RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 HIBCHQ6NVY1 386 aaPredicted RBP15.48■□□□□ 0.07
COL7A1-203ENST00000459756 KIAA0408Q6ZU52 694 aa15.48■□□□□ 0.07
COL7A1-203ENST00000459756 IGDCC3Q8IVU1 814 aa15.48■□□□□ 0.07
COL7A1-203ENST00000459756 CNTN4Q8IWV2 1026 aa15.48■□□□□ 0.07
COL7A1-203ENST00000459756 CD200R1Q8TD46 325 aa15.48■□□□□ 0.07
COL7A1-203ENST00000459756 ASB11Q8WXH4 323 aa15.48■□□□□ 0.07
COL7A1-203ENST00000459756 SMPDL3AQ92484 453 aa15.48■□□□□ 0.07
COL7A1-203ENST00000459756 DLG3Q92796 817 aa15.48■□□□□ 0.07
COL7A1-203ENST00000459756 LRRC39Q96DD0 335 aa15.48■□□□□ 0.07
COL7A1-203ENST00000459756 ABHD17AQ96GS6 310 aa15.48■□□□□ 0.07
COL7A1-203ENST00000459756 SNF8Q96H20 258 aa15.48■□□□□ 0.07
COL7A1-203ENST00000459756 GBP5Q96PP8 586 aa15.48■□□□□ 0.07
COL7A1-203ENST00000459756 MIPEPQ99797 713 aa15.48■□□□□ 0.07
COL7A1-203ENST00000459756 TRIM51Q9BSJ1 452 aa15.48■□□□□ 0.07
COL7A1-203ENST00000459756 ENAMQ9NRM1 1142 aa15.48■□□□□ 0.07
COL7A1-203ENST00000459756 TXLNGQ9NUQ3 528 aa15.48■□□□□ 0.07
COL7A1-203ENST00000459756 A0A1W2PPV9 198 aa15.47■□□□□ 0.07
COL7A1-203ENST00000459756 GFYI3L273 518 aa15.47■□□□□ 0.07
COL7A1-203ENST00000459756 J3QKU1 62 aa15.47■□□□□ 0.07
COL7A1-203ENST00000459756 NDC80O14777 642 aa15.47■□□□□ 0.07
COL7A1-203ENST00000459756 SEC31AO94979 1220 aaKnown RBP15.47■□□□□ 0.07
COL7A1-203ENST00000459756 PSMB5P28074 263 aa15.47■□□□□ 0.07
COL7A1-203ENST00000459756 CMPK1P30085 196 aa15.47■□□□□ 0.07
COL7A1-203ENST00000459756 ELK3P41970 407 aa15.47■□□□□ 0.07
COL7A1-203ENST00000459756 SKIV2L2P42285 1042 aaKnown RBP15.47■□□□□ 0.07
COL7A1-203ENST00000459756 ITGA8P53708 1063 aa15.47■□□□□ 0.07
COL7A1-203ENST00000459756 ARSFP54793 590 aa15.47■□□□□ 0.07
COL7A1-203ENST00000459756 ARL4CP56559 192 aa15.47■□□□□ 0.07
COL7A1-203ENST00000459756 DCDP81605 110 aaKnown RBP15.47■□□□□ 0.07
COL7A1-203ENST00000459756 FASTKQ14296 549 aaKnown RBP15.47■□□□□ 0.07
COL7A1-203ENST00000459756 C1orf189Q5VU69 101 aa15.47■□□□□ 0.07
COL7A1-203ENST00000459756 YOD1Q5VVQ6 348 aaPredicted RBP15.47■□□□□ 0.07
COL7A1-203ENST00000459756 LRRC8EQ6NSJ5 796 aa15.47■□□□□ 0.07
COL7A1-203ENST00000459756 UGT3A1Q6NUS8 523 aa15.47■□□□□ 0.07
COL7A1-203ENST00000459756 PRICKLE2Q7Z3G6 844 aa15.47■□□□□ 0.07
COL7A1-203ENST00000459756 GALNT7Q86SF2 657 aa15.47■□□□□ 0.07
COL7A1-203ENST00000459756 ADAMTS17Q8TE56 1095 aa15.47■□□□□ 0.07
COL7A1-203ENST00000459756 CERS2Q96G23 380 aa15.47■□□□□ 0.07
COL7A1-203ENST00000459756 PKP4Q99569 1192 aa15.47■□□□□ 0.07
COL7A1-203ENST00000459756 SELENOSQ9BQE4 189 aa15.47■□□□□ 0.07
COL7A1-203ENST00000459756 ZC3H7BQ9UGR2 993 aaKnown RBP15.47■□□□□ 0.07
COL7A1-203ENST00000459756 GPN3Q9UHW5 284 aaPredicted RBP15.47■□□□□ 0.07
COL7A1-203ENST00000459756 TRMT6Q9UJA5 497 aaKnown RBP15.47■□□□□ 0.07
COL7A1-203ENST00000459756 TEX264Q9Y6I9 313 aa15.47■□□□□ 0.07
COL7A1-203ENST00000459756 SUV39H1O43463 412 aa15.46■□□□□ 0.07
COL7A1-203ENST00000459756 ZBTB14O43829 449 aa15.46■□□□□ 0.07
COL7A1-203ENST00000459756 SRPX2O60687 465 aaPredicted RBP15.46■□□□□ 0.07
COL7A1-203ENST00000459756 SLC16A8O95907 504 aa15.46■□□□□ 0.07
COL7A1-203ENST00000459756 RPA3P35244 121 aaPredicted RBP15.46■□□□□ 0.07
COL7A1-203ENST00000459756 GCGRP47871 477 aa15.46■□□□□ 0.07
COL7A1-203ENST00000459756 CARSP49589 748 aaKnown RBP15.46■□□□□ 0.07
COL7A1-203ENST00000459756 PNLIPRP1P54315 467 aa15.46■□□□□ 0.07
COL7A1-203ENST00000459756 ETF1P62495 437 aaKnown RBP15.46■□□□□ 0.07
COL7A1-203ENST00000459756 NFKB2Q00653 900 aa15.46■□□□□ 0.07
COL7A1-203ENST00000459756 GRM7Q14831 915 aa15.46■□□□□ 0.07
COL7A1-203ENST00000459756 LACTB2Q53H82 288 aaPredicted RBP15.46■□□□□ 0.07
COL7A1-203ENST00000459756 CYHR1Q6ZMK1 362 aa15.46■□□□□ 0.07
COL7A1-203ENST00000459756 ATG14Q6ZNE5 492 aa15.46■□□□□ 0.07
COL7A1-203ENST00000459756 CPNE9Q8IYJ1 553 aa15.46■□□□□ 0.07
COL7A1-203ENST00000459756 ZNF592Q92610 1267 aa15.46■□□□□ 0.07
COL7A1-203ENST00000459756 CFAP36Q96G28 342 aa15.46■□□□□ 0.07
COL7A1-203ENST00000459756 PWWP2AQ96N64 755 aa15.46■□□□□ 0.07
COL7A1-203ENST00000459756 ZNF285Q96NJ3 590 aa15.46■□□□□ 0.07
COL7A1-203ENST00000459756 KRT12Q99456 494 aa15.46■□□□□ 0.07
COL7A1-203ENST00000459756 NDNQ99608 321 aa15.46■□□□□ 0.07
COL7A1-203ENST00000459756 PPANQ9NQ55 473 aaKnown RBP15.46■□□□□ 0.07
COL7A1-203ENST00000459756 ZNF71Q9NQZ8 489 aaPredicted RBP15.46■□□□□ 0.07
COL7A1-203ENST00000459756 TAS2R13Q9NYV9 303 aa15.46■□□□□ 0.07
COL7A1-203ENST00000459756 IFT80Q9P2H3 777 aaPredicted RBP15.46■□□□□ 0.07
COL7A1-203ENST00000459756 DHCR7Q9UBM7 475 aaKnown RBP15.46■□□□□ 0.07
COL7A1-203ENST00000459756 CHMP2BQ9UQN3 213 aa15.46■□□□□ 0.07
COL7A1-203ENST00000459756 FER1L5A0AVI2 2057 aa15.46■□□□□ 0.07
COL7A1-203ENST00000459756 PCM1Q15154 2024 aa15.45■□□□□ 0.06
COL7A1-203ENST00000459756 EFCAB8A8MWE9 144 aa15.45■□□□□ 0.06
COL7A1-203ENST00000459756 CTSVO60911 334 aa15.45■□□□□ 0.06
COL7A1-203ENST00000459756 KLF7O75840 302 aaPredicted RBP15.45■□□□□ 0.06
COL7A1-203ENST00000459756 AHSGP02765 367 aa15.45■□□□□ 0.06
COL7A1-203ENST00000459756 MCM3P25205 808 aa15.45■□□□□ 0.06
COL7A1-203ENST00000459756 GABRB3P28472 473 aa15.45■□□□□ 0.06
COL7A1-203ENST00000459756 FRG1Q14331 258 aaKnown RBP15.45■□□□□ 0.06
COL7A1-203ENST00000459756 NKAIN1Q4KMZ8 207 aa15.45■□□□□ 0.06
COL7A1-203ENST00000459756 HP1BP3Q5SSJ5 553 aaPredicted RBP15.45■□□□□ 0.06
COL7A1-203ENST00000459756 FAM69BQ5VUD6 431 aa15.45■□□□□ 0.06
COL7A1-203ENST00000459756 MLIPQ5VWP3 458 aa15.45■□□□□ 0.06
COL7A1-203ENST00000459756 STEAP4Q687X5 459 aa15.45■□□□□ 0.06
COL7A1-203ENST00000459756 TCTN3Q6NUS6 607 aa15.45■□□□□ 0.06
COL7A1-203ENST00000459756 BBOF1Q8ND07 529 aa15.45■□□□□ 0.06
COL7A1-203ENST00000459756 ZNF480Q8WV37 535 aa15.45■□□□□ 0.06
COL7A1-203ENST00000459756 DPH7Q9BTV6 452 aa15.45■□□□□ 0.06
COL7A1-203ENST00000459756 ACAT2Q9BWD1 397 aa15.45■□□□□ 0.06
COL7A1-203ENST00000459756 TRIM31Q9BZY9 425 aa15.45■□□□□ 0.06
COL7A1-203ENST00000459756 PLAC1Q9HBJ0 212 aa15.45■□□□□ 0.06
COL7A1-203ENST00000459756 ANKMY1Q9P2S6 941 aa15.45■□□□□ 0.06
COL7A1-203ENST00000459756 NDOR1Q9UHB4 597 aa15.45■□□□□ 0.06
COL7A1-203ENST00000459756 TLK1Q9UKI8 766 aa15.45■□□□□ 0.06
COL7A1-203ENST00000459756 A0A1B0GX78 115 aa15.44■□□□□ 0.06
COL7A1-203ENST00000459756 OR2A25A4D2G3 310 aa15.44■□□□□ 0.06
COL7A1-203ENST00000459756 FITM1A5D6W6 292 aa15.44■□□□□ 0.06
COL7A1-203ENST00000459756 ARGFXA6NJG6 315 aa15.44■□□□□ 0.06
COL7A1-203ENST00000459756 E7ENX8 843 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms