RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 CARNMT1Q8N4J0 409 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 UBL4BQ8N7F7 174 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 ZNF366Q8N895 744 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 SPATA4Q8NEY3 305 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 AZIN2Q96A70 460 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 SKA1Q96BD8 255 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 PRR11Q96HE9 360 aaPredicted RBP3.6□□□□□ -1.83
SCFD1-204ENST00000463622 RBM41Q96IZ5 413 aaKnown RBP3.6□□□□□ -1.83
SCFD1-204ENST00000463622 C1orf74Q96LT6 269 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 SMIM14Q96QK8 99 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 KRT12Q99456 494 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 TMEM121Q9BTD3 319 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 TRIM62Q9BVG3 475 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 ALG8Q9BVK2 526 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 TRIM4Q9C037 500 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 ZYG11BQ9C0D3 744 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 NEUROG2Q9H2A3 272 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 PDFQ9HBH1 243 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 USP29Q9HBJ7 922 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 PRSS16Q9NQE7 514 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 GDF3Q9NR23 364 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 THSD1Q9NS62 852 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 SERTAD4Q9NUC0 356 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 TMEM248Q9NWD8 314 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 DDX56Q9NY93 547 aaKnown RBP3.6□□□□□ -1.83
SCFD1-204ENST00000463622 SH3BP4Q9P0V3 963 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 AMACRQ9UHK6 382 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 ZDHHC8Q9ULC8 765 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 TTC7AQ9ULT0 858 aaPredicted RBP3.6□□□□□ -1.83
SCFD1-204ENST00000463622 HEY1Q9Y5J3 304 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 HEMK1Q9Y5R4 338 aaPredicted RBP3.6□□□□□ -1.83
SCFD1-204ENST00000463622 COL5A1P20908 1838 aaPredicted RBP3.6□□□□□ -1.83
SCFD1-204ENST00000463622 A0A1B0GVM2 712 aa3.59□□□□□ -1.83
SCFD1-204ENST00000463622 TCRBV7S3A2A0A539 114 aa3.59□□□□□ -1.83
SCFD1-204ENST00000463622 ZNF487B1APH4 448 aa3.59□□□□□ -1.83
SCFD1-204ENST00000463622 RASA4BC9J798 803 aa3.59□□□□□ -1.83
SCFD1-204ENST00000463622 APOC4-APOC2K7ER74 178 aa3.59□□□□□ -1.83
SCFD1-204ENST00000463622 DFFAO00273 331 aa3.59□□□□□ -1.83
SCFD1-204ENST00000463622 CES2O00748 559 aa3.59□□□□□ -1.83
SCFD1-204ENST00000463622 TTI1O43156 1089 aa3.59□□□□□ -1.83
SCFD1-204ENST00000463622 RASA4O43374 803 aa3.59□□□□□ -1.83
SCFD1-204ENST00000463622 LATO43561 262 aa3.59□□□□□ -1.83
SCFD1-204ENST00000463622 USP12O75317 370 aa3.59□□□□□ -1.83
SCFD1-204ENST00000463622 DNAJB5O75953 348 aa3.59□□□□□ -1.83
SCFD1-204ENST00000463622 METTL18O95568 372 aa3.59□□□□□ -1.83
SCFD1-204ENST00000463622 LATS1O95835 1130 aa3.59□□□□□ -1.83
SCFD1-204ENST00000463622 APOC2P02655 101 aa3.59□□□□□ -1.83
SCFD1-204ENST00000463622 PRKCGP05129 697 aa3.59□□□□□ -1.83
SCFD1-204ENST00000463622 GP1BAP07359 652 aa3.59□□□□□ -1.83
SCFD1-204ENST00000463622 CELA2AP08217 269 aa3.59□□□□□ -1.83
SCFD1-204ENST00000463622 GIMD1P0DJR0 217 aa3.59□□□□□ -1.83
SCFD1-204ENST00000463622 CKMT1AP12532 417 aa3.59□□□□□ -1.83
SCFD1-204ENST00000463622 NDUFB7P17568 137 aa3.59□□□□□ -1.83
SCFD1-204ENST00000463622 GKP32189 559 aa3.59□□□□□ -1.83
SCFD1-204ENST00000463622 CHKAP35790 457 aa3.59□□□□□ -1.83
SCFD1-204ENST00000463622 COILP38432 576 aaPredicted RBP3.59□□□□□ -1.83
SCFD1-204ENST00000463622 HCAR3P49019 387 aa3.59□□□□□ -1.83
SCFD1-204ENST00000463622 SLC11A2P49281 568 aa3.59□□□□□ -1.83
SCFD1-204ENST00000463622 VPS41P49754 854 aa3.59□□□□□ -1.83
SCFD1-204ENST00000463622 ZNF81P51508 661 aa3.59□□□□□ -1.83
SCFD1-204ENST00000463622 AIF1P55008 147 aa3.59□□□□□ -1.83
SCFD1-204ENST00000463622 MAXP61244 160 aa3.59□□□□□ -1.83
SCFD1-204ENST00000463622 GNA12Q03113 381 aa3.59□□□□□ -1.83
SCFD1-204ENST00000463622 SLC10A7Q0GE19 358 aa3.59□□□□□ -1.83
SCFD1-204ENST00000463622 GALNT2Q10471 571 aa3.59□□□□□ -1.83
SCFD1-204ENST00000463622 OVGP1Q12889 678 aa3.59□□□□□ -1.83
SCFD1-204ENST00000463622 PDK2Q15119 407 aa3.59□□□□□ -1.83
SCFD1-204ENST00000463622 SRSF7Q16629 238 aaKnown RBP eCLIP3.59□□□□□ -1.83
SCFD1-204ENST00000463622 CYP1B1Q16678 543 aa3.59□□□□□ -1.83
SCFD1-204ENST00000463622 DNTTIP2Q5QJE6 756 aaKnown RBP3.59□□□□□ -1.83
SCFD1-204ENST00000463622 ANKRD22Q5VYY1 191 aa3.59□□□□□ -1.83
SCFD1-204ENST00000463622 SERPINA13PQ6UXR4 307 aa3.59□□□□□ -1.83
SCFD1-204ENST00000463622 KDM7AQ6ZMT4 941 aa3.59□□□□□ -1.83
SCFD1-204ENST00000463622 TADA2BQ86TJ2 420 aa3.59□□□□□ -1.83
SCFD1-204ENST00000463622 ADIPOR2Q86V24 386 aa3.59□□□□□ -1.83
SCFD1-204ENST00000463622 PSTKQ8IV42 348 aaKnown RBP3.59□□□□□ -1.83
SCFD1-204ENST00000463622 UMODL1-AS1Q8N2C9 162 aa3.59□□□□□ -1.83
SCFD1-204ENST00000463622 KIF18AQ8NI77 898 aa3.59□□□□□ -1.83
SCFD1-204ENST00000463622 CCDC110Q8TBZ0 833 aa3.59□□□□□ -1.83
SCFD1-204ENST00000463622 DDI1Q8WTU0 396 aa3.59□□□□□ -1.83
SCFD1-204ENST00000463622 ARHGEF2Q92974 986 aaKnown RBP3.59□□□□□ -1.83
SCFD1-204ENST00000463622 TMA16Q96EY4 203 aaKnown RBP3.59□□□□□ -1.83
SCFD1-204ENST00000463622 MVB12AQ96EY5 273 aa3.59□□□□□ -1.83
SCFD1-204ENST00000463622 SLC35A4Q96G79 324 aa3.59□□□□□ -1.83
SCFD1-204ENST00000463622 QKIQ96PU8 341 aaKnown RBP eCLIP3.59□□□□□ -1.838e-7■■■■■ 54.9
SCFD1-204ENST00000463622 LRRC1Q9BTT6 524 aa3.59□□□□□ -1.83
SCFD1-204ENST00000463622 RSPH9Q9H1X1 276 aaPredicted RBP3.59□□□□□ -1.83
SCFD1-204ENST00000463622 ABCB8Q9NUT2 735 aa3.59□□□□□ -1.83
SCFD1-204ENST00000463622 RCOR3Q9P2K3 495 aaPredicted RBP3.59□□□□□ -1.83
SCFD1-204ENST00000463622 LSM7Q9UK45 103 aaKnown RBP3.59□□□□□ -1.83
SCFD1-204ENST00000463622 SCML1Q9UN30 329 aa3.59□□□□□ -1.83
SCFD1-204ENST00000463622 MAN2B2Q9Y2E5 1009 aa3.59□□□□□ -1.83
SCFD1-204ENST00000463622 ZNF510Q9Y2H8 683 aa3.59□□□□□ -1.83
SCFD1-204ENST00000463622 TBC1D30Q9Y2I9 924 aa3.59□□□□□ -1.83
SCFD1-204ENST00000463622 SPEF1Q9Y4P9 236 aa3.59□□□□□ -1.83
SCFD1-204ENST00000463622 MYOFQ9NZM1 2061 aa3.59□□□□□ -1.83
SCFD1-204ENST00000463622 TLN1Q9Y490 2541 aaKnown RBP3.59□□□□□ -1.83
SCFD1-204ENST00000463622 LY6G6EA0A0G2JKS1 128 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 A0A0U1RQS6 177 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 ENO4A6NNW6 628 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms