RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 ERN2Q76MJ5 926 aaKnown RBP9.65□□□□□ -0.86
PTPRD-207ENST00000463477 ZFAND4Q86XD8 727 aa9.65□□□□□ -0.86
PTPRD-207ENST00000463477 CAMK1DQ8IU85 385 aa9.65□□□□□ -0.86
PTPRD-207ENST00000463477 CHERPQ8IWX8 916 aaKnown RBP9.65□□□□□ -0.86
PTPRD-207ENST00000463477 TBC1D3Q8IZP1 549 aaPredicted RBP9.65□□□□□ -0.86
PTPRD-207ENST00000463477 MYO1HQ8N1T3 1032 aa9.65□□□□□ -0.86
PTPRD-207ENST00000463477 GALNT15Q8N3T1 639 aa9.65□□□□□ -0.86
PTPRD-207ENST00000463477 MFSD2AQ8NA29 543 aa9.65□□□□□ -0.86
PTPRD-207ENST00000463477 PAPD5Q8NDF8 572 aaKnown RBP9.65□□□□□ -0.86
PTPRD-207ENST00000463477 OR2T11Q8NH01 316 aa9.65□□□□□ -0.86
PTPRD-207ENST00000463477 NETO1Q8TDF5 533 aa9.65□□□□□ -0.86
PTPRD-207ENST00000463477 LRTOMTQ8WZ04 291 aa9.65□□□□□ -0.86
PTPRD-207ENST00000463477 TCEAL3Q969E4 200 aa9.65□□□□□ -0.86
PTPRD-207ENST00000463477 ARRDC3Q96B67 414 aa9.65□□□□□ -0.86
PTPRD-207ENST00000463477 ORAI3Q9BRQ5 295 aa9.65□□□□□ -0.86
PTPRD-207ENST00000463477 SPATA16Q9BXB7 569 aa9.65□□□□□ -0.86
PTPRD-207ENST00000463477 MRPS26Q9BYN8 205 aaKnown RBP9.65□□□□□ -0.86
PTPRD-207ENST00000463477 DYRK4Q9NR20 520 aa9.65□□□□□ -0.86
PTPRD-207ENST00000463477 RXFP3Q9NSD7 469 aa9.65□□□□□ -0.86
PTPRD-207ENST00000463477 UBAP1Q9NZ09 502 aa9.65□□□□□ -0.86
PTPRD-207ENST00000463477 GIMAP2Q9UG22 337 aa9.65□□□□□ -0.86
PTPRD-207ENST00000463477 TIMM22Q9Y584 194 aa9.65□□□□□ -0.86
PTPRD-207ENST00000463477 CEP192Q8TEP8 1941 aa9.65□□□□□ -0.86
PTPRD-207ENST00000463477 PLXNA2O75051 1894 aa9.65□□□□□ -0.86
PTPRD-207ENST00000463477 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.64□□□□□ -0.87
PTPRD-207ENST00000463477 A0A1W2PPC4 97 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 DHRS12A0PJE2 317 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 LNP1A1A4G5 178 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 ASPDHA6ND91 283 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 PLK4O00444 970 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 CDX4O14627 284 aaPredicted RBP9.64□□□□□ -0.87
PTPRD-207ENST00000463477 BCAT2O15382 392 aaPredicted RBP9.64□□□□□ -0.87
PTPRD-207ENST00000463477 FFAR2O15552 330 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 LATO43561 262 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 FAM58BPP0C7Q3 252 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 IL10P22301 178 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 JAK1P23458 1154 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 PSMA4P25789 261 aaKnown RBP9.64□□□□□ -0.87
PTPRD-207ENST00000463477 ITGB7P26010 798 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 HTR1EP28566 365 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 SERPINA4P29622 427 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 GRIA3P42263 894 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 RPL5P46777 297 aaKnown RBP9.64□□□□□ -0.87
PTPRD-207ENST00000463477 TAS2R38P59533 333 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 TRAF3Q13114 568 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 PRKG2Q13237 762 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 APOFQ13790 326 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 GTF2H2Q13888 395 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 TTLL9Q3SXZ7 439 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 POM121L1PQ3SYA9 428 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 ZNF805Q5CZA5 627 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 GPRC6AQ5T6X5 926 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 ZDHHC20Q5W0Z9 365 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 SULT1C3Q6IMI6 304 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 HMBOX1Q6NT76 420 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 GTF2H2CQ6P1K8 395 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 LETMD1Q6P1Q0 360 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 GOLGA7Q7Z5G4 137 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 SNX31Q8N9S9 440 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 HCAR2Q8TDS4 363 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 ECHDC3Q96DC8 303 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 PPP3R2Q96LZ3 170 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 SLC39A3Q9BRY0 314 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 MIR1-1HGQ9H1L0 117 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 ZDHHC6Q9H6R6 413 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 ASB8Q9H765 288 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 COQ10BQ9H8M1 238 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 PREBQ9HCU5 417 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 IL26Q9NPH9 171 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 AGPAT4Q9NRZ5 378 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 ASIC5Q9NY37 505 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 SNX13Q9Y5W8 968 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 DCHS1Q96JQ0 3298 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 CROCCQ5TZA2 2017 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 GLYATL1P3A0A0U1RQE8 302 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 C1orf232A0A0U1RR37 186 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 CCDC154A6NI56 674 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 NCF1BA6NI72 391 aaPredicted RBP9.64□□□□□ -0.87
PTPRD-207ENST00000463477 NCF1CA8MVU1 366 aaPredicted RBP9.64□□□□□ -0.87
PTPRD-207ENST00000463477 ARHGAP33O14559 1287 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 OR7A17O14581 309 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 LSM1O15116 133 aaKnown RBP9.64□□□□□ -0.87
PTPRD-207ENST00000463477 CFIP05156 583 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 SYPP08247 313 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 ALPIP09923 528 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 NCF1P14598 390 aaPredicted RBP9.64□□□□□ -0.87
PTPRD-207ENST00000463477 BPIP17213 487 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 CTPS1P17812 591 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 ENGP17813 658 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 GKP32189 559 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 HNF1BP35680 557 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 NUDT1P36639 197 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 ID4P47928 161 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 PIK3CGP48736 1102 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 RACK1P63244 317 aaKnown RBP9.64□□□□□ -0.87
PTPRD-207ENST00000463477 CDKL1Q00532 357 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 MYBPC1Q00872 1141 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 MAD2L1Q13257 205 aaPredicted RBP9.64□□□□□ -0.87
PTPRD-207ENST00000463477 NFYCQ13952 458 aa9.64□□□□□ -0.87
PTPRD-207ENST00000463477 PUM1Q14671 1186 aaKnown RBP eCLIP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms