RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 DCBLD2Q96PD2 775 aa13.98□□□□□ -0.17
SQSTM1-205ENST00000464493 PAFAH2Q99487 392 aa13.98□□□□□ -0.17
SQSTM1-205ENST00000464493 MIPEPQ99797 713 aa13.98□□□□□ -0.17
SQSTM1-205ENST00000464493 ACAT2Q9BWD1 397 aa13.98□□□□□ -0.17
SQSTM1-205ENST00000464493 CHRNA10Q9GZZ6 450 aa13.98□□□□□ -0.17
SQSTM1-205ENST00000464493 FANCEQ9HB96 536 aa13.98□□□□□ -0.17
SQSTM1-205ENST00000464493 FAM60AQ9NP50 221 aa13.98□□□□□ -0.17
SQSTM1-205ENST00000464493 ARL15Q9NXU5 204 aa13.98□□□□□ -0.17
SQSTM1-205ENST00000464493 STOX2Q9P2F5 926 aaPredicted RBP13.98□□□□□ -0.17
SQSTM1-205ENST00000464493 CTNNAL1Q9UBT7 734 aa13.98□□□□□ -0.17
SQSTM1-205ENST00000464493 KLHL20Q9Y2M5 609 aa13.98□□□□□ -0.17
SQSTM1-205ENST00000464493 AHCTF1Q8WYP5 2266 aa13.97□□□□□ -0.17
SQSTM1-205ENST00000464493 EXOC1LA0A1B0GW35 172 aa13.97□□□□□ -0.17
SQSTM1-205ENST00000464493 NPEPPSL1A6NEC2 478 aa13.97□□□□□ -0.17
SQSTM1-205ENST00000464493 SRRM3A6NNA2 597 aaPredicted RBP13.97□□□□□ -0.17
SQSTM1-205ENST00000464493 TARM1B6A8C7 271 aa13.97□□□□□ -0.17
SQSTM1-205ENST00000464493 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.97□□□□□ -0.17
SQSTM1-205ENST00000464493 STMND1H3BQB6 276 aa13.97□□□□□ -0.17
SQSTM1-205ENST00000464493 SLC35E2BP0CK96 405 aa13.97□□□□□ -0.17
SQSTM1-205ENST00000464493 MAGP20916 626 aa13.97□□□□□ -0.17
SQSTM1-205ENST00000464493 CMPK1P30085 196 aa13.97□□□□□ -0.17
SQSTM1-205ENST00000464493 SERPINB9P50453 376 aa13.97□□□□□ -0.17
SQSTM1-205ENST00000464493 ATP6V0D1P61421 351 aa13.97□□□□□ -0.17
SQSTM1-205ENST00000464493 PRDX1Q06830 199 aaKnown RBP13.97□□□□□ -0.17
SQSTM1-205ENST00000464493 SLC29A2Q14542 456 aa13.97□□□□□ -0.17
SQSTM1-205ENST00000464493 TSNQ15631 228 aaKnown RBP13.97□□□□□ -0.17
SQSTM1-205ENST00000464493 AGTRAPQ6RW13 159 aa13.97□□□□□ -0.17
SQSTM1-205ENST00000464493 MBOAT1Q6ZNC8 495 aa13.97□□□□□ -0.17
SQSTM1-205ENST00000464493 LRRC69Q6ZNQ3 347 aa13.97□□□□□ -0.17
SQSTM1-205ENST00000464493 CDHR3Q6ZTQ4 885 aa13.97□□□□□ -0.17
SQSTM1-205ENST00000464493 LRRC56Q8IYG6 542 aaPredicted RBP13.97□□□□□ -0.17
SQSTM1-205ENST00000464493 UBXN10Q96LJ8 280 aa13.97□□□□□ -0.17
SQSTM1-205ENST00000464493 FCRL4Q96PJ5 515 aa13.97□□□□□ -0.17
SQSTM1-205ENST00000464493 DPH1Q9BZG8 443 aa13.97□□□□□ -0.17
SQSTM1-205ENST00000464493 SPRY4Q9C004 299 aa13.97□□□□□ -0.17
SQSTM1-205ENST00000464493 ABCF3Q9NUQ8 709 aa13.97□□□□□ -0.17
SQSTM1-205ENST00000464493 UTP6Q9NYH9 597 aaKnown RBP13.97□□□□□ -0.17
SQSTM1-205ENST00000464493 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.97□□□□□ -0.17
SQSTM1-205ENST00000464493 ZNF180Q9UJW8 692 aa13.97□□□□□ -0.17
SQSTM1-205ENST00000464493 V9GYY5 206 aaPredicted RBP13.97□□□□□ -0.17
SQSTM1-205ENST00000464493 SDK2Q58EX2 2172 aa13.97□□□□□ -0.17
SQSTM1-205ENST00000464493 ZZEF1O43149 2961 aa13.96□□□□□ -0.17
SQSTM1-205ENST00000464493 A0A087WV48 116 aa13.96□□□□□ -0.17
SQSTM1-205ENST00000464493 TMEM150CB9EJG8 249 aa13.96□□□□□ -0.17
SQSTM1-205ENST00000464493 STK17BO94768 372 aa13.96□□□□□ -0.17
SQSTM1-205ENST00000464493 GUCA1CO95843 209 aa13.96□□□□□ -0.17
SQSTM1-205ENST00000464493 LIPCP11150 499 aa13.96□□□□□ -0.17
SQSTM1-205ENST00000464493 CD1DP15813 335 aa13.96□□□□□ -0.17
SQSTM1-205ENST00000464493 CNTFP26441 200 aa13.96□□□□□ -0.17
SQSTM1-205ENST00000464493 SLC26A3P40879 764 aa13.96□□□□□ -0.17
SQSTM1-205ENST00000464493 GRIA3P42263 894 aa13.96□□□□□ -0.17
SQSTM1-205ENST00000464493 VSNL1P62760 191 aa13.96□□□□□ -0.17
SQSTM1-205ENST00000464493 NAE1Q13564 534 aa13.96□□□□□ -0.17
SQSTM1-205ENST00000464493 CSHL1Q14406 222 aa13.96□□□□□ -0.17
SQSTM1-205ENST00000464493 NAA25Q14CX7 972 aa13.96□□□□□ -0.17
SQSTM1-205ENST00000464493 PPP1R3AQ16821 1122 aa13.96□□□□□ -0.17
SQSTM1-205ENST00000464493 THEMIS2Q5TEJ8 643 aa13.96□□□□□ -0.17
SQSTM1-205ENST00000464493 FCRL6Q6DN72 434 aa13.96□□□□□ -0.17
SQSTM1-205ENST00000464493 PWWP2BQ6NUJ5 590 aa13.96□□□□□ -0.17
SQSTM1-205ENST00000464493 TAOK1Q7L7X3 1001 aa13.96□□□□□ -0.17
SQSTM1-205ENST00000464493 CCDC91Q7Z6B0 441 aa13.96□□□□□ -0.17
SQSTM1-205ENST00000464493 ADAMTSL2Q86TH1 951 aa13.96□□□□□ -0.17
SQSTM1-205ENST00000464493 TBC1D1Q86TI0 1168 aaPredicted RBP13.96□□□□□ -0.17
SQSTM1-205ENST00000464493 DTX1Q86Y01 620 aa13.96□□□□□ -0.17
SQSTM1-205ENST00000464493 DNAJC22Q8N4W6 341 aa13.96□□□□□ -0.17
SQSTM1-205ENST00000464493 DCAKDQ8WVC6 231 aa13.96□□□□□ -0.17
SQSTM1-205ENST00000464493 ATL1Q8WXF7 558 aa13.96□□□□□ -0.17
SQSTM1-205ENST00000464493 N4BP2L2Q92802 583 aaPredicted RBP13.96□□□□□ -0.17
SQSTM1-205ENST00000464493 FBXL8Q96CD0 374 aa13.96□□□□□ -0.17
SQSTM1-205ENST00000464493 MED8Q96G25 268 aa13.96□□□□□ -0.17
SQSTM1-205ENST00000464493 ULBP3Q9BZM4 244 aa13.96□□□□□ -0.17
SQSTM1-205ENST00000464493 UNKQ9C0B0 810 aaKnown RBP13.96□□□□□ -0.17
SQSTM1-205ENST00000464493 ATG10Q9H0Y0 220 aa13.96□□□□□ -0.17
SQSTM1-205ENST00000464493 EPB41L4BQ9H329 900 aa13.96□□□□□ -0.17
SQSTM1-205ENST00000464493 MRPS30Q9NP92 439 aaKnown RBP13.96□□□□□ -0.17
SQSTM1-205ENST00000464493 CCDC177Q9NQR7 707 aaPredicted RBP13.96□□□□□ -0.17
SQSTM1-205ENST00000464493 SNX15Q9NRS6 342 aa13.96□□□□□ -0.17
SQSTM1-205ENST00000464493 TAC3Q9UHF0 121 aa13.96□□□□□ -0.17
SQSTM1-205ENST00000464493 SERTAD3Q9UJW9 196 aa13.96□□□□□ -0.17
SQSTM1-205ENST00000464493 TLK1Q9UKI8 766 aa13.96□□□□□ -0.17
SQSTM1-205ENST00000464493 PILRAQ9UKJ1 303 aa13.96□□□□□ -0.17
SQSTM1-205ENST00000464493 ACOT9Q9Y305 439 aa13.96□□□□□ -0.17
SQSTM1-205ENST00000464493 TMEM184BQ9Y519 407 aaPredicted RBP13.96□□□□□ -0.17
SQSTM1-205ENST00000464493 OARD1Q9Y530 152 aa13.96□□□□□ -0.17
SQSTM1-205ENST00000464493 KLK4Q9Y5K2 254 aa13.96□□□□□ -0.17
SQSTM1-205ENST00000464493 USP24Q9UPU5 2620 aa13.96□□□□□ -0.17
SQSTM1-205ENST00000464493 EPG5Q9HCE0 2579 aa13.96□□□□□ -0.17
SQSTM1-205ENST00000464493 A0A087X1B8 175 aa13.95□□□□□ -0.18
SQSTM1-205ENST00000464493 KLK10O43240 276 aa13.95□□□□□ -0.18
SQSTM1-205ENST00000464493 KRT38O76015 456 aa13.95□□□□□ -0.18
SQSTM1-205ENST00000464493 KIAA0754O94854 1291 aa13.95□□□□□ -0.18
SQSTM1-205ENST00000464493 CCNDBP1O95273 360 aa13.95□□□□□ -0.18
SQSTM1-205ENST00000464493 C2P06681 752 aa13.95□□□□□ -0.18
SQSTM1-205ENST00000464493 ANXA5P08758 320 aa13.95□□□□□ -0.18
SQSTM1-205ENST00000464493 ZNF28P17035 718 aa13.95□□□□□ -0.18
SQSTM1-205ENST00000464493 CCND1P24385 295 aa13.95□□□□□ -0.18
SQSTM1-205ENST00000464493 TYK2P29597 1187 aa13.95□□□□□ -0.18
SQSTM1-205ENST00000464493 GMPRP36959 345 aa13.95□□□□□ -0.18
SQSTM1-205ENST00000464493 SERPINB8P50452 374 aa13.95□□□□□ -0.18
SQSTM1-205ENST00000464493 CSRP3P50461 194 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms