RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-208ENST00000461578 SF1Q15637 639 aaKnown RBP13.11□□□□□ -0.31
PABPC4-208ENST00000461578 ANKRD20A2Q5SQ80 823 aa13.11□□□□□ -0.31
PABPC4-208ENST00000461578 ANKRD20A1Q5TYW2 823 aa13.11□□□□□ -0.31
PABPC4-208ENST00000461578 ANKRD20A3Q5VUR7 823 aa13.11□□□□□ -0.31
PABPC4-208ENST00000461578 FRMPD2BQ6IN97 320 aa13.11□□□□□ -0.31
PABPC4-208ENST00000461578 DENND5AQ6IQ26 1287 aa13.11□□□□□ -0.31
PABPC4-208ENST00000461578 MAGED4Q96JG8 741 aa13.11□□□□□ -0.31
PABPC4-208ENST00000461578 YIPF2Q9BWQ6 316 aa13.11□□□□□ -0.31
PABPC4-208ENST00000461578 HEMGNQ9BXL5 484 aa13.11□□□□□ -0.31
PABPC4-208ENST00000461578 LUC7LQ9NQ29 371 aaKnown RBP13.11□□□□□ -0.31
PABPC4-208ENST00000461578 SPTLC3Q9NUV7 552 aa13.11□□□□□ -0.31
PABPC4-208ENST00000461578 ZC3H7BQ9UGR2 993 aaKnown RBP13.11□□□□□ -0.31
PABPC4-208ENST00000461578 AAR2Q9Y312 384 aaKnown RBP13.11□□□□□ -0.31
PABPC4-208ENST00000461578 A0A0J9YVX5 310 aa13.1□□□□□ -0.31
PABPC4-208ENST00000461578 MACROD2A1Z1Q3 448 aa13.1□□□□□ -0.31
PABPC4-208ENST00000461578 FITM1A5D6W6 292 aa13.1□□□□□ -0.31
PABPC4-208ENST00000461578 OR51F1A6NGY5 319 aa13.1□□□□□ -0.31
PABPC4-208ENST00000461578 NRP2O60462 931 aa13.1□□□□□ -0.31
PABPC4-208ENST00000461578 PRAMEF2O60811 474 aa13.1□□□□□ -0.31
PABPC4-208ENST00000461578 AGAP20933 346 aa13.1□□□□□ -0.31
PABPC4-208ENST00000461578 CD9P21926 228 aa13.1□□□□□ -0.31
PABPC4-208ENST00000461578 FBLP22087 321 aaKnown RBP13.1□□□□□ -0.31
PABPC4-208ENST00000461578 FDXRP22570 491 aa13.1□□□□□ -0.31
PABPC4-208ENST00000461578 CXCR2P25025 360 aa13.1□□□□□ -0.31
PABPC4-208ENST00000461578 EMP2P54851 167 aa13.1□□□□□ -0.31
PABPC4-208ENST00000461578 ASTE1Q2TB18 679 aaPredicted RBP13.1□□□□□ -0.31
PABPC4-208ENST00000461578 RHOT2Q8IXI1 618 aa13.1□□□□□ -0.31
PABPC4-208ENST00000461578 ADAMTS18Q8TE60 1221 aa13.1□□□□□ -0.31
PABPC4-208ENST00000461578 SLC22A18Q96BI1 424 aa13.1□□□□□ -0.31
PABPC4-208ENST00000461578 IQCDQ96DY2 449 aa13.1□□□□□ -0.31
PABPC4-208ENST00000461578 C14orf79Q96F83 325 aa13.1□□□□□ -0.31
PABPC4-208ENST00000461578 CDKN2AIPNLQ96HQ2 116 aa13.1□□□□□ -0.31
PABPC4-208ENST00000461578 ZNF285Q96NJ3 590 aa13.1□□□□□ -0.31
PABPC4-208ENST00000461578 ANP32EQ9BTT0 268 aa13.1□□□□□ -0.31
PABPC4-208ENST00000461578 MENTQ9BUN1 341 aa13.1□□□□□ -0.31
PABPC4-208ENST00000461578 TSPAN10Q9H1Z9 355 aaPredicted RBP13.1□□□□□ -0.31
PABPC4-208ENST00000461578 GOLPH3Q9H4A6 298 aa13.1□□□□□ -0.31
PABPC4-208ENST00000461578 NLE1Q9NVX2 485 aaPredicted RBP13.1□□□□□ -0.31
PABPC4-208ENST00000461578 PIH1D1Q9NWS0 290 aaKnown RBP13.1□□□□□ -0.31
PABPC4-208ENST00000461578 LOC105369274A0A096LPK9 316 aa13.09□□□□□ -0.31
PABPC4-208ENST00000461578 IGHV1-45A0A0A0MS14 117 aa13.09□□□□□ -0.31
PABPC4-208ENST00000461578 LOC102723532A0A0G2JNH3 316 aa13.09□□□□□ -0.31
PABPC4-208ENST00000461578 OR5H15A6NDH6 313 aa13.09□□□□□ -0.31
PABPC4-208ENST00000461578 IDSB3KWA1 339 aa13.09□□□□□ -0.31
PABPC4-208ENST00000461578 H7C0S8 307 aa13.09□□□□□ -0.31
PABPC4-208ENST00000461578 QSOX1O00391 747 aa13.09□□□□□ -0.31
PABPC4-208ENST00000461578 ZNHIT1O43257 154 aa13.09□□□□□ -0.31
PABPC4-208ENST00000461578 PSTPIP1O43586 416 aa13.09□□□□□ -0.31
PABPC4-208ENST00000461578 S1PR4O95977 384 aa13.09□□□□□ -0.31
PABPC4-208ENST00000461578 PSMB5P28074 263 aa13.09□□□□□ -0.31
PABPC4-208ENST00000461578 MARCKSL1P49006 195 aa13.09□□□□□ -0.31
PABPC4-208ENST00000461578 ST13P50502 369 aaKnown RBP13.09□□□□□ -0.31
PABPC4-208ENST00000461578 ZNF33BQ06732 778 aa13.09□□□□□ -0.31
PABPC4-208ENST00000461578 POU6F1Q14863 301 aa13.09□□□□□ -0.31
PABPC4-208ENST00000461578 DNAJC21Q5F1R6 531 aaKnown RBP13.09□□□□□ -0.31
PABPC4-208ENST00000461578 CCDC181Q5TID7 509 aa13.09□□□□□ -0.31
PABPC4-208ENST00000461578 ABHD17BQ5VST6 288 aa13.09□□□□□ -0.31
PABPC4-208ENST00000461578 NEK10Q6ZWH5 1172 aa13.09□□□□□ -0.31
PABPC4-208ENST00000461578 VRK3Q8IV63 474 aa13.09□□□□□ -0.31
PABPC4-208ENST00000461578 OR4N4Q8N0Y3 316 aa13.09□□□□□ -0.31
PABPC4-208ENST00000461578 OR2L8Q8NGY9 312 aa13.09□□□□□ -0.31
PABPC4-208ENST00000461578 FAM118BQ9BPY3 351 aa13.09□□□□□ -0.31
PABPC4-208ENST00000461578 MCCC2Q9HCC0 563 aa13.09□□□□□ -0.31
PABPC4-208ENST00000461578 RIC8BQ9NVN3 520 aa13.09□□□□□ -0.31
PABPC4-208ENST00000461578 SLC39A10Q9ULF5 831 aa13.09□□□□□ -0.31
PABPC4-208ENST00000461578 MEMO1Q9Y316 297 aa13.09□□□□□ -0.31
PABPC4-208ENST00000461578 FAM169AQ9Y6X4 670 aa13.09□□□□□ -0.31
PABPC4-208ENST00000461578 OR1I1O60431 355 aa13.08□□□□□ -0.32
PABPC4-208ENST00000461578 ZRANB2O95218 330 aaKnown RBP eCLIP13.08□□□□□ -0.322e-10■■■□□ 14.9
PABPC4-208ENST00000461578 HEXBP07686 556 aa13.08□□□□□ -0.32
PABPC4-208ENST00000461578 OR56A5P0C7T3 313 aa13.08□□□□□ -0.32
PABPC4-208ENST00000461578 MSNP26038 577 aaKnown RBP13.08□□□□□ -0.32
PABPC4-208ENST00000461578 CSNK1G2P78368 415 aa13.08□□□□□ -0.32
PABPC4-208ENST00000461578 PLOD1Q02809 727 aaPredicted RBP13.08□□□□□ -0.32
PABPC4-208ENST00000461578 HSPA14Q0VDF9 509 aa13.08□□□□□ -0.32
PABPC4-208ENST00000461578 GRB7Q14451 532 aa13.08□□□□□ -0.32
PABPC4-208ENST00000461578 ITIH4Q14624 930 aa13.08□□□□□ -0.32
PABPC4-208ENST00000461578 ZNF766Q5HY98 468 aa13.08□□□□□ -0.32
PABPC4-208ENST00000461578 PRMT9Q6P2P2 845 aa13.08□□□□□ -0.32
PABPC4-208ENST00000461578 MEX3BQ6ZN04 569 aaKnown RBP13.08□□□□□ -0.32
PABPC4-208ENST00000461578 RIPOR1Q6ZS17 1223 aa13.08□□□□□ -0.32
PABPC4-208ENST00000461578 LUZP1Q86V48 1076 aa13.08□□□□□ -0.32
PABPC4-208ENST00000461578 DCUN1D3Q8IWE4 304 aa13.08□□□□□ -0.32
PABPC4-208ENST00000461578 GBP4Q96PP9 640 aa13.08□□□□□ -0.32
PABPC4-208ENST00000461578 MIPEPQ99797 713 aa13.08□□□□□ -0.32
PABPC4-208ENST00000461578 C19orf43Q9BQ61 176 aa13.08□□□□□ -0.32
PABPC4-208ENST00000461578 FERMT1Q9BQL6 677 aa13.08□□□□□ -0.32
PABPC4-208ENST00000461578 RNF32Q9H0A6 362 aa13.08□□□□□ -0.32
PABPC4-208ENST00000461578 GPAMQ9HCL2 828 aa13.08□□□□□ -0.32
PABPC4-208ENST00000461578 STMN3Q9NZ72 180 aa13.08□□□□□ -0.32
PABPC4-208ENST00000461578 TRPC4Q9UBN4 977 aa13.08□□□□□ -0.32
PABPC4-208ENST00000461578 IGLV3-12A0A075B6K2 115 aa13.07□□□□□ -0.32
PABPC4-208ENST00000461578 KRT87PA6NCN2 255 aa13.07□□□□□ -0.32
PABPC4-208ENST00000461578 APOC4-APOC2K7ER74 178 aa13.07□□□□□ -0.32
PABPC4-208ENST00000461578 RASGRF2O14827 1237 aa13.07□□□□□ -0.32
PABPC4-208ENST00000461578 SRPX2O60687 465 aaPredicted RBP13.07□□□□□ -0.32
PABPC4-208ENST00000461578 APOC2P02655 101 aa13.07□□□□□ -0.32
PABPC4-208ENST00000461578 MYBL2P10244 700 aa13.07□□□□□ -0.32
PABPC4-208ENST00000461578 ERVK-10P10266 1014 aa13.07□□□□□ -0.32
PABPC4-208ENST00000461578 CD1EP15812 388 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms