RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 ATP4BP51164 291 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 ZNF33BQ06732 778 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 ACTN3Q08043 901 aaPredicted RBP8.69□□□□□ -1.02
VPS50-207ENST00000458530 MAD2L1Q13257 205 aaPredicted RBP8.69□□□□□ -1.02
VPS50-207ENST00000458530 TUBB3Q13509 450 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 LRP8Q14114 963 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 PTK2BQ14289 1009 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 NFE2L1Q14494 772 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 SQLEQ14534 574 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 LSM12Q3MHD2 195 aaKnown RBP8.69□□□□□ -1.02
VPS50-207ENST00000458530 PLA2G4EQ3MJ16 856 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 GGTA1PQ4G0N0 100 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 C10orf62Q5T681 223 aaPredicted RBP8.69□□□□□ -1.02
VPS50-207ENST00000458530 VWA5B1Q5TIE3 1220 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 METRNLQ641Q3 311 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 CLEC6AQ6EIG7 209 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 ANO7Q6IWH7 933 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 CAPN13Q6MZZ7 669 aaPredicted RBP8.69□□□□□ -1.02
VPS50-207ENST00000458530 RPS27LQ71UM5 84 aaKnown RBP8.69□□□□□ -1.02
VPS50-207ENST00000458530 SPATA19Q7Z5L4 167 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 SYVN1Q86TM6 617 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 ZNF547Q8IVP9 402 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 CAMKK1Q8N5S9 505 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 METTL6Q8TCB7 284 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 MAPK15Q8TD08 544 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 ZCCHC14Q8WYQ9 949 aaKnown RBP8.69□□□□□ -1.02
VPS50-207ENST00000458530 DLG3Q92796 817 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 RAD51AP1Q96B01 352 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 KLHL29Q96CT2 875 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 SPACA7Q96KW9 195 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 OR2M4Q96R27 311 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 EDEM2Q9BV94 578 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 TRIT1Q9H3H1 467 aaKnown RBP8.69□□□□□ -1.02
VPS50-207ENST00000458530 ACTR8Q9H981 624 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 ACSS2Q9NR19 701 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 NDE1Q9NXR1 346 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 GPRC5BQ9NZH0 403 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 SPATA7Q9P0W8 599 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 MBD1Q9UIS9 605 aaPredicted RBP8.69□□□□□ -1.02
VPS50-207ENST00000458530 MOSPD1Q9UJG1 213 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 SNX6Q9UNH7 406 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 ASF1AQ9Y294 204 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 TP53BP1Q12888 1972 aaPredicted RBP8.69□□□□□ -1.02
VPS50-207ENST00000458530 APC2O95996 2303 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 BPTFQ12830 3046 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 PRSS38A1L453 326 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 CAPN14A8MX76 684 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 SLC28A1O00337 649 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 PIP5K1BO14986 540 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 RGS14O43566 566 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 OR4F21O95013 312 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 CLDN9O95484 217 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 C1orf105O95561 183 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 ACP5P13686 325 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 LBPP18428 481 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 TSPAN8P19075 237 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 IDSP22304 550 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 NDUFS1P28331 727 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 PTPN4P29074 926 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 HALP42357 657 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 BDKRB1P46663 353 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 NCALDP61601 193 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 MXRA7P84157 204 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 TRAF3Q13114 568 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 ARHGAP19Q14CB8 494 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 HERC3Q15034 1050 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 GSTA3Q16772 222 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 SMU1Q2TAY7 513 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 PTCHD3Q3KNS1 767 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 DNAL1Q4LDG9 190 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 SOWAHCQ53LP3 525 aaPredicted RBP8.68□□□□□ -1.02
VPS50-207ENST00000458530 OGFOD2Q6N063 350 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 AGTRAPQ6RW13 159 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 ATG14Q6ZNE5 492 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 C11orf96Q7Z7L8 435 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 DCP2Q8IU60 420 aaKnown RBP8.68□□□□□ -1.02
VPS50-207ENST00000458530 SYTL1Q8IYJ3 562 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 TBC1D21Q8IYX1 336 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 FAM9CQ8IZT9 166 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 CPSF7Q8N684 471 aaKnown RBP8.68□□□□□ -1.02
VPS50-207ENST00000458530 CDYL2Q8N8U2 506 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 OR4F6Q8NGB9 312 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 OR9A1PQ8NGU1 263 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 OR5K2Q8NHB8 316 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 TFGQ92734 400 aaPredicted RBP8.68□□□□□ -1.02
VPS50-207ENST00000458530 TUBGCP3Q96CW5 907 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 REPS1Q96D71 796 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 MOCOSQ96EN8 888 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 TOE1Q96GM8 510 aaKnown RBP8.68□□□□□ -1.02
VPS50-207ENST00000458530 SCARF2Q96GP6 870 aaPredicted RBP8.68□□□□□ -1.02
VPS50-207ENST00000458530 PPP1R36Q96LQ0 422 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 OR52B2Q96RD2 323 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 MIPEPQ99797 713 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 CCDC106Q9BWC9 280 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 LGR4Q9BXB1 951 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 PCBD2Q9H0N5 130 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 OR52A5Q9H2C5 316 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 LRMDAQ9H2I8 198 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 OSGEPL1Q9H4B0 414 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 WDR55Q9H6Y2 383 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms