RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 NDUFAF7Q7L592 441 aa10.36□□□□□ -0.75
CBX3-205ENST00000462165 CDKL3Q8IVW4 592 aaPredicted RBP10.36□□□□□ -0.75
CBX3-205ENST00000462165 ZNF295-AS1Q8N0V1 137 aa10.36□□□□□ -0.75
CBX3-205ENST00000462165 DTWD1Q8N5C7 304 aa10.36□□□□□ -0.75
CBX3-205ENST00000462165 METTL27Q8N6F8 245 aaPredicted RBP10.36□□□□□ -0.75
CBX3-205ENST00000462165 ACTL9Q8TC94 416 aa10.36□□□□□ -0.75
CBX3-205ENST00000462165 BRIX1Q8TDN6 353 aaKnown RBP10.36□□□□□ -0.75
CBX3-205ENST00000462165 ZUFSPQ96AP4 578 aa10.36□□□□□ -0.75
CBX3-205ENST00000462165 MIEF2Q96C03 454 aa10.36□□□□□ -0.75
CBX3-205ENST00000462165 C8orf44Q96CB5 159 aa10.36□□□□□ -0.75
CBX3-205ENST00000462165 CCDC42Q96M95 316 aa10.36□□□□□ -0.75
CBX3-205ENST00000462165 SPATA13Q96N96 652 aa10.36□□□□□ -0.75
CBX3-205ENST00000462165 NHEJ1Q9H9Q4 299 aaPredicted RBP10.36□□□□□ -0.75
CBX3-205ENST00000462165 ZNF304Q9HCX3 659 aa10.36□□□□□ -0.75
CBX3-205ENST00000462165 ZNHIT6Q9NWK9 470 aaKnown RBP10.36□□□□□ -0.75
CBX3-205ENST00000462165 SEC14L3Q9UDX4 400 aa10.36□□□□□ -0.75
CBX3-205ENST00000462165 C3orf18Q9UK00 162 aa10.36□□□□□ -0.75
CBX3-205ENST00000462165 MRPS2Q9Y399 296 aaKnown RBP10.36□□□□□ -0.75
CBX3-205ENST00000462165 MAU2Q9Y6X3 613 aa10.36□□□□□ -0.75
CBX3-205ENST00000462165 IGLV3-12A0A075B6K2 115 aa10.35□□□□□ -0.75
CBX3-205ENST00000462165 PRICKLE3O43900 615 aaPredicted RBP10.35□□□□□ -0.75
CBX3-205ENST00000462165 STK10O94804 968 aaKnown RBP10.35□□□□□ -0.75
CBX3-205ENST00000462165 RASAL1O95294 804 aa10.35□□□□□ -0.75
CBX3-205ENST00000462165 BMP10O95393 424 aa10.35□□□□□ -0.75
CBX3-205ENST00000462165 MED26O95402 600 aa10.35□□□□□ -0.75
CBX3-205ENST00000462165 CRYABP02511 175 aaKnown RBP10.35□□□□□ -0.75
CBX3-205ENST00000462165 SERPINA7P05543 415 aa10.35□□□□□ -0.75
CBX3-205ENST00000462165 RBP3P10745 1247 aa10.35□□□□□ -0.75
CBX3-205ENST00000462165 MSNP26038 577 aaKnown RBP10.35□□□□□ -0.75
CBX3-205ENST00000462165 MST1P26927 711 aa10.35□□□□□ -0.75
CBX3-205ENST00000462165 SSTR2P30874 369 aa10.35□□□□□ -0.75
CBX3-205ENST00000462165 FOXN2P32314 431 aa10.35□□□□□ -0.75
CBX3-205ENST00000462165 RBPJQ06330 500 aa10.35□□□□□ -0.75
CBX3-205ENST00000462165 TRIM14Q14142 442 aa10.35□□□□□ -0.75
CBX3-205ENST00000462165 GRB7Q14451 532 aa10.35□□□□□ -0.75
CBX3-205ENST00000462165 SF1Q15637 639 aaKnown RBP10.35□□□□□ -0.75
CBX3-205ENST00000462165 WASHC2DQ5SRD0 308 aa10.35□□□□□ -0.75
CBX3-205ENST00000462165 CCDC181Q5TID7 509 aa10.35□□□□□ -0.75
CBX3-205ENST00000462165 KCTD11Q693B1 232 aa10.35□□□□□ -0.75
CBX3-205ENST00000462165 CAVIN1Q6NZI2 390 aaKnown RBP10.35□□□□□ -0.75
CBX3-205ENST00000462165 PRMT9Q6P2P2 845 aa10.35□□□□□ -0.75
CBX3-205ENST00000462165 SPNS3Q6ZMD2 512 aa10.35□□□□□ -0.75
CBX3-205ENST00000462165 RIPOR1Q6ZS17 1223 aa10.35□□□□□ -0.75
CBX3-205ENST00000462165 TAX1BP1Q86VP1 789 aa10.35□□□□□ -0.75
CBX3-205ENST00000462165 DCUN1D3Q8IWE4 304 aa10.35□□□□□ -0.75
CBX3-205ENST00000462165 SLC22A15Q8IZD6 547 aa10.35□□□□□ -0.75
CBX3-205ENST00000462165 C2orf73Q8N5S3 287 aaPredicted RBP10.35□□□□□ -0.75
CBX3-205ENST00000462165 SIRT6Q8N6T7 355 aa10.35□□□□□ -0.75
CBX3-205ENST00000462165 OR2L8Q8NGY9 312 aa10.35□□□□□ -0.75
CBX3-205ENST00000462165 RNF32Q9H0A6 362 aa10.35□□□□□ -0.75
CBX3-205ENST00000462165 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.35□□□□□ -0.75
CBX3-205ENST00000462165 GOLPH3Q9H4A6 298 aa10.35□□□□□ -0.75
CBX3-205ENST00000462165 ABHD10Q9NUJ1 306 aa10.35□□□□□ -0.75
CBX3-205ENST00000462165 IMPACTQ9P2X3 320 aa10.35□□□□□ -0.75
CBX3-205ENST00000462165 ZNF282Q9UDV7 671 aaPredicted RBP10.35□□□□□ -0.75
CBX3-205ENST00000462165 EFR3BQ9Y2G0 817 aa10.35□□□□□ -0.75
CBX3-205ENST00000462165 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.35□□□□□ -0.75
CBX3-205ENST00000462165 KLK4Q9Y5K2 254 aa10.35□□□□□ -0.75
CBX3-205ENST00000462165 SCN2AQ99250 2005 aa10.34□□□□□ -0.75
CBX3-205ENST00000462165 IGHV1-45A0A0A0MS14 117 aa10.34□□□□□ -0.75
CBX3-205ENST00000462165 HYKKA2RU49 373 aa10.34□□□□□ -0.75
CBX3-205ENST00000462165 MROH6A6NGR9 719 aa10.34□□□□□ -0.75
CBX3-205ENST00000462165 F8W8V4 182 aa10.34□□□□□ -0.75
CBX3-205ENST00000462165 GOLGA6L19H0YKK7 550 aa10.34□□□□□ -0.75
CBX3-205ENST00000462165 RASGRF2O14827 1237 aa10.34□□□□□ -0.75
CBX3-205ENST00000462165 CTSVO60911 334 aa10.34□□□□□ -0.75
CBX3-205ENST00000462165 GPC4O75487 556 aa10.34□□□□□ -0.75
CBX3-205ENST00000462165 WDPCPO95876 746 aa10.34□□□□□ -0.75
CBX3-205ENST00000462165 RPN2P04844 631 aa10.34□□□□□ -0.75
CBX3-205ENST00000462165 TPM3P06753 285 aa10.34□□□□□ -0.75
CBX3-205ENST00000462165 TPH1P17752 444 aa10.34□□□□□ -0.75
CBX3-205ENST00000462165 CCR7P32248 378 aa10.34□□□□□ -0.75
CBX3-205ENST00000462165 VSX2P58304 361 aaPredicted RBP10.34□□□□□ -0.75
CBX3-205ENST00000462165 EIF3EP60228 445 aaKnown RBP10.34□□□□□ -0.75
CBX3-205ENST00000462165 COPS2P61201 443 aa10.34□□□□□ -0.75
CBX3-205ENST00000462165 ADORA2A-AS1P86434 159 aa10.34□□□□□ -0.75
CBX3-205ENST00000462165 POU6F1Q14863 301 aa10.34□□□□□ -0.75
CBX3-205ENST00000462165 FRMPD2BQ6IN97 320 aa10.34□□□□□ -0.75
CBX3-205ENST00000462165 CNSTQ6PJW8 725 aa10.34□□□□□ -0.75
CBX3-205ENST00000462165 UNC5DQ6UXZ4 953 aa10.34□□□□□ -0.75
CBX3-205ENST00000462165 LAPTM4BQ86VI4 370 aa10.34□□□□□ -0.75
CBX3-205ENST00000462165 VRK3Q8IV63 474 aa10.34□□□□□ -0.75
CBX3-205ENST00000462165 PRSS58Q8IYP2 241 aa10.34□□□□□ -0.75
CBX3-205ENST00000462165 LMNTD1Q8N9Z9 388 aa10.34□□□□□ -0.75
CBX3-205ENST00000462165 KRT35Q92764 455 aa10.34□□□□□ -0.75
CBX3-205ENST00000462165 IL17FQ96PD4 163 aa10.34□□□□□ -0.75
CBX3-205ENST00000462165 RIC8BQ9NVN3 520 aa10.34□□□□□ -0.75
CBX3-205ENST00000462165 CIDEBQ9UHD4 219 aa10.34□□□□□ -0.75
CBX3-205ENST00000462165 SH3BGRL2Q9UJC5 107 aa10.34□□□□□ -0.75
CBX3-205ENST00000462165 FAM169AQ9Y6X4 670 aa10.34□□□□□ -0.75
CBX3-205ENST00000462165 ITPR3Q14573 2671 aa10.34□□□□□ -0.75
CBX3-205ENST00000462165 HEATR5BQ9P2D3 2071 aa10.34□□□□□ -0.75
CBX3-205ENST00000462165 GTF3C1Q12789 2109 aa10.33□□□□□ -0.76
CBX3-205ENST00000462165 MACROD2A1Z1Q3 448 aa10.33□□□□□ -0.76
CBX3-205ENST00000462165 OR51F1A6NGY5 319 aa10.33□□□□□ -0.76
CBX3-205ENST00000462165 IDSB3KWA1 339 aa10.33□□□□□ -0.76
CBX3-205ENST00000462165 PJA2O43164 708 aa10.33□□□□□ -0.76
CBX3-205ENST00000462165 OR1I1O60431 355 aa10.33□□□□□ -0.76
CBX3-205ENST00000462165 ZNF189O75820 626 aaPredicted RBP10.33□□□□□ -0.76
CBX3-205ENST00000462165 WFS1O76024 890 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms