RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 XKR6Q5GH73 641 aa15.02■□□□□ -0
LMNB1-203ENST00000460265 PAGE2BQ5JRK9 111 aa15.02■□□□□ -0
LMNB1-203ENST00000460265 TPRG1Q6ZUI0 275 aa15.02■□□□□ -0
LMNB1-203ENST00000460265 TRMT11Q7Z4G4 463 aaKnown RBP15.02■□□□□ -0
LMNB1-203ENST00000460265 RGL4Q8IZJ4 473 aa15.02■□□□□ -0
LMNB1-203ENST00000460265 PDPRQ8NCN5 879 aa15.02■□□□□ -0
LMNB1-203ENST00000460265 FATE1Q969F0 183 aa15.02■□□□□ -0
LMNB1-203ENST00000460265 FAM234BA2RU67 622 aa15.02□□□□□ -0.01
LMNB1-203ENST00000460265 GRM6O15303 877 aa15.02□□□□□ -0.01
LMNB1-203ENST00000460265 PRKACBP22694 351 aa15.02□□□□□ -0.01
LMNB1-203ENST00000460265 ACRV1P26436 265 aa15.02□□□□□ -0.01
LMNB1-203ENST00000460265 CLCN4P51793 760 aa15.02□□□□□ -0.01
LMNB1-203ENST00000460265 IFITM2Q01629 132 aa15.02□□□□□ -0.01
LMNB1-203ENST00000460265 C22orf39Q6P5X5 142 aa15.02□□□□□ -0.01
LMNB1-203ENST00000460265 DOK6Q6PKX4 331 aa15.02□□□□□ -0.01
LMNB1-203ENST00000460265 GET4Q7L5D6 327 aaPredicted RBP15.02□□□□□ -0.01
LMNB1-203ENST00000460265 SZRD1Q7Z422 152 aa15.02□□□□□ -0.01
LMNB1-203ENST00000460265 TCEAL8Q8IYN2 117 aa15.02□□□□□ -0.01
LMNB1-203ENST00000460265 TMEM199Q8N511 208 aa15.02□□□□□ -0.01
LMNB1-203ENST00000460265 LMNTD1Q8N9Z9 388 aa15.02□□□□□ -0.01
LMNB1-203ENST00000460265 PROKR1Q8TCW9 393 aa15.02□□□□□ -0.01
LMNB1-203ENST00000460265 ADAMTS16Q8TE57 1224 aa15.02□□□□□ -0.01
LMNB1-203ENST00000460265 ZNF382Q96SR6 550 aa15.02□□□□□ -0.01
LMNB1-203ENST00000460265 WDR12Q9GZL7 423 aaKnown RBP15.02□□□□□ -0.01
LMNB1-203ENST00000460265 EVPLLA8MZ36 301 aa15.01□□□□□ -0.01
LMNB1-203ENST00000460265 PTGES3LE9PB15 166 aa15.01□□□□□ -0.01
LMNB1-203ENST00000460265 GNRH1P01148 92 aa15.01□□□□□ -0.01
LMNB1-203ENST00000460265 IFNA8P32881 189 aa15.01□□□□□ -0.01
LMNB1-203ENST00000460265 ETV3P41162 512 aa15.01□□□□□ -0.01
LMNB1-203ENST00000460265 NKX3-2P78367 333 aa15.01□□□□□ -0.01
LMNB1-203ENST00000460265 CHIT1Q13231 466 aa15.01□□□□□ -0.01
LMNB1-203ENST00000460265 COL9A2Q14055 689 aaPredicted RBP15.01□□□□□ -0.01
LMNB1-203ENST00000460265 GTDC1Q4AE62 458 aa15.01□□□□□ -0.01
LMNB1-203ENST00000460265 GPRC6AQ5T6X5 926 aa15.01□□□□□ -0.01
LMNB1-203ENST00000460265 PPP4R4Q6NUP7 873 aa15.01□□□□□ -0.01
LMNB1-203ENST00000460265 GALNT7Q86SF2 657 aa15.01□□□□□ -0.01
LMNB1-203ENST00000460265 GANCQ8TET4 914 aa15.01□□□□□ -0.01
LMNB1-203ENST00000460265 BIRC7Q96CA5 298 aa15.01□□□□□ -0.01
LMNB1-203ENST00000460265 NEK6Q9HC98 313 aa15.01□□□□□ -0.01
LMNB1-203ENST00000460265 MRPS23Q9Y3D9 190 aaKnown RBP15.01□□□□□ -0.01
LMNB1-203ENST00000460265 KMOO15229 486 aa15.01□□□□□ -0.01
LMNB1-203ENST00000460265 DLGAP3O95886 979 aa15.01□□□□□ -0.01
LMNB1-203ENST00000460265 CYP2A7P20853 494 aa15.01□□□□□ -0.01
LMNB1-203ENST00000460265 AQP1P29972 269 aa15.01□□□□□ -0.01
LMNB1-203ENST00000460265 PREPP48147 710 aa15.01□□□□□ -0.01
LMNB1-203ENST00000460265 SF1Q15637 639 aaKnown RBP15.01□□□□□ -0.01
LMNB1-203ENST00000460265 CARD16Q5EG05 197 aa15.01□□□□□ -0.01
LMNB1-203ENST00000460265 SULT1C3Q6IMI6 304 aa15.01□□□□□ -0.01
LMNB1-203ENST00000460265 SYT12Q8IV01 421 aa15.01□□□□□ -0.01
LMNB1-203ENST00000460265 HID1Q8IV36 788 aa15.01□□□□□ -0.01
LMNB1-203ENST00000460265 CMTR2Q8IYT2 770 aaKnown RBP15.01□□□□□ -0.01
LMNB1-203ENST00000460265 MINDY2Q8NBR6 621 aa15.01□□□□□ -0.01
LMNB1-203ENST00000460265 RAB2BQ8WUD1 216 aa15.01□□□□□ -0.01
LMNB1-203ENST00000460265 SLC13A3Q8WWT9 602 aa15.01□□□□□ -0.01
LMNB1-203ENST00000460265 FOXJ1Q92949 421 aa15.01□□□□□ -0.01
LMNB1-203ENST00000460265 MYRFLQ96LU7 910 aa15.01□□□□□ -0.01
LMNB1-203ENST00000460265 RUBCNLQ9H714 662 aa15.01□□□□□ -0.01
LMNB1-203ENST00000460265 GIMAP4Q9NUV9 329 aa15.01□□□□□ -0.01
LMNB1-203ENST00000460265 ACTR3BQ9P1U1 418 aa15.01□□□□□ -0.01
LMNB1-203ENST00000460265 INTS6Q9UL03 887 aaKnown RBP15.01□□□□□ -0.01
LMNB1-203ENST00000460265 TSPAN12O95859 305 aa15.01□□□□□ -0.01
LMNB1-203ENST00000460265 CSRP3P50461 194 aa15.01□□□□□ -0.01
LMNB1-203ENST00000460265 TMBIM6P55061 237 aa15.01□□□□□ -0.01
LMNB1-203ENST00000460265 ILF2Q12905 390 aaKnown RBP15.01□□□□□ -0.01
LMNB1-203ENST00000460265 CCDC58Q4VC31 144 aa15.01□□□□□ -0.01
LMNB1-203ENST00000460265 GRASPQ7Z6J2 395 aaPredicted RBP15.01□□□□□ -0.01
LMNB1-203ENST00000460265 SDR16C5Q8N3Y7 309 aa15.01□□□□□ -0.01
LMNB1-203ENST00000460265 FOPNLQ96NB1 174 aa15.01□□□□□ -0.01
LMNB1-203ENST00000460265 RIOK2Q9BVS4 552 aaKnown RBP15.01□□□□□ -0.01
LMNB1-203ENST00000460265 CD244Q9BZW8 370 aa15.01□□□□□ -0.01
LMNB1-203ENST00000460265 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.01□□□□□ -0.013e-12■■■□□ 16.4
LMNB1-203ENST00000460265 SPASTQ9UBP0 616 aa15.01□□□□□ -0.01
LMNB1-203ENST00000460265 MAGED1Q9Y5V3 778 aaPredicted RBP15.01□□□□□ -0.01
LMNB1-203ENST00000460265 ABHD14A-ACY1A0A1B0GW23 586 aa15□□□□□ -0.01
LMNB1-203ENST00000460265 TLL1O43897 1013 aa15□□□□□ -0.01
LMNB1-203ENST00000460265 NOBOXO60393 691 aa15□□□□□ -0.01
LMNB1-203ENST00000460265 JRKO75564 520 aa15□□□□□ -0.01
LMNB1-203ENST00000460265 CST1P01037 141 aa15□□□□□ -0.01
LMNB1-203ENST00000460265 IL12AP29459 219 aa15□□□□□ -0.01
LMNB1-203ENST00000460265 ARTNQ5T4W7 220 aa15□□□□□ -0.01
LMNB1-203ENST00000460265 CENPNQ96H22 339 aaPredicted RBP15□□□□□ -0.01
LMNB1-203ENST00000460265 ZFYVE19Q96K21 471 aa15□□□□□ -0.01
LMNB1-203ENST00000460265 DGCR6LQ9BY27 220 aa15□□□□□ -0.01
LMNB1-203ENST00000460265 TRIT1Q9H3H1 467 aaKnown RBP15□□□□□ -0.01
LMNB1-203ENST00000460265 TDP1Q9NUW8 608 aa15□□□□□ -0.01
LMNB1-203ENST00000460265 HIDE1A8MVS5 230 aa15□□□□□ -0.01
LMNB1-203ENST00000460265 HS6ST1O60243 411 aa15□□□□□ -0.01
LMNB1-203ENST00000460265 RSL1D1O76021 490 aaKnown RBP15□□□□□ -0.01
LMNB1-203ENST00000460265 CRYZL1O95825 349 aa15□□□□□ -0.01
LMNB1-203ENST00000460265 SERPIND1P05546 499 aa15□□□□□ -0.01
LMNB1-203ENST00000460265 MYF6P23409 242 aa15□□□□□ -0.01
LMNB1-203ENST00000460265 CRTC3Q6UUV7 619 aa15□□□□□ -0.01
LMNB1-203ENST00000460265 SBSNQ6UWP8 590 aa15□□□□□ -0.01
LMNB1-203ENST00000460265 CCDC81Q6ZN84 652 aa15□□□□□ -0.01
LMNB1-203ENST00000460265 ERMP1Q7Z2K6 904 aa15□□□□□ -0.01
LMNB1-203ENST00000460265 SLCO6A1Q86UG4 719 aa15□□□□□ -0.01
LMNB1-203ENST00000460265 ZDHHC13Q8IUH4 622 aa15□□□□□ -0.01
LMNB1-203ENST00000460265 TRPV3Q8NET8 790 aa15□□□□□ -0.01
LMNB1-203ENST00000460265 ZNF641Q96N77 438 aaPredicted RBP15□□□□□ -0.01
LMNB1-203ENST00000460265 LRRC3Q9BY71 257 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms