RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 TSPAN17Q96FV3 270 aa12.78□□□□□ -0.36
RAB11FIP3-207ENST00000461009 CYTH2Q99418 400 aa12.78□□□□□ -0.36
RAB11FIP3-207ENST00000461009 GPR87Q9BY21 358 aa12.78□□□□□ -0.36
RAB11FIP3-207ENST00000461009 TRIM54Q9BYV2 358 aa12.78□□□□□ -0.36
RAB11FIP3-207ENST00000461009 SYTL2Q9HCH5 934 aa12.78□□□□□ -0.36
RAB11FIP3-207ENST00000461009 LHX9Q9NQ69 397 aa12.78□□□□□ -0.36
RAB11FIP3-207ENST00000461009 SMYD2Q9NRG4 433 aa12.78□□□□□ -0.36
RAB11FIP3-207ENST00000461009 IL17BQ9UHF5 180 aa12.78□□□□□ -0.36
RAB11FIP3-207ENST00000461009 PLAGL1Q9UM63 463 aa12.78□□□□□ -0.36
RAB11FIP3-207ENST00000461009 NFU1Q9UMS0 254 aa12.78□□□□□ -0.36
RAB11FIP3-207ENST00000461009 RUVBL2Q9Y230 463 aaKnown RBP12.78□□□□□ -0.36
RAB11FIP3-207ENST00000461009 KALRNO60229 2985 aa12.78□□□□□ -0.36
RAB11FIP3-207ENST00000461009 ARHGEF33A8MVX0 844 aa12.77□□□□□ -0.37
RAB11FIP3-207ENST00000461009 GFYI3L273 518 aa12.77□□□□□ -0.37
RAB11FIP3-207ENST00000461009 SLC16A5O15375 505 aa12.77□□□□□ -0.37
RAB11FIP3-207ENST00000461009 CPNE3O75131 537 aaKnown RBP12.77□□□□□ -0.37
RAB11FIP3-207ENST00000461009 RECKO95980 971 aa12.77□□□□□ -0.37
RAB11FIP3-207ENST00000461009 HIST1H2AGP0C0S8 130 aaPredicted RBP12.77□□□□□ -0.37
RAB11FIP3-207ENST00000461009 EBLN1P0CF75 366 aa12.77□□□□□ -0.37
RAB11FIP3-207ENST00000461009 TPBGLP0DKB5 382 aa12.77□□□□□ -0.37
RAB11FIP3-207ENST00000461009 HIST1H2ADP20671 130 aa12.77□□□□□ -0.37
RAB11FIP3-207ENST00000461009 CYP2A7P20853 494 aa12.77□□□□□ -0.37
RAB11FIP3-207ENST00000461009 TIAL1Q01085 375 aaKnown RBP eCLIP12.77□□□□□ -0.37
RAB11FIP3-207ENST00000461009 ERV3-1Q14264 604 aa12.77□□□□□ -0.37
RAB11FIP3-207ENST00000461009 KCNAB1Q14722 419 aa12.77□□□□□ -0.37
RAB11FIP3-207ENST00000461009 SLC5A12Q1EHB4 618 aa12.77□□□□□ -0.37
RAB11FIP3-207ENST00000461009 TEX35Q5T0J7 233 aa12.77□□□□□ -0.37
RAB11FIP3-207ENST00000461009 PWWP2BQ6NUJ5 590 aa12.77□□□□□ -0.37
RAB11FIP3-207ENST00000461009 UBE2R2Q712K3 238 aaPredicted RBP12.77□□□□□ -0.37
RAB11FIP3-207ENST00000461009 PIWIL4Q7Z3Z4 852 aaKnown RBP12.77□□□□□ -0.37
RAB11FIP3-207ENST00000461009 EIF1ADQ8N9N8 165 aaKnown RBP12.77□□□□□ -0.37
RAB11FIP3-207ENST00000461009 C9orf43Q8TAL5 461 aaPredicted RBP12.77□□□□□ -0.37
RAB11FIP3-207ENST00000461009 LINGO1Q96FE5 620 aa12.77□□□□□ -0.37
RAB11FIP3-207ENST00000461009 PDLIM5Q96HC4 596 aaKnown RBP12.77□□□□□ -0.37
RAB11FIP3-207ENST00000461009 HIST1H2AHQ96KK5 128 aa12.77□□□□□ -0.37
RAB11FIP3-207ENST00000461009 OR2A14Q96R47 310 aa12.77□□□□□ -0.37
RAB11FIP3-207ENST00000461009 RBBP8Q99708 897 aa12.77□□□□□ -0.37
RAB11FIP3-207ENST00000461009 HIST1H2AJQ99878 128 aa12.77□□□□□ -0.37
RAB11FIP3-207ENST00000461009 H2AFJQ9BTM1 129 aa12.77□□□□□ -0.37
RAB11FIP3-207ENST00000461009 SLC7A5P2Q9GIP4 190 aa12.77□□□□□ -0.37
RAB11FIP3-207ENST00000461009 TWSG1Q9GZX9 223 aa12.77□□□□□ -0.37
RAB11FIP3-207ENST00000461009 PARVBQ9HBI1 364 aa12.77□□□□□ -0.37
RAB11FIP3-207ENST00000461009 POPDC3Q9HBV1 291 aa12.77□□□□□ -0.37
RAB11FIP3-207ENST00000461009 INTS7Q9NVH2 962 aaKnown RBP12.77□□□□□ -0.37
RAB11FIP3-207ENST00000461009 NINJ2Q9NZG7 142 aa12.77□□□□□ -0.37
RAB11FIP3-207ENST00000461009 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.77□□□□□ -0.37
RAB11FIP3-207ENST00000461009 POLHQ9Y253 713 aa12.77□□□□□ -0.37
RAB11FIP3-207ENST00000461009 IKBKGQ9Y6K9 419 aa12.77□□□□□ -0.37
RAB11FIP3-207ENST00000461009 A0A0J9YY10 115 aa12.76□□□□□ -0.37
RAB11FIP3-207ENST00000461009 SLC9B1P1A6NJY1 282 aa12.76□□□□□ -0.37
RAB11FIP3-207ENST00000461009 MYO1CO00159 1063 aa12.76□□□□□ -0.37
RAB11FIP3-207ENST00000461009 SUV39H1O43463 412 aa12.76□□□□□ -0.37
RAB11FIP3-207ENST00000461009 CREG1O75629 220 aa12.76□□□□□ -0.37
RAB11FIP3-207ENST00000461009 SCRG1O75711 98 aa12.76□□□□□ -0.37
RAB11FIP3-207ENST00000461009 PIAS1O75925 651 aa12.76□□□□□ -0.37
RAB11FIP3-207ENST00000461009 SYF2O95926 243 aaKnown RBP12.76□□□□□ -0.37
RAB11FIP3-207ENST00000461009 NTRK1P04629 796 aa12.76□□□□□ -0.37
RAB11FIP3-207ENST00000461009 UGT2B7P16662 529 aa12.76□□□□□ -0.37
RAB11FIP3-207ENST00000461009 OAS2P29728 719 aaKnown RBP12.76□□□□□ -0.37
RAB11FIP3-207ENST00000461009 TAS2R39P59534 338 aa12.76□□□□□ -0.37
RAB11FIP3-207ENST00000461009 SP140Q13342 867 aa12.76□□□□□ -0.37
RAB11FIP3-207ENST00000461009 DNASE1L3Q13609 305 aa12.76□□□□□ -0.37
RAB11FIP3-207ENST00000461009 GRB7Q14451 532 aa12.76□□□□□ -0.37
RAB11FIP3-207ENST00000461009 USP10Q14694 798 aaKnown RBP12.76□□□□□ -0.37
RAB11FIP3-207ENST00000461009 CYP2A13Q16696 494 aa12.76□□□□□ -0.37
RAB11FIP3-207ENST00000461009 C2orf73Q8N5S3 287 aaPredicted RBP12.76□□□□□ -0.37
RAB11FIP3-207ENST00000461009 HMGCLL1Q8TB92 370 aa12.76□□□□□ -0.37
RAB11FIP3-207ENST00000461009 ANKRD7Q92527 254 aa12.76□□□□□ -0.37
RAB11FIP3-207ENST00000461009 N4BP2L2Q92802 583 aaPredicted RBP12.76□□□□□ -0.37
RAB11FIP3-207ENST00000461009 IL17FQ96PD4 163 aa12.76□□□□□ -0.37
RAB11FIP3-207ENST00000461009 GPR22Q99680 433 aa12.76□□□□□ -0.37
RAB11FIP3-207ENST00000461009 OLFM1Q99784 485 aa12.76□□□□□ -0.37
RAB11FIP3-207ENST00000461009 MCMBPQ9BTE3 642 aa12.76□□□□□ -0.37
RAB11FIP3-207ENST00000461009 PITPNM3Q9BZ71 974 aa12.76□□□□□ -0.37
RAB11FIP3-207ENST00000461009 CDC42EP4Q9H3Q1 356 aaKnown RBP12.76□□□□□ -0.37
RAB11FIP3-207ENST00000461009 SPHK1Q9NYA1 384 aa12.76□□□□□ -0.37
RAB11FIP3-207ENST00000461009 CIDEBQ9UHD4 219 aa12.76□□□□□ -0.37
RAB11FIP3-207ENST00000461009 SERTAD3Q9UJW9 196 aa12.76□□□□□ -0.37
RAB11FIP3-207ENST00000461009 BTRCQ9Y297 605 aa12.76□□□□□ -0.37
RAB11FIP3-207ENST00000461009 MTO1Q9Y2Z2 717 aaKnown RBP12.76□□□□□ -0.37
RAB11FIP3-207ENST00000461009 PCDHGA6Q9Y5G7 932 aa12.76□□□□□ -0.37
RAB11FIP3-207ENST00000461009 A0A087WUV0 522 aaPredicted RBP12.75□□□□□ -0.37
RAB11FIP3-207ENST00000461009 CDC14CA4D256 554 aa12.75□□□□□ -0.37
RAB11FIP3-207ENST00000461009 MKRN2OSH3BPM6 223 aa12.75□□□□□ -0.37
RAB11FIP3-207ENST00000461009 WISP1O95388 367 aa12.75□□□□□ -0.37
RAB11FIP3-207ENST00000461009 SLU7O95391 586 aaKnown RBP12.75□□□□□ -0.37
RAB11FIP3-207ENST00000461009 ACSL3O95573 720 aa12.75□□□□□ -0.37
RAB11FIP3-207ENST00000461009 STMN1P16949 149 aa12.75□□□□□ -0.37
RAB11FIP3-207ENST00000461009 ECHS1P30084 290 aa12.75□□□□□ -0.37
RAB11FIP3-207ENST00000461009 PNLIPRP1P54315 467 aa12.75□□□□□ -0.37
RAB11FIP3-207ENST00000461009 NAA25Q14CX7 972 aa12.75□□□□□ -0.37
RAB11FIP3-207ENST00000461009 SF1Q15637 639 aaKnown RBP12.75□□□□□ -0.37
RAB11FIP3-207ENST00000461009 CCSMST1Q4G0I0 132 aa12.75□□□□□ -0.37
RAB11FIP3-207ENST00000461009 TRMT10CQ7L0Y3 403 aaKnown RBP12.75□□□□□ -0.37
RAB11FIP3-207ENST00000461009 LINC01555Q8NAE3 123 aa12.75□□□□□ -0.37
RAB11FIP3-207ENST00000461009 CT55Q8WUE5 264 aa12.75□□□□□ -0.37
RAB11FIP3-207ENST00000461009 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.75□□□□□ -0.37
RAB11FIP3-207ENST00000461009 SMPDL3AQ92484 453 aa12.75□□□□□ -0.37
RAB11FIP3-207ENST00000461009 MR1Q95460 341 aa12.75□□□□□ -0.37
RAB11FIP3-207ENST00000461009 ZUFSPQ96AP4 578 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms