RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 LIN7AO14910 233 aaPredicted RBP5.59□□□□□ -1.51
VPS36-202ENST00000462289 PPM1DO15297 605 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 B4GAT1O43505 415 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 BANF1O75531 89 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 RFPL3O75679 317 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 POP7O75817 140 aaKnown RBP5.59□□□□□ -1.51
VPS36-202ENST00000462289 MATN4O95460 622 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 LDOC1O95751 146 aaPredicted RBP5.59□□□□□ -1.51
VPS36-202ENST00000462289 TSPAN12O95859 305 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 SLC4A1P02730 911 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 C9P02748 559 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 TPBGLP0DKB5 382 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 ALPPL2P10696 532 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 RALBP11234 206 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 ERGP11308 486 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 ACP5P13686 325 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 PAMP19021 973 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 CCKBRP32239 447 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 CCR7P32248 378 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 ACTR1BP42025 376 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 SLC1A2P43004 574 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 LMAN1P49257 510 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 DUSP3P51452 185 aaPredicted RBP5.59□□□□□ -1.51
VPS36-202ENST00000462289 NOVA1P51513 510 aaKnown RBP5.59□□□□□ -1.51
VPS36-202ENST00000462289 ACTR1AP61163 376 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 PRAMEP78395 509 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 MRPS25P82663 173 aaKnown RBP5.59□□□□□ -1.51
VPS36-202ENST00000462289 E2F1Q01094 437 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 PLOD1Q02809 727 aaPredicted RBP5.59□□□□□ -1.51
VPS36-202ENST00000462289 CFHR1Q03591 330 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 ILF2Q12905 390 aaKnown RBP5.59□□□□□ -1.51
VPS36-202ENST00000462289 CUL1Q13616 776 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 GRB7Q14451 532 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 NFE2L1Q14494 772 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 CLCA4Q14CN2 919 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 ZNF789Q5FWF6 425 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 N4BP2L1Q5TBK1 243 aaPredicted RBP5.59□□□□□ -1.51
VPS36-202ENST00000462289 MRNIPQ6NTE8 343 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 C8orf74Q6P047 294 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 GUSBP11Q6P575 273 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 TRMT10BQ6PF06 316 aaKnown RBP5.59□□□□□ -1.51
VPS36-202ENST00000462289 TMEM220Q6QAJ8 160 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 CES3Q6UWW8 571 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 NEK10Q6ZWH5 1172 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 SPRED1Q7Z699 444 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 GGNQ86UU5 652 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 TMPRSS12Q86WS5 348 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 DENND6AQ8IWF6 608 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 RBM12BQ8IXT5 1001 aaKnown RBP5.59□□□□□ -1.51
VPS36-202ENST00000462289 SLC22A15Q8IZD6 547 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 UNC5BQ8IZJ1 945 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 CARFQ8N187 725 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 ARL14Q8N4G2 192 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 LILRA3Q8N6C8 439 aaPredicted RBP5.59□□□□□ -1.51
VPS36-202ENST00000462289 GSDMBQ8TAX9 411 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 CALML6Q8TD86 181 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 SLC37A2Q8TED4 501 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 PATE1Q8WXA2 126 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.59□□□□□ -1.51
VPS36-202ENST00000462289 ZNF669Q96BR6 464 aaPredicted RBP5.59□□□□□ -1.51
VPS36-202ENST00000462289 CERS2Q96G23 380 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 RMDN2Q96LZ7 410 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 SPATA25Q9BR10 227 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 CCM2Q9BSQ5 444 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 BDH2Q9BUT1 245 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 EPB41L1Q9H4G0 881 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 FAM96AQ9H5X1 160 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 COG4Q9H9E3 785 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 ARFGAP3Q9NP61 516 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 SMYD2Q9NRG4 433 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 FAM114A2Q9NRY5 505 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 OGFRQ9NZT2 677 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 CPNE7Q9UBL6 633 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 EPHA6Q9UF33 1036 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 CRLS1Q9UJA2 301 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 FBXO5Q9UKT4 447 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 CORO1CQ9ULV4 474 aaPredicted RBP5.59□□□□□ -1.51
VPS36-202ENST00000462289 PADI4Q9UM07 663 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 PCDHB10Q9UN67 800 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 KCNK6Q9Y257 313 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 UTP11Q9Y3A2 253 aaKnown RBP5.59□□□□□ -1.51
VPS36-202ENST00000462289 PRKAB1Q9Y478 270 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 PCDHB1Q9Y5F3 818 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 COMMD10Q9Y6G5 202 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 RNF215Q9Y6U7 377 aa5.59□□□□□ -1.51
VPS36-202ENST00000462289 DSPP15924 2871 aaKnown RBP5.58□□□□□ -1.52
VPS36-202ENST00000462289 URB1O60287 2271 aaKnown RBP5.58□□□□□ -1.52
VPS36-202ENST00000462289 IGHV1OR21-1A0A087WYE8 117 aa5.58□□□□□ -1.52
VPS36-202ENST00000462289 SPAARA0A1B0GVQ0 90 aa5.58□□□□□ -1.52
VPS36-202ENST00000462289 A0A1W2PNU3 283 aaPredicted RBP5.58□□□□□ -1.52
VPS36-202ENST00000462289 TCRBV9S1A1TA0A576 114 aa5.58□□□□□ -1.52
VPS36-202ENST00000462289 ESYT3A0FGR9 886 aa5.58□□□□□ -1.52
VPS36-202ENST00000462289 CCDC78A2IDD5 438 aa5.58□□□□□ -1.52
VPS36-202ENST00000462289 OR2AG2A6NM03 316 aa5.58□□□□□ -1.52
VPS36-202ENST00000462289 D6RAR5 112 aa5.58□□□□□ -1.52
VPS36-202ENST00000462289 CASC3O15234 703 aaKnown RBP5.58□□□□□ -1.52
VPS36-202ENST00000462289 FFAR2O15552 330 aa5.58□□□□□ -1.52
VPS36-202ENST00000462289 OPA1O60313 960 aa5.58□□□□□ -1.52
VPS36-202ENST00000462289 SPAG6O75602 509 aa5.58□□□□□ -1.52
VPS36-202ENST00000462289 FAM155BO75949 473 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms