RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 ZBTB14O43829 449 aa16.41■□□□□ 0.22
VPS52-215ENST00000464425 ERLIN1O75477 346 aa16.41■□□□□ 0.22
VPS52-215ENST00000464425 FAM155BO75949 473 aa16.41■□□□□ 0.22
VPS52-215ENST00000464425 INHBAP08476 426 aa16.41■□□□□ 0.22
VPS52-215ENST00000464425 SPTBP11277 2137 aa16.41■□□□□ 0.22
VPS52-215ENST00000464425 LIFP15018 202 aa16.41■□□□□ 0.22
VPS52-215ENST00000464425 WT1P19544 449 aaPredicted RBP16.41■□□□□ 0.22
VPS52-215ENST00000464425 PSMB5P28074 263 aa16.41■□□□□ 0.22
VPS52-215ENST00000464425 MSH2P43246 934 aa16.41■□□□□ 0.22
VPS52-215ENST00000464425 RGS4P49798 205 aa16.41■□□□□ 0.22
VPS52-215ENST00000464425 SERPINB9P50453 376 aa16.41■□□□□ 0.22
VPS52-215ENST00000464425 TSTA3Q13630 321 aaPredicted RBP16.41■□□□□ 0.22
VPS52-215ENST00000464425 CYP2A13Q16696 494 aa16.41■□□□□ 0.22
VPS52-215ENST00000464425 DEFB110Q30KQ9 67 aa16.41■□□□□ 0.22
VPS52-215ENST00000464425 TMEM126BQ8IUX1 230 aa16.41■□□□□ 0.22
VPS52-215ENST00000464425 ESX1Q8N693 406 aa16.41■□□□□ 0.22
VPS52-215ENST00000464425 OR1L3Q8NH93 324 aa16.41■□□□□ 0.22
VPS52-215ENST00000464425 LINGO1Q96FE5 620 aa16.41■□□□□ 0.22
VPS52-215ENST00000464425 TCTN2Q96GX1 697 aa16.41■□□□□ 0.22
VPS52-215ENST00000464425 PAFAH2Q99487 392 aa16.41■□□□□ 0.22
VPS52-215ENST00000464425 PPCSQ9HAB8 311 aa16.41■□□□□ 0.22
VPS52-215ENST00000464425 POPDC3Q9HBV1 291 aa16.41■□□□□ 0.22
VPS52-215ENST00000464425 SPATA7Q9P0W8 599 aa16.41■□□□□ 0.22
VPS52-215ENST00000464425 MTO1Q9Y2Z2 717 aaKnown RBP16.41■□□□□ 0.22
VPS52-215ENST00000464425 LOC101059948A0A1B0GTJ6 334 aa16.4■□□□□ 0.22
VPS52-215ENST00000464425 K7ENP7 123 aa16.4■□□□□ 0.22
VPS52-215ENST00000464425 HCRTR1O43613 425 aa16.4■□□□□ 0.22
VPS52-215ENST00000464425 PRICKLE3O43900 615 aaPredicted RBP16.4■□□□□ 0.22
VPS52-215ENST00000464425 SCRG1O75711 98 aa16.4■□□□□ 0.22
VPS52-215ENST00000464425 NUDT17P0C025 328 aa16.4■□□□□ 0.22
VPS52-215ENST00000464425 MAGP20916 626 aa16.4■□□□□ 0.22
VPS52-215ENST00000464425 CNTFP26441 200 aa16.4■□□□□ 0.22
VPS52-215ENST00000464425 OAS2P29728 719 aaKnown RBP16.4■□□□□ 0.22
VPS52-215ENST00000464425 KIAA1614Q5VZ46 1190 aa16.4■□□□□ 0.22
VPS52-215ENST00000464425 INO80CQ6PI98 192 aaPredicted RBP16.4■□□□□ 0.22
VPS52-215ENST00000464425 ADGRD1Q6QNK2 874 aa16.4■□□□□ 0.22
VPS52-215ENST00000464425 SUSD1Q6UWL2 747 aa16.4■□□□□ 0.22
VPS52-215ENST00000464425 GPR155Q7Z3F1 870 aa16.4■□□□□ 0.22
VPS52-215ENST00000464425 MYO1HQ8N1T3 1032 aa16.4■□□□□ 0.22
VPS52-215ENST00000464425 PPFIBP2Q8ND30 876 aa16.4■□□□□ 0.22
VPS52-215ENST00000464425 OR8K5Q8NH50 307 aa16.4■□□□□ 0.22
VPS52-215ENST00000464425 HMGCLL1Q8TB92 370 aa16.4■□□□□ 0.22
VPS52-215ENST00000464425 DCAKDQ8WVC6 231 aa16.4■□□□□ 0.22
VPS52-215ENST00000464425 DLG3Q92796 817 aa16.4■□□□□ 0.22
VPS52-215ENST00000464425 N4BP2L2Q92802 583 aaPredicted RBP16.4■□□□□ 0.22
VPS52-215ENST00000464425 TSPAN17Q96FV3 270 aa16.4■□□□□ 0.22
VPS52-215ENST00000464425 FCRL4Q96PJ5 515 aa16.4■□□□□ 0.22
VPS52-215ENST00000464425 MIPEPQ99797 713 aa16.4■□□□□ 0.22
VPS52-215ENST00000464425 ACAT2Q9BWD1 397 aa16.4■□□□□ 0.22
VPS52-215ENST00000464425 SYTL2Q9HCH5 934 aa16.4■□□□□ 0.22
VPS52-215ENST00000464425 SERTAD3Q9UJW9 196 aa16.4■□□□□ 0.22
VPS52-215ENST00000464425 ADAMTS6Q9UKP5 1117 aa16.4■□□□□ 0.22
VPS52-215ENST00000464425 A0A1W2PPV9 198 aa16.39■□□□□ 0.21
VPS52-215ENST00000464425 POC1B-GALNT4F8VUJ3 575 aa16.39■□□□□ 0.21
VPS52-215ENST00000464425 SLC16A8O95907 504 aa16.39■□□□□ 0.21
VPS52-215ENST00000464425 CCNYL3P0C7X3 344 aa16.39■□□□□ 0.21
VPS52-215ENST00000464425 GCAP28676 217 aa16.39■□□□□ 0.21
VPS52-215ENST00000464425 GRIA3P42263 894 aa16.39■□□□□ 0.21
VPS52-215ENST00000464425 PNLIPRP1P54315 467 aa16.39■□□□□ 0.21
VPS52-215ENST00000464425 SLC12A2P55011 1212 aa16.39■□□□□ 0.21
VPS52-215ENST00000464425 TAS2R39P59534 338 aa16.39■□□□□ 0.21
VPS52-215ENST00000464425 IL2P60568 153 aa16.39■□□□□ 0.21
VPS52-215ENST00000464425 COL9A2Q14055 689 aaPredicted RBP16.39■□□□□ 0.21
VPS52-215ENST00000464425 MAP7Q14244 749 aa16.39■□□□□ 0.21
VPS52-215ENST00000464425 LGSNQ5TDP6 509 aa16.39■□□□□ 0.21
VPS52-215ENST00000464425 LRRC8EQ6NSJ5 796 aa16.39■□□□□ 0.21
VPS52-215ENST00000464425 FIGLAQ6QHK4 219 aa16.39■□□□□ 0.21
VPS52-215ENST00000464425 TAOK1Q7L7X3 1001 aa16.39■□□□□ 0.21
VPS52-215ENST00000464425 FBXO15Q8NCQ5 510 aaPredicted RBP16.39■□□□□ 0.21
VPS52-215ENST00000464425 MRRFQ96E11 262 aaKnown RBP16.39■□□□□ 0.21
VPS52-215ENST00000464425 SPRTNQ9H040 489 aaPredicted RBP16.39■□□□□ 0.21
VPS52-215ENST00000464425 GPN2Q9H9Y4 310 aaPredicted RBP16.39■□□□□ 0.21
VPS52-215ENST00000464425 ABCF3Q9NUQ8 709 aa16.39■□□□□ 0.21
VPS52-215ENST00000464425 SNRNP200O75643 2136 aaKnown RBP16.39■□□□□ 0.21
VPS52-215ENST00000464425 ZFYVE26Q68DK2 2539 aa16.39■□□□□ 0.21
VPS52-215ENST00000464425 HMX2A2RU54 273 aa16.38■□□□□ 0.21
VPS52-215ENST00000464425 KRT38O76015 456 aa16.38■□□□□ 0.21
VPS52-215ENST00000464425 TSPAN12O95859 305 aa16.38■□□□□ 0.21
VPS52-215ENST00000464425 C8GP07360 202 aa16.38■□□□□ 0.21
VPS52-215ENST00000464425 CTSBP07858 339 aa16.38■□□□□ 0.21
VPS52-215ENST00000464425 MSL3P1P0C860 447 aa16.38■□□□□ 0.21
VPS52-215ENST00000464425 ERGP11308 486 aa16.38■□□□□ 0.21
VPS52-215ENST00000464425 STMN1P16949 149 aa16.38■□□□□ 0.21
VPS52-215ENST00000464425 CYP2A7P20853 494 aa16.38■□□□□ 0.21
VPS52-215ENST00000464425 RPA3P35244 121 aaPredicted RBP16.38■□□□□ 0.21
VPS52-215ENST00000464425 HSD17B2P37059 387 aa16.38■□□□□ 0.21
VPS52-215ENST00000464425 STAT5AP42229 794 aa16.38■□□□□ 0.21
VPS52-215ENST00000464425 ITGA1P56199 1179 aa16.38■□□□□ 0.21
VPS52-215ENST00000464425 YBX1P67809 324 aaKnown RBP16.38■□□□□ 0.21
VPS52-215ENST00000464425 ABHD18Q0P651 414 aa16.38■□□□□ 0.21
VPS52-215ENST00000464425 ZNF460Q14592 562 aa16.38■□□□□ 0.21
VPS52-215ENST00000464425 USP10Q14694 798 aaKnown RBP16.38■□□□□ 0.21
VPS52-215ENST00000464425 ARHGAP19Q14CB8 494 aa16.38■□□□□ 0.21
VPS52-215ENST00000464425 RASA2Q15283 850 aa16.38■□□□□ 0.21
VPS52-215ENST00000464425 ZKSCAN8Q15776 578 aaPredicted RBP16.38■□□□□ 0.21
VPS52-215ENST00000464425 FCRL6Q6DN72 434 aa16.38■□□□□ 0.21
VPS52-215ENST00000464425 TMEM207Q6UWW9 146 aa16.38■□□□□ 0.21
VPS52-215ENST00000464425 CEP97Q8IW35 865 aa16.38■□□□□ 0.21
VPS52-215ENST00000464425 SYTL1Q8IYJ3 562 aa16.38■□□□□ 0.21
VPS52-215ENST00000464425 DNAJC22Q8N4W6 341 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms