RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 GALPQ9UBC7 116 aa16.85■□□□□ 0.29
SCARNA2-201ENST00000458748 CHMP2BQ9UQN3 213 aa16.85■□□□□ 0.29
SCARNA2-201ENST00000458748 MAN2B2Q9Y2E5 1009 aa16.85■□□□□ 0.29
SCARNA2-201ENST00000458748 KCNMB2Q9Y691 235 aa16.85■□□□□ 0.29
SCARNA2-201ENST00000458748 SNRNP200O75643 2136 aaKnown RBP16.84■□□□□ 0.29
SCARNA2-201ENST00000458748 ARHGEF33A8MVX0 844 aa16.84■□□□□ 0.29
SCARNA2-201ENST00000458748 SRPX2O60687 465 aaPredicted RBP16.84■□□□□ 0.29
SCARNA2-201ENST00000458748 SYF2O95926 243 aaKnown RBP16.84■□□□□ 0.29
SCARNA2-201ENST00000458748 PIM1P11309 404 aaPredicted RBP16.84■□□□□ 0.29
SCARNA2-201ENST00000458748 DCDP81605 110 aaKnown RBP16.84■□□□□ 0.29
SCARNA2-201ENST00000458748 CUL1Q13616 776 aa16.84■□□□□ 0.29
SCARNA2-201ENST00000458748 CCSMST1Q4G0I0 132 aa16.84■□□□□ 0.29
SCARNA2-201ENST00000458748 ATP1A1-AS1Q5TC04 95 aa16.84■□□□□ 0.29
SCARNA2-201ENST00000458748 PRAMEF17Q5VTA0 474 aa16.84■□□□□ 0.29
SCARNA2-201ENST00000458748 ZNF549Q6P9A3 640 aa16.84■□□□□ 0.29
SCARNA2-201ENST00000458748 ENDOVQ8N8Q3 282 aaKnown RBP16.84■□□□□ 0.29
SCARNA2-201ENST00000458748 TTC29Q8NA56 475 aaPredicted RBP16.84■□□□□ 0.29
SCARNA2-201ENST00000458748 SPATA4Q8NEY3 305 aa16.84■□□□□ 0.29
SCARNA2-201ENST00000458748 OR2L3Q8NG85 312 aa16.84■□□□□ 0.29
SCARNA2-201ENST00000458748 CD200R1Q8TD46 325 aa16.84■□□□□ 0.29
SCARNA2-201ENST00000458748 MCOLN3Q8TDD5 553 aa16.84■□□□□ 0.29
SCARNA2-201ENST00000458748 ASB11Q8WXH4 323 aa16.84■□□□□ 0.29
SCARNA2-201ENST00000458748 SPRTNQ9H040 489 aaPredicted RBP16.84■□□□□ 0.29
SCARNA2-201ENST00000458748 NSMCE4AQ9NXX6 385 aa16.84■□□□□ 0.29
SCARNA2-201ENST00000458748 ZFATQ9P243 1243 aa16.84■□□□□ 0.29
SCARNA2-201ENST00000458748 ANKMY1Q9P2S6 941 aa16.84■□□□□ 0.29
SCARNA2-201ENST00000458748 UTP11Q9Y3A2 253 aaKnown RBP16.84■□□□□ 0.29
SCARNA2-201ENST00000458748 KLK4Q9Y5K2 254 aa16.84■□□□□ 0.29
SCARNA2-201ENST00000458748 TEX264Q9Y6I9 313 aa16.84■□□□□ 0.29
SCARNA2-201ENST00000458748 PRICKLE3O43900 615 aaPredicted RBP16.83■□□□□ 0.28
SCARNA2-201ENST00000458748 BANF1O75531 89 aa16.83■□□□□ 0.28
SCARNA2-201ENST00000458748 C8GP07360 202 aa16.83■□□□□ 0.28
SCARNA2-201ENST00000458748 GRIA3P42263 894 aa16.83■□□□□ 0.28
SCARNA2-201ENST00000458748 GABRA4P48169 554 aa16.83■□□□□ 0.28
SCARNA2-201ENST00000458748 PNLIPRP1P54315 467 aa16.83■□□□□ 0.28
SCARNA2-201ENST00000458748 PDIA2Q13087 525 aaKnown RBP16.83■□□□□ 0.28
SCARNA2-201ENST00000458748 GRM7Q14831 915 aa16.83■□□□□ 0.28
SCARNA2-201ENST00000458748 NCF4Q15080 339 aa16.83■□□□□ 0.28
SCARNA2-201ENST00000458748 FAM214AQ32MH5 1076 aa16.83■□□□□ 0.28
SCARNA2-201ENST00000458748 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.83■□□□□ 0.28
SCARNA2-201ENST00000458748 SYT10Q6XYQ8 523 aa16.83■□□□□ 0.28
SCARNA2-201ENST00000458748 CPNE9Q8IYJ1 553 aa16.83■□□□□ 0.28
SCARNA2-201ENST00000458748 MYO1HQ8N1T3 1032 aa16.83■□□□□ 0.28
SCARNA2-201ENST00000458748 ZNF655Q8N720 491 aaPredicted RBP16.83■□□□□ 0.28
SCARNA2-201ENST00000458748 C9orf43Q8TAL5 461 aaPredicted RBP16.83■□□□□ 0.28
SCARNA2-201ENST00000458748 PKP4Q99569 1192 aa16.83■□□□□ 0.28
SCARNA2-201ENST00000458748 MIPEPQ99797 713 aa16.83■□□□□ 0.28
SCARNA2-201ENST00000458748 SELENOSQ9BQE4 189 aa16.83■□□□□ 0.28
SCARNA2-201ENST00000458748 ERP44Q9BS26 406 aa16.83■□□□□ 0.28
SCARNA2-201ENST00000458748 RAB17Q9H0T7 212 aa16.83■□□□□ 0.28
SCARNA2-201ENST00000458748 CLMPQ9H6B4 373 aa16.83■□□□□ 0.28
SCARNA2-201ENST00000458748 WHRNQ9P202 907 aa16.83■□□□□ 0.28
SCARNA2-201ENST00000458748 NDOR1Q9UHB4 597 aa16.83■□□□□ 0.28
SCARNA2-201ENST00000458748 SNX24Q9Y343 169 aa16.83■□□□□ 0.28
SCARNA2-201ENST00000458748 MYO18BQ8IUG5 2567 aa16.83■□□□□ 0.28
SCARNA2-201ENST00000458748 H3BMH7 237 aa16.82■□□□□ 0.28
SCARNA2-201ENST00000458748 MKRN2OSH3BPM6 223 aa16.82■□□□□ 0.28
SCARNA2-201ENST00000458748 GFYI3L273 518 aa16.82■□□□□ 0.28
SCARNA2-201ENST00000458748 SUV39H1O43463 412 aa16.82■□□□□ 0.28
SCARNA2-201ENST00000458748 RFPL1O75677 317 aa16.82■□□□□ 0.28
SCARNA2-201ENST00000458748 WISP1O95388 367 aa16.82■□□□□ 0.28
SCARNA2-201ENST00000458748 AHSGP02765 367 aa16.82■□□□□ 0.28
SCARNA2-201ENST00000458748 FURINP09958 794 aa16.82■□□□□ 0.28
SCARNA2-201ENST00000458748 HIST1H2AGP0C0S8 130 aaPredicted RBP16.82■□□□□ 0.28
SCARNA2-201ENST00000458748 ERGP11308 486 aa16.82■□□□□ 0.28
SCARNA2-201ENST00000458748 HIST1H2ADP20671 130 aa16.82■□□□□ 0.28
SCARNA2-201ENST00000458748 MCM3P25205 808 aa16.82■□□□□ 0.28
SCARNA2-201ENST00000458748 RPL21P46778 160 aaKnown RBP16.82■□□□□ 0.28
SCARNA2-201ENST00000458748 ABATP80404 500 aa16.82■□□□□ 0.28
SCARNA2-201ENST00000458748 CAV1Q03135 178 aa16.82■□□□□ 0.28
SCARNA2-201ENST00000458748 KCNC4Q03721 635 aa16.82■□□□□ 0.28
SCARNA2-201ENST00000458748 CKAP4Q07065 602 aaKnown RBP16.82■□□□□ 0.28
SCARNA2-201ENST00000458748 SP140Q13342 867 aa16.82■□□□□ 0.28
SCARNA2-201ENST00000458748 PDAP1Q13442 181 aaKnown RBP16.82■□□□□ 0.28
SCARNA2-201ENST00000458748 TSTA3Q13630 321 aaPredicted RBP16.82■□□□□ 0.28
SCARNA2-201ENST00000458748 PTCHD3Q3KNS1 767 aa16.82■□□□□ 0.28
SCARNA2-201ENST00000458748 HP1BP3Q5SSJ5 553 aaPredicted RBP16.82■□□□□ 0.28
SCARNA2-201ENST00000458748 TEDDM1Q5T9Z0 273 aa16.82■□□□□ 0.28
SCARNA2-201ENST00000458748 STEAP4Q687X5 459 aa16.82■□□□□ 0.28
SCARNA2-201ENST00000458748 FAM45BPQ6NSW5 357 aa16.82■□□□□ 0.28
SCARNA2-201ENST00000458748 UBE2R2Q712K3 238 aaPredicted RBP16.82■□□□□ 0.28
SCARNA2-201ENST00000458748 IGDCC3Q8IVU1 814 aa16.82■□□□□ 0.28
SCARNA2-201ENST00000458748 APLFQ8IW19 511 aaPredicted RBP16.82■□□□□ 0.28
SCARNA2-201ENST00000458748 FAM20CQ8IXL6 584 aa16.82■□□□□ 0.28
SCARNA2-201ENST00000458748 FBXO36Q8NEA4 188 aa16.82■□□□□ 0.28
SCARNA2-201ENST00000458748 OR2A1Q8NGT9 310 aa16.82■□□□□ 0.28
SCARNA2-201ENST00000458748 GIMAP7Q8NHV1 300 aa16.82■□□□□ 0.28
SCARNA2-201ENST00000458748 FAM45AQ8TCE6 357 aa16.82■□□□□ 0.28
SCARNA2-201ENST00000458748 HIST1H2AHQ96KK5 128 aa16.82■□□□□ 0.28
SCARNA2-201ENST00000458748 IP6K3Q96PC2 410 aa16.82■□□□□ 0.28
SCARNA2-201ENST00000458748 NDNQ99608 321 aa16.82■□□□□ 0.28
SCARNA2-201ENST00000458748 SLC30A3Q99726 388 aa16.82■□□□□ 0.28
SCARNA2-201ENST00000458748 HIST1H2AJQ99878 128 aa16.82■□□□□ 0.28
SCARNA2-201ENST00000458748 H2AFJQ9BTM1 129 aa16.82■□□□□ 0.28
SCARNA2-201ENST00000458748 MRPS30Q9NP92 439 aaKnown RBP16.82■□□□□ 0.28
SCARNA2-201ENST00000458748 IFT80Q9P2H3 777 aaPredicted RBP16.82■□□□□ 0.28
SCARNA2-201ENST00000458748 TCFL5Q9UL49 500 aa16.82■□□□□ 0.28
SCARNA2-201ENST00000458748 G3BP2Q9UN86 482 aaKnown RBP16.82■□□□□ 0.28
SCARNA2-201ENST00000458748 KLHL20Q9Y2M5 609 aa16.82■□□□□ 0.28
SCARNA2-201ENST00000458748 MED16Q9Y2X0 877 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms