RNA–Protein interactions for RNA: ENST00000459963.5

NCSTN-209, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 1,246 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-209ENST00000459963 TUBB6Q9BUF5 446 aa7.54□□□□□ -1.2
NCSTN-209ENST00000459963 GTPBP4Q9BZE4 634 aaKnown RBP7.54□□□□□ -1.2
NCSTN-209ENST00000459963 CXorf56Q9H5V9 222 aa7.54□□□□□ -1.2
NCSTN-209ENST00000459963 SPTLC3Q9NUV7 552 aa7.54□□□□□ -1.2
NCSTN-209ENST00000459963 EXOC1Q9NV70 894 aa7.54□□□□□ -1.2
NCSTN-209ENST00000459963 PKD2L2Q9NZM6 624 aa7.54□□□□□ -1.2
NCSTN-209ENST00000459963 IL1RAPL1Q9NZN1 696 aa7.54□□□□□ -1.2
NCSTN-209ENST00000459963 ZNF282Q9UDV7 671 aaPredicted RBP7.54□□□□□ -1.2
NCSTN-209ENST00000459963 DNPEPQ9ULA0 475 aa7.54□□□□□ -1.2
NCSTN-209ENST00000459963 PLCL2Q9UPR0 1127 aa7.54□□□□□ -1.2
NCSTN-209ENST00000459963 MAU2Q9Y6X3 613 aa7.54□□□□□ -1.2
NCSTN-209ENST00000459963 LOC102723996A0A087X1L8 192 aa7.53□□□□□ -1.2
NCSTN-209ENST00000459963 LOC100996750A0A140TA64 210 aa7.53□□□□□ -1.2
NCSTN-209ENST00000459963 OR14I1A6ND48 311 aa7.53□□□□□ -1.2
NCSTN-209ENST00000459963 ARHGAP42A6NI28 874 aa7.53□□□□□ -1.2
NCSTN-209ENST00000459963 GABRR3A8MPY1 467 aa7.53□□□□□ -1.2
NCSTN-209ENST00000459963 DDX3XO00571 662 aaKnown RBP eCLIP7.53□□□□□ -1.2
NCSTN-209ENST00000459963 GAPDHSO14556 408 aaPredicted RBP7.53□□□□□ -1.2
NCSTN-209ENST00000459963 CASKO14936 926 aa7.53□□□□□ -1.2
NCSTN-209ENST00000459963 TMPRSS2O15393 492 aa7.53□□□□□ -1.2
NCSTN-209ENST00000459963 GPRIN2O60269 458 aa7.53□□□□□ -1.2
NCSTN-209ENST00000459963 WDR1O75083 606 aa7.53□□□□□ -1.2
NCSTN-209ENST00000459963 NDUFS1P28331 727 aa7.53□□□□□ -1.2
NCSTN-209ENST00000459963 EFNA3P52797 238 aa7.53□□□□□ -1.2
NCSTN-209ENST00000459963 EMP2P54851 167 aa7.53□□□□□ -1.2
NCSTN-209ENST00000459963 CASP9P55211 416 aa7.53□□□□□ -1.2
NCSTN-209ENST00000459963 FANCCQ00597 558 aa7.53□□□□□ -1.2
NCSTN-209ENST00000459963 NFE2L1Q14494 772 aa7.53□□□□□ -1.2
NCSTN-209ENST00000459963 ETFDHQ16134 617 aa7.53□□□□□ -1.2
NCSTN-209ENST00000459963 CAMK4Q16566 473 aa7.53□□□□□ -1.2
NCSTN-209ENST00000459963 KHDC1Q4VXA5 237 aaKnown RBP7.53□□□□□ -1.2
NCSTN-209ENST00000459963 C1orf185Q5T7R7 199 aa7.53□□□□□ -1.2
NCSTN-209ENST00000459963 SPESP1Q6UW49 350 aa7.53□□□□□ -1.2
NCSTN-209ENST00000459963 ARHGEF18Q6ZSZ5 1173 aa7.53□□□□□ -1.2
NCSTN-209ENST00000459963 ARHGEF19Q8IW93 802 aa7.53□□□□□ -1.2
NCSTN-209ENST00000459963 PYROXD2Q8N2H3 581 aa7.53□□□□□ -1.2
NCSTN-209ENST00000459963 CCDC185Q8N715 623 aa7.53□□□□□ -1.2
NCSTN-209ENST00000459963 TMEM171Q8WVE6 324 aa7.53□□□□□ -1.2
NCSTN-209ENST00000459963 LCN9Q8WX39 176 aa7.53□□□□□ -1.2
NCSTN-209ENST00000459963 GLYATL1Q969I3 302 aa7.53□□□□□ -1.2
NCSTN-209ENST00000459963 KREMEN1Q96MU8 473 aa7.53□□□□□ -1.2
NCSTN-209ENST00000459963 NPAS2Q99743 824 aa7.53□□□□□ -1.2
NCSTN-209ENST00000459963 SPATA16Q9BXB7 569 aa7.53□□□□□ -1.2
NCSTN-209ENST00000459963 KRTAP4-6Q9BYQ5 205 aa7.53□□□□□ -1.2
NCSTN-209ENST00000459963 SLC39A8Q9C0K1 460 aa7.53□□□□□ -1.2
NCSTN-209ENST00000459963 CUTCQ9NTM9 273 aa7.53□□□□□ -1.2
NCSTN-209ENST00000459963 ACTR10Q9NZ32 417 aa7.53□□□□□ -1.2
NCSTN-209ENST00000459963 COLEC10Q9Y6Z7 277 aa7.53□□□□□ -1.2
NCSTN-209ENST00000459963 SH3D21A4FU49 640 aa7.52□□□□□ -1.21
NCSTN-209ENST00000459963 RGSL1A5PLK6 1076 aa7.52□□□□□ -1.21
NCSTN-209ENST00000459963 FZD6O60353 706 aa7.52□□□□□ -1.21
NCSTN-209ENST00000459963 NFKB1P19838 968 aa7.52□□□□□ -1.21
NCSTN-209ENST00000459963 IDH3AP50213 366 aa7.52□□□□□ -1.21
NCSTN-209ENST00000459963 DCDC1P59894 354 aa7.52□□□□□ -1.21
NCSTN-209ENST00000459963 SLC10A7Q0GE19 358 aa7.52□□□□□ -1.21
NCSTN-209ENST00000459963 CDO1Q16878 200 aa7.52□□□□□ -1.21
NCSTN-209ENST00000459963 YOD1Q5VVQ6 348 aaPredicted RBP7.52□□□□□ -1.21
NCSTN-209ENST00000459963 ABHD17CQ6PCB6 329 aa7.52□□□□□ -1.21
NCSTN-209ENST00000459963 ARHGAP36Q6ZRI8 547 aa7.52□□□□□ -1.21
NCSTN-209ENST00000459963 IL17RELQ6ZVW7 336 aa7.52□□□□□ -1.21
NCSTN-209ENST00000459963 PLEKHM3Q6ZWE6 761 aa7.52□□□□□ -1.21
NCSTN-209ENST00000459963 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.52□□□□□ -1.21
NCSTN-209ENST00000459963 TRIM73Q86UV7 250 aa7.52□□□□□ -1.21
NCSTN-209ENST00000459963 PGBD5Q8N414 524 aa7.52□□□□□ -1.21
NCSTN-209ENST00000459963 DNAJC22Q8N4W6 341 aa7.52□□□□□ -1.21
NCSTN-209ENST00000459963 ACVR1CQ8NER5 493 aa7.52□□□□□ -1.21
NCSTN-209ENST00000459963 ISL2Q96A47 359 aa7.52□□□□□ -1.21
NCSTN-209ENST00000459963 ZSCAN5AQ9BUG6 496 aa7.52□□□□□ -1.21
NCSTN-209ENST00000459963 WWP1Q9H0M0 922 aa7.52□□□□□ -1.21
NCSTN-209ENST00000459963 DEFB127Q9H1M4 99 aa7.52□□□□□ -1.21
NCSTN-209ENST00000459963 UPF2Q9HAU5 1272 aaKnown RBP7.52□□□□□ -1.21
NCSTN-209ENST00000459963 EURLQ9NYK6 297 aa7.52□□□□□ -1.21
NCSTN-209ENST00000459963 C6orf203Q9P0P8 240 aaPredicted RBP7.52□□□□□ -1.21
NCSTN-209ENST00000459963 DSCAMO60469 2012 aa7.52□□□□□ -1.21
NCSTN-209ENST00000459963 IGLV3-12A0A075B6K2 115 aa7.51□□□□□ -1.21
NCSTN-209ENST00000459963 C1orf232A0A0U1RR37 186 aa7.51□□□□□ -1.21
NCSTN-209ENST00000459963 KLRC4-KLRK1H3BQV0 150 aa7.51□□□□□ -1.21
NCSTN-209ENST00000459963 FGF10O15520 208 aaPredicted RBP7.51□□□□□ -1.21
NCSTN-209ENST00000459963 TMCC2O75069 709 aa7.51□□□□□ -1.21
NCSTN-209ENST00000459963 POP7O75817 140 aaKnown RBP7.51□□□□□ -1.21
NCSTN-209ENST00000459963 TMIGD3P0DMS9 266 aaPredicted RBP7.51□□□□□ -1.21
NCSTN-209ENST00000459963 IDUAP35475 653 aa7.51□□□□□ -1.21
NCSTN-209ENST00000459963 HSPA9P38646 679 aaKnown RBP7.51□□□□□ -1.21
NCSTN-209ENST00000459963 GATA4P43694 442 aa7.51□□□□□ -1.21
NCSTN-209ENST00000459963 ACTG1P63261 375 aa7.51□□□□□ -1.21
NCSTN-209ENST00000459963 OCRLQ01968 901 aa7.51□□□□□ -1.21
NCSTN-209ENST00000459963 IL10RBQ08334 325 aa7.51□□□□□ -1.21
NCSTN-209ENST00000459963 AP1B1Q10567 949 aa7.51□□□□□ -1.21
NCSTN-209ENST00000459963 GTF2H3Q13889 308 aa7.51□□□□□ -1.21
NCSTN-209ENST00000459963 KRT33BQ14525 404 aa7.51□□□□□ -1.21
NCSTN-209ENST00000459963 C15orf59Q2T9L4 293 aaPredicted RBP7.51□□□□□ -1.21
NCSTN-209ENST00000459963 BTBD16Q32M84 506 aa7.51□□□□□ -1.21
NCSTN-209ENST00000459963 RALGPS1Q5JS13 557 aa7.51□□□□□ -1.21
NCSTN-209ENST00000459963 ALS2CLQ60I27 953 aa7.51□□□□□ -1.21
NCSTN-209ENST00000459963 METRNLQ641Q3 311 aa7.51□□□□□ -1.21
NCSTN-209ENST00000459963 PDPK2PQ6A1A2 396 aa7.51□□□□□ -1.21
NCSTN-209ENST00000459963 PLAG1Q6DJT9 500 aa7.51□□□□□ -1.21
NCSTN-209ENST00000459963 FIGLAQ6QHK4 219 aa7.51□□□□□ -1.21
NCSTN-209ENST00000459963 SULF2Q8IWU5 870 aa7.51□□□□□ -1.21
NCSTN-209ENST00000459963 DTWD1Q8N5C7 304 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms