RNA–Protein interactions for RNA: ENST00000461974.1

FN1-215, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-215ENST00000461974 SPATA33Q96N06 139 aa3.63□□□□□ -1.83
FN1-215ENST00000461974 CPVLQ9H3G5 476 aa3.63□□□□□ -1.83
FN1-215ENST00000461974 LMAN1LQ9HAT1 526 aa3.63□□□□□ -1.83
FN1-215ENST00000461974 GSN-AS1Q9NRJ2 163 aa3.63□□□□□ -1.83
FN1-215ENST00000461974 CHCHD3Q9NX63 227 aaKnown RBP3.63□□□□□ -1.83
FN1-215ENST00000461974 ZNF624Q9P2J8 865 aaPredicted RBP3.63□□□□□ -1.83
FN1-215ENST00000461974 TXNDC16Q9P2K2 825 aa3.63□□□□□ -1.83
FN1-215ENST00000461974 LEF1Q9UJU2 399 aaPredicted RBP3.63□□□□□ -1.83
FN1-215ENST00000461974 ICAM5Q9UMF0 924 aa3.63□□□□□ -1.83
FN1-215ENST00000461974 TCF19Q9Y242 345 aa3.63□□□□□ -1.83
FN1-215ENST00000461974 WDR83OSQ9Y284 106 aa3.63□□□□□ -1.83
FN1-215ENST00000461974 LRP12Q9Y561 859 aa3.63□□□□□ -1.83
FN1-215ENST00000461974 ABCA10Q8WWZ4 1543 aa3.63□□□□□ -1.83
FN1-215ENST00000461974 ADAMTS12P58397 1594 aa3.63□□□□□ -1.83
FN1-215ENST00000461974 PRG4Q92954 1404 aaPredicted RBP3.62□□□□□ -1.83
FN1-215ENST00000461974 PTPRMP28827 1452 aa3.62□□□□□ -1.83
FN1-215ENST00000461974 ARHGEF37A1IGU5 675 aa3.62□□□□□ -1.83
FN1-215ENST00000461974 C5orf52A6NGY3 159 aa3.62□□□□□ -1.83
FN1-215ENST00000461974 CASTOR2A6NHX0 329 aa3.62□□□□□ -1.83
FN1-215ENST00000461974 C2orf81A6NN90 581 aa3.62□□□□□ -1.83
FN1-215ENST00000461974 DIAPH2O60879 1101 aa3.62□□□□□ -1.83
FN1-215ENST00000461974 ATP6AP2O75787 350 aa3.62□□□□□ -1.83
FN1-215ENST00000461974 LUC7L3O95232 432 aaKnown RBP3.62□□□□□ -1.83
FN1-215ENST00000461974 CLPTM1O96005 669 aa3.62□□□□□ -1.83
FN1-215ENST00000461974 IGLV2-11P01706 119 aa3.62□□□□□ -1.83
FN1-215ENST00000461974 GBAP04062 536 aa3.62□□□□□ -1.83
FN1-215ENST00000461974 UMODP07911 640 aa3.62□□□□□ -1.83
FN1-215ENST00000461974 SMIM18P0DKX4 95 aa3.62□□□□□ -1.83
FN1-215ENST00000461974 PDGFRAP16234 1089 aa3.62□□□□□ -1.83
FN1-215ENST00000461974 TIA1P31483 386 aaKnown RBP eCLIP3.62□□□□□ -1.832e-8■□□□□ 9.4
FN1-215ENST00000461974 TCF7P36402 384 aaPredicted RBP3.62□□□□□ -1.83
FN1-215ENST00000461974 RGS7P49802 495 aa3.62□□□□□ -1.83
FN1-215ENST00000461974 VAMP7P51809 220 aa3.62□□□□□ -1.83
FN1-215ENST00000461974 MFAP3P55082 362 aa3.62□□□□□ -1.83
FN1-215ENST00000461974 B3GALT5-AS1P59052 145 aa3.62□□□□□ -1.83
FN1-215ENST00000461974 MZT1Q08AG7 82 aa3.62□□□□□ -1.83
FN1-215ENST00000461974 DMPKQ09013 629 aa3.62□□□□□ -1.83
FN1-215ENST00000461974 GPR17Q13304 367 aa3.62□□□□□ -1.83
FN1-215ENST00000461974 TYSND1Q2T9J0 566 aa3.62□□□□□ -1.83
FN1-215ENST00000461974 XKR6Q5GH73 641 aa3.62□□□□□ -1.83
FN1-215ENST00000461974 DCAF10Q5QP82 559 aa3.62□□□□□ -1.83
FN1-215ENST00000461974 RUSC1-AS1Q66K80 236 aa3.62□□□□□ -1.83
FN1-215ENST00000461974 TXNRD3NBQ6F5E7 133 aa3.62□□□□□ -1.83
FN1-215ENST00000461974 CAVIN1Q6NZI2 390 aaKnown RBP3.62□□□□□ -1.83
FN1-215ENST00000461974 IL17RELQ6ZVW7 336 aa3.62□□□□□ -1.83
FN1-215ENST00000461974 MARK2Q7KZI7 788 aaKnown RBP3.62□□□□□ -1.83
FN1-215ENST00000461974 TRMT1LQ7Z2T5 733 aaKnown RBP3.62□□□□□ -1.83
FN1-215ENST00000461974 TMEM139Q8IV31 216 aa3.62□□□□□ -1.83
FN1-215ENST00000461974 MMD2Q8IY49 270 aa3.62□□□□□ -1.83
FN1-215ENST00000461974 TRIM58Q8NG06 486 aa3.62□□□□□ -1.83
FN1-215ENST00000461974 OR11H4Q8NGC9 324 aa3.62□□□□□ -1.83
FN1-215ENST00000461974 OR4K1Q8NGD4 311 aa3.62□□□□□ -1.83
FN1-215ENST00000461974 VANGL1Q8TAA9 524 aaPredicted RBP3.62□□□□□ -1.83
FN1-215ENST00000461974 OLIG1Q8TAK6 271 aa3.62□□□□□ -1.83
FN1-215ENST00000461974 SEPT1Q8WYJ6 367 aa3.62□□□□□ -1.83
FN1-215ENST00000461974 CORO2AQ92828 525 aa3.62□□□□□ -1.83
FN1-215ENST00000461974 MR1Q95460 341 aa3.62□□□□□ -1.83
FN1-215ENST00000461974 NSL1Q96IY1 281 aa3.62□□□□□ -1.83
FN1-215ENST00000461974 ZNF354BQ96LW1 612 aa3.62□□□□□ -1.83
FN1-215ENST00000461974 FAM20AQ96MK3 541 aa3.62□□□□□ -1.83
FN1-215ENST00000461974 RHNO1Q9BSD3 238 aa3.62□□□□□ -1.83
FN1-215ENST00000461974 THUMPD3Q9BV44 507 aaKnown RBP3.62□□□□□ -1.83
FN1-215ENST00000461974 KATNB1Q9BVA0 655 aa3.62□□□□□ -1.83
FN1-215ENST00000461974 ARGLU1Q9NWB6 273 aaPredicted RBP3.62□□□□□ -1.83
FN1-215ENST00000461974 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.62□□□□□ -1.83
FN1-215ENST00000461974 GRID1Q9ULK0 1009 aa3.62□□□□□ -1.83
FN1-215ENST00000461974 NOL7Q9UMY1 257 aaKnown RBP3.62□□□□□ -1.83
FN1-215ENST00000461974 KIAA1217Q5T5P2 1943 aa3.62□□□□□ -1.83
FN1-215ENST00000461974 CUX1P39880 1505 aa3.61□□□□□ -1.83
FN1-215ENST00000461974 KIAA0586Q9BVV6 1533 aa3.61□□□□□ -1.83
FN1-215ENST00000461974 DUXAA6NLW8 204 aa3.61□□□□□ -1.83
FN1-215ENST00000461974 PCDH7O60245 1069 aa3.61□□□□□ -1.83
FN1-215ENST00000461974 SLC22A3O75751 556 aa3.61□□□□□ -1.83
FN1-215ENST00000461974 DFFBO76075 338 aa3.61□□□□□ -1.83
FN1-215ENST00000461974 NADKO95544 446 aaPredicted RBP3.61□□□□□ -1.83
FN1-215ENST00000461974 C9P02748 559 aa3.61□□□□□ -1.83
FN1-215ENST00000461974 VIMP08670 466 aaKnown RBP3.61□□□□□ -1.83
FN1-215ENST00000461974 FAM58BPP0C7Q3 252 aa3.61□□□□□ -1.83
FN1-215ENST00000461974 FRMD6-AS1P0C7T7 363 aa3.61□□□□□ -1.83
FN1-215ENST00000461974 ERVK-10P10266 1014 aa3.61□□□□□ -1.83
FN1-215ENST00000461974 MYL6BP14649 208 aa3.61□□□□□ -1.83
FN1-215ENST00000461974 CTNNA1P35221 906 aaKnown RBP3.61□□□□□ -1.83
FN1-215ENST00000461974 CDH11P55287 796 aa3.61□□□□□ -1.83
FN1-215ENST00000461974 UBASH3AP57075 661 aa3.61□□□□□ -1.83
FN1-215ENST00000461974 TUBB4BP68371 445 aa3.61□□□□□ -1.83
FN1-215ENST00000461974 VEZF1Q14119 521 aa3.61□□□□□ -1.83
FN1-215ENST00000461974 PTGISQ16647 500 aa3.61□□□□□ -1.83
FN1-215ENST00000461974 ZRANB3Q5FWF4 1079 aa3.61□□□□□ -1.83
FN1-215ENST00000461974 MPP7Q5T2T1 576 aa3.61□□□□□ -1.83
FN1-215ENST00000461974 RBMS3Q6XE24 437 aaKnown RBP3.61□□□□□ -1.83
FN1-215ENST00000461974 MFSD6Q6ZSS7 791 aa3.61□□□□□ -1.83
FN1-215ENST00000461974 C4orf19Q8IY42 314 aa3.61□□□□□ -1.83
FN1-215ENST00000461974 GRAPLQ8TC17 118 aaPredicted RBP3.61□□□□□ -1.83
FN1-215ENST00000461974 PROX1Q92786 737 aa3.61□□□□□ -1.83
FN1-215ENST00000461974 MAP3K3Q99759 626 aa3.61□□□□□ -1.83
FN1-215ENST00000461974 TRAF4Q9BUZ4 470 aaPredicted RBP3.61□□□□□ -1.83
FN1-215ENST00000461974 KRTAP1-5Q9BYS1 174 aa3.61□□□□□ -1.83
FN1-215ENST00000461974 PRRG4Q9BZD6 226 aa3.61□□□□□ -1.83
FN1-215ENST00000461974 ACTL8Q9H568 366 aa3.61□□□□□ -1.83
FN1-215ENST00000461974 XAB2Q9HCS7 855 aaKnown RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms