203 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 RABL2AQ9UBK7 228 aaPredicted RBP11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 EIF3KQ9UBQ5 218 aaKnown RBP11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 NUFIP1Q9UHK0 495 aaKnown RBP11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 TBX21Q9UL17 535 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 AGO1Q9UL18 857 aaKnown RBP11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 KLHL20Q9Y2M5 609 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 U3KQV3 271 aa11.23□□□□□ -0.61
TNRC6A-205ENST00000464539 PIEZO1Q92508 2521 aa11.22□□□□□ -0.61
TNRC6A-205ENST00000464539 TRIP11Q15643 1979 aa11.22□□□□□ -0.61
TNRC6A-205ENST00000464539 LOC100506127A0A0U1RQW1 187 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms