RNA–Protein interactions for RNA: ENST00000462743.1

HPS1-206, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-206ENST00000462743 PLCL2Q9UPR0 1127 aa11.63□□□□□ -0.55
HPS1-206ENST00000462743 AP1M2Q9Y6Q5 423 aa11.63□□□□□ -0.55
HPS1-206ENST00000462743 FER1L5A0AVI2 2057 aa11.63□□□□□ -0.55
HPS1-206ENST00000462743 FREM2Q5SZK8 3169 aa11.62□□□□□ -0.55
HPS1-206ENST00000462743 OR2A25A4D2G3 310 aa11.62□□□□□ -0.55
HPS1-206ENST00000462743 TERTO14746 1132 aaKnown RBP11.62□□□□□ -0.55
HPS1-206ENST00000462743 SRPX2O60687 465 aaPredicted RBP11.62□□□□□ -0.55
HPS1-206ENST00000462743 PIAS1O75925 651 aa11.62□□□□□ -0.55
HPS1-206ENST00000462743 KIAA0754O94854 1291 aa11.62□□□□□ -0.55
HPS1-206ENST00000462743 RECKO95980 971 aa11.62□□□□□ -0.55
HPS1-206ENST00000462743 ENO2P09104 434 aaPredicted RBP11.62□□□□□ -0.55
HPS1-206ENST00000462743 HIST1H2AGP0C0S8 130 aaPredicted RBP11.62□□□□□ -0.55
HPS1-206ENST00000462743 HIST1H2ADP20671 130 aa11.62□□□□□ -0.55
HPS1-206ENST00000462743 MAGP20916 626 aa11.62□□□□□ -0.55
HPS1-206ENST00000462743 HRH2P25021 359 aa11.62□□□□□ -0.55
HPS1-206ENST00000462743 IMPA1P29218 277 aa11.62□□□□□ -0.55
HPS1-206ENST00000462743 PHBP35232 272 aa11.62□□□□□ -0.55
HPS1-206ENST00000462743 ITGA1P56199 1179 aa11.62□□□□□ -0.55
HPS1-206ENST00000462743 SLMAPQ14BN4 828 aa11.62□□□□□ -0.55
HPS1-206ENST00000462743 ZKSCAN8Q15776 578 aaPredicted RBP11.62□□□□□ -0.55
HPS1-206ENST00000462743 CRTC2Q53ET0 693 aaPredicted RBP11.62□□□□□ -0.55
HPS1-206ENST00000462743 ZC3H12BQ5HYM0 836 aaKnown RBP11.62□□□□□ -0.55
HPS1-206ENST00000462743 CEP97Q8IW35 865 aa11.62□□□□□ -0.55
HPS1-206ENST00000462743 CTAGE3PQ8IX95 158 aa11.62□□□□□ -0.55
HPS1-206ENST00000462743 PPM1NQ8N819 430 aa11.62□□□□□ -0.55
HPS1-206ENST00000462743 LINGO1Q96FE5 620 aa11.62□□□□□ -0.55
HPS1-206ENST00000462743 SLC45A3Q96JT2 553 aa11.62□□□□□ -0.55
HPS1-206ENST00000462743 HIST1H2AHQ96KK5 128 aa11.62□□□□□ -0.55
HPS1-206ENST00000462743 UBXN10Q96LJ8 280 aa11.62□□□□□ -0.55
HPS1-206ENST00000462743 CYTH2Q99418 400 aa11.62□□□□□ -0.55
HPS1-206ENST00000462743 HIST1H2AJQ99878 128 aa11.62□□□□□ -0.55
HPS1-206ENST00000462743 H2AFJQ9BTM1 129 aa11.62□□□□□ -0.55
HPS1-206ENST00000462743 TRIM54Q9BYV2 358 aa11.62□□□□□ -0.55
HPS1-206ENST00000462743 PCBD2Q9H0N5 130 aa11.62□□□□□ -0.55
HPS1-206ENST00000462743 CDC42EP4Q9H3Q1 356 aaKnown RBP11.62□□□□□ -0.55
HPS1-206ENST00000462743 ACSS3Q9H6R3 686 aa11.62□□□□□ -0.55
HPS1-206ENST00000462743 NINJ2Q9NZG7 142 aa11.62□□□□□ -0.55
HPS1-206ENST00000462743 CHD6Q8TD26 2715 aa11.62□□□□□ -0.55
HPS1-206ENST00000462743 CCDC88CQ9P219 2028 aa11.62□□□□□ -0.55
HPS1-206ENST00000462743 WDFY3Q8IZQ1 3526 aa11.61□□□□□ -0.55
HPS1-206ENST00000462743 LOC101059948A0A1B0GTJ6 334 aa11.61□□□□□ -0.55
HPS1-206ENST00000462743 KRT87PA6NCN2 255 aa11.61□□□□□ -0.55
HPS1-206ENST00000462743 TMEM150CB9EJG8 249 aa11.61□□□□□ -0.55
HPS1-206ENST00000462743 HCRTR1O43613 425 aa11.61□□□□□ -0.55
HPS1-206ENST00000462743 SCRG1O75711 98 aa11.61□□□□□ -0.55
HPS1-206ENST00000462743 CCNDBP1O95273 360 aa11.61□□□□□ -0.55
HPS1-206ENST00000462743 HBQ1P09105 142 aa11.61□□□□□ -0.55
HPS1-206ENST00000462743 CCNYL3P0C7X3 344 aa11.61□□□□□ -0.55
HPS1-206ENST00000462743 CMPK1P30085 196 aa11.61□□□□□ -0.55
HPS1-206ENST00000462743 RORAP35398 523 aa11.61□□□□□ -0.55
HPS1-206ENST00000462743 STAT5AP42229 794 aa11.61□□□□□ -0.55
HPS1-206ENST00000462743 GCGRP47871 477 aa11.61□□□□□ -0.55
HPS1-206ENST00000462743 CSRP3P50461 194 aa11.61□□□□□ -0.55
HPS1-206ENST00000462743 PGGT1BP53609 377 aa11.61□□□□□ -0.55
HPS1-206ENST00000462743 SLC12A2P55011 1212 aa11.61□□□□□ -0.55
HPS1-206ENST00000462743 CDKL1Q00532 357 aa11.61□□□□□ -0.55
HPS1-206ENST00000462743 USP10Q14694 798 aaKnown RBP11.61□□□□□ -0.55
HPS1-206ENST00000462743 PHKG1Q16816 387 aa11.61□□□□□ -0.55
HPS1-206ENST00000462743 ZNF425Q6IV72 752 aa11.61□□□□□ -0.55
HPS1-206ENST00000462743 FBXO42Q6P3S6 717 aa11.61□□□□□ -0.55
HPS1-206ENST00000462743 TLDC1Q6P9B6 456 aa11.61□□□□□ -0.55
HPS1-206ENST00000462743 AGTRAPQ6RW13 159 aa11.61□□□□□ -0.55
HPS1-206ENST00000462743 SBSNQ6UWP8 590 aa11.61□□□□□ -0.55
HPS1-206ENST00000462743 CCDC81Q6ZN84 652 aa11.61□□□□□ -0.55
HPS1-206ENST00000462743 GPR155Q7Z3F1 870 aa11.61□□□□□ -0.55
HPS1-206ENST00000462743 CCDC91Q7Z6B0 441 aa11.61□□□□□ -0.55
HPS1-206ENST00000462743 MCATQ8IVS2 390 aaKnown RBP11.61□□□□□ -0.55
HPS1-206ENST00000462743 FAM20CQ8IXL6 584 aa11.61□□□□□ -0.55
HPS1-206ENST00000462743 SYTL1Q8IYJ3 562 aa11.61□□□□□ -0.55
HPS1-206ENST00000462743 IL22RA1Q8N6P7 574 aa11.61□□□□□ -0.55
HPS1-206ENST00000462743 SLC38A9Q8NBW4 561 aa11.61□□□□□ -0.55
HPS1-206ENST00000462743 GALNT6Q8NCL4 622 aa11.61□□□□□ -0.55
HPS1-206ENST00000462743 ATL1Q8WXF7 558 aa11.61□□□□□ -0.55
HPS1-206ENST00000462743 SGPP1Q9BX95 441 aa11.61□□□□□ -0.55
HPS1-206ENST00000462743 DERL2Q9GZP9 239 aa11.61□□□□□ -0.55
HPS1-206ENST00000462743 KLHL25Q9H0H3 589 aa11.61□□□□□ -0.55
HPS1-206ENST00000462743 GPAMQ9HCL2 828 aa11.61□□□□□ -0.55
HPS1-206ENST00000462743 LHX9Q9NQ69 397 aa11.61□□□□□ -0.55
HPS1-206ENST00000462743 UTP6Q9NYH9 597 aaKnown RBP11.61□□□□□ -0.55
HPS1-206ENST00000462743 EURLQ9NYK6 297 aa11.61□□□□□ -0.55
HPS1-206ENST00000462743 STOX2Q9P2F5 926 aaPredicted RBP11.61□□□□□ -0.55
HPS1-206ENST00000462743 TSR3Q9UJK0 312 aaKnown RBP11.61□□□□□ -0.55
HPS1-206ENST00000462743 SNX7Q9UNH6 387 aa11.61□□□□□ -0.55
HPS1-206ENST00000462743 LHX6Q9UPM6 363 aa11.61□□□□□ -0.55
HPS1-206ENST00000462743 PCDHGA6Q9Y5G7 932 aa11.61□□□□□ -0.55
HPS1-206ENST00000462743 ZZEF1O43149 2961 aa11.6□□□□□ -0.55
HPS1-206ENST00000462743 TEX51A0A1B0GUA7 166 aa11.6□□□□□ -0.55
HPS1-206ENST00000462743 E7EQ34 232 aa11.6□□□□□ -0.55
HPS1-206ENST00000462743 CPNE3O75131 537 aaKnown RBP11.6□□□□□ -0.55
HPS1-206ENST00000462743 KRT37O76014 449 aa11.6□□□□□ -0.55
HPS1-206ENST00000462743 ONECUT2O95948 504 aa11.6□□□□□ -0.55
HPS1-206ENST00000462743 NTRK1P04629 796 aa11.6□□□□□ -0.55
HPS1-206ENST00000462743 STMN1P16949 149 aa11.6□□□□□ -0.55
HPS1-206ENST00000462743 CCND1P24385 295 aa11.6□□□□□ -0.55
HPS1-206ENST00000462743 RPA3P35244 121 aaPredicted RBP11.6□□□□□ -0.55
HPS1-206ENST00000462743 SLC26A3P40879 764 aa11.6□□□□□ -0.55
HPS1-206ENST00000462743 ATP6V0D1P61421 351 aa11.6□□□□□ -0.55
HPS1-206ENST00000462743 YBX1P67809 324 aaKnown RBP11.6□□□□□ -0.55
HPS1-206ENST00000462743 ZXDCQ2QGD7 858 aaPredicted RBP11.6□□□□□ -0.55
HPS1-206ENST00000462743 TCTE1Q5JU00 501 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms