RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 DHCR7Q9UBM7 475 aaKnown RBP17.97■□□□□ 0.47
USP39-209ENST00000458268 TAC3Q9UHF0 121 aa17.97■□□□□ 0.47
USP39-209ENST00000458268 KCND3Q9UK17 655 aa17.97■□□□□ 0.47
USP39-209ENST00000458268 ADAMTS6Q9UKP5 1117 aa17.97■□□□□ 0.47
USP39-209ENST00000458268 A0A0J9YVX5 310 aa17.96■□□□□ 0.47
USP39-209ENST00000458268 MYO1CO00159 1063 aa17.96■□□□□ 0.47
USP39-209ENST00000458268 MEN1O00255 615 aa17.96■□□□□ 0.47
USP39-209ENST00000458268 ZSCAN9O15535 394 aaPredicted RBP17.96■□□□□ 0.47
USP39-209ENST00000458268 NRP2O60462 931 aa17.96■□□□□ 0.47
USP39-209ENST00000458268 SLC16A8O95907 504 aa17.96■□□□□ 0.47
USP39-209ENST00000458268 EIF2S1P05198 315 aaKnown RBP17.96■□□□□ 0.47
USP39-209ENST00000458268 FAM69BQ5VUD6 431 aa17.96■□□□□ 0.47
USP39-209ENST00000458268 FCRL6Q6DN72 434 aa17.96■□□□□ 0.47
USP39-209ENST00000458268 LCN10Q6JVE6 187 aa17.96■□□□□ 0.47
USP39-209ENST00000458268 MBOAT1Q6ZNC8 495 aa17.96■□□□□ 0.47
USP39-209ENST00000458268 MCATQ8IVS2 390 aaKnown RBP17.96■□□□□ 0.47
USP39-209ENST00000458268 DNAJC22Q8N4W6 341 aa17.96■□□□□ 0.47
USP39-209ENST00000458268 OR2L3Q8NG85 312 aa17.96■□□□□ 0.47
USP39-209ENST00000458268 FBXO25Q8TCJ0 367 aa17.96■□□□□ 0.47
USP39-209ENST00000458268 ASB11Q8WXH4 323 aa17.96■□□□□ 0.47
USP39-209ENST00000458268 OLFM1Q99784 485 aa17.96■□□□□ 0.47
USP39-209ENST00000458268 MRPS30Q9NP92 439 aaKnown RBP17.96■□□□□ 0.47
USP39-209ENST00000458268 PCMTD2Q9NV79 361 aa17.96■□□□□ 0.47
USP39-209ENST00000458268 EURLQ9NYK6 297 aa17.96■□□□□ 0.47
USP39-209ENST00000458268 TXNDC16Q9P2K2 825 aa17.96■□□□□ 0.47
USP39-209ENST00000458268 KLHL42Q9P2K6 505 aa17.96■□□□□ 0.47
USP39-209ENST00000458268 FAM95CA0A1B0GW59 222 aa17.95■□□□□ 0.46
USP39-209ENST00000458268 A0A1W2PPV9 198 aa17.95■□□□□ 0.46
USP39-209ENST00000458268 ZNF839A8K0R7 811 aa17.95■□□□□ 0.46
USP39-209ENST00000458268 ALAS2P22557 587 aa17.95■□□□□ 0.46
USP39-209ENST00000458268 SKIV2L2P42285 1042 aaKnown RBP17.95■□□□□ 0.46
USP39-209ENST00000458268 GABRA4P48169 554 aa17.95■□□□□ 0.46
USP39-209ENST00000458268 VSX2P58304 361 aaPredicted RBP17.95■□□□□ 0.46
USP39-209ENST00000458268 TIAL1Q01085 375 aaKnown RBP eCLIP17.95■□□□□ 0.46
USP39-209ENST00000458268 GUCY2DQ02846 1103 aa17.95■□□□□ 0.46
USP39-209ENST00000458268 ZNF460Q14592 562 aa17.95■□□□□ 0.46
USP39-209ENST00000458268 CYP2A13Q16696 494 aa17.95■□□□□ 0.46
USP39-209ENST00000458268 BORAQ6PGQ7 559 aa17.95■□□□□ 0.46
USP39-209ENST00000458268 CYHR1Q6ZMK1 362 aa17.95■□□□□ 0.46
USP39-209ENST00000458268 ZNF572Q7Z3I7 529 aaPredicted RBP17.95■□□□□ 0.46
USP39-209ENST00000458268 CTAGE3PQ8IX95 158 aa17.95■□□□□ 0.46
USP39-209ENST00000458268 DSELQ8IZU8 1212 aa17.95■□□□□ 0.46
USP39-209ENST00000458268 ENDOVQ8N8Q3 282 aaKnown RBP17.95■□□□□ 0.46
USP39-209ENST00000458268 ZNF480Q8WV37 535 aa17.95■□□□□ 0.46
USP39-209ENST00000458268 MED8Q96G25 268 aa17.95■□□□□ 0.46
USP39-209ENST00000458268 SELENOSQ9BQE4 189 aa17.95■□□□□ 0.46
USP39-209ENST00000458268 DPH7Q9BTV6 452 aa17.95■□□□□ 0.46
USP39-209ENST00000458268 NDC1Q9BTX1 674 aa17.95■□□□□ 0.46
USP39-209ENST00000458268 VWA7Q9Y334 891 aa17.95■□□□□ 0.46
USP39-209ENST00000458268 C9J4A7 227 aa17.94■□□□□ 0.46
USP39-209ENST00000458268 PRICKLE3O43900 615 aaPredicted RBP17.94■□□□□ 0.46
USP39-209ENST00000458268 CREG1O75629 220 aa17.94■□□□□ 0.46
USP39-209ENST00000458268 HBQ1P09105 142 aa17.94■□□□□ 0.46
USP39-209ENST00000458268 AGXTP21549 392 aa17.94■□□□□ 0.46
USP39-209ENST00000458268 FDXRP22570 491 aa17.94■□□□□ 0.46
USP39-209ENST00000458268 IL2P60568 153 aa17.94■□□□□ 0.46
USP39-209ENST00000458268 CAV1Q03135 178 aa17.94■□□□□ 0.46
USP39-209ENST00000458268 LINC00303Q3SY05 128 aa17.94■□□□□ 0.46
USP39-209ENST00000458268 ZC3H12BQ5HYM0 836 aaKnown RBP17.94■□□□□ 0.46
USP39-209ENST00000458268 MLIPQ5VWP3 458 aa17.94■□□□□ 0.46
USP39-209ENST00000458268 LRRC8EQ6NSJ5 796 aa17.94■□□□□ 0.46
USP39-209ENST00000458268 METTL27Q8N6F8 245 aaPredicted RBP17.94■□□□□ 0.46
USP39-209ENST00000458268 OR2A1Q8NGT9 310 aa17.94■□□□□ 0.46
USP39-209ENST00000458268 MCOLN3Q8TDD5 553 aa17.94■□□□□ 0.46
USP39-209ENST00000458268 CDKL2Q92772 493 aa17.94■□□□□ 0.46
USP39-209ENST00000458268 SEMA4CQ9C0C4 833 aa17.94■□□□□ 0.46
USP39-209ENST00000458268 SLC6A20Q9NP91 592 aa17.94■□□□□ 0.46
USP39-209ENST00000458268 SMYD2Q9NRG4 433 aa17.94■□□□□ 0.46
USP39-209ENST00000458268 GPN3Q9UHW5 284 aaPredicted RBP17.94■□□□□ 0.46
USP39-209ENST00000458268 SNX7Q9UNH6 387 aa17.94■□□□□ 0.46
USP39-209ENST00000458268 FARSAQ9Y285 508 aaKnown RBP17.94■□□□□ 0.46
USP39-209ENST00000458268 CCDC88CQ9P219 2028 aa17.94■□□□□ 0.46
USP39-209ENST00000458268 FER1L5A0AVI2 2057 aa17.94■□□□□ 0.46
USP39-209ENST00000458268 C21orf140B9A014 251 aa17.93■□□□□ 0.46
USP39-209ENST00000458268 EIF3HO15372 352 aaKnown RBP eCLIP17.93■□□□□ 0.46
USP39-209ENST00000458268 CTSVO60911 334 aa17.93■□□□□ 0.46
USP39-209ENST00000458268 ITGB2P05107 769 aa17.93■□□□□ 0.46
USP39-209ENST00000458268 C8GP07360 202 aa17.93■□□□□ 0.46
USP39-209ENST00000458268 FURINP09958 794 aa17.93■□□□□ 0.46
USP39-209ENST00000458268 MSL3P1P0C860 447 aa17.93■□□□□ 0.46
USP39-209ENST00000458268 CCR10P46092 362 aa17.93■□□□□ 0.46
USP39-209ENST00000458268 SLC12A2P55011 1212 aa17.93■□□□□ 0.46
USP39-209ENST00000458268 NFKB2Q00653 900 aa17.93■□□□□ 0.46
USP39-209ENST00000458268 ICE2Q659A1 982 aa17.93■□□□□ 0.46
USP39-209ENST00000458268 ZDHHC24Q6UX98 284 aa17.93■□□□□ 0.46
USP39-209ENST00000458268 TTLL10Q6ZVT0 673 aa17.93■□□□□ 0.46
USP39-209ENST00000458268 GALNT7Q86SF2 657 aa17.93■□□□□ 0.46
USP39-209ENST00000458268 ZC3HC1Q86WB0 502 aaKnown RBP17.93■□□□□ 0.46
USP39-209ENST00000458268 TTC29Q8NA56 475 aaPredicted RBP17.93■□□□□ 0.46
USP39-209ENST00000458268 HMGCLL1Q8TB92 370 aa17.93■□□□□ 0.46
USP39-209ENST00000458268 MRRFQ96E11 262 aaKnown RBP17.93■□□□□ 0.46
USP39-209ENST00000458268 UNKQ9C0B0 810 aaKnown RBP17.93■□□□□ 0.46
USP39-209ENST00000458268 ATG10Q9H0Y0 220 aa17.93■□□□□ 0.46
USP39-209ENST00000458268 NSMCE4AQ9NXX6 385 aa17.93■□□□□ 0.46
USP39-209ENST00000458268 UTP6Q9NYH9 597 aaKnown RBP17.93■□□□□ 0.46
USP39-209ENST00000458268 CORO1CQ9ULV4 474 aaPredicted RBP17.93■□□□□ 0.46
USP39-209ENST00000458268 PDE10AQ9Y233 779 aa17.93■□□□□ 0.46
USP39-209ENST00000458268 AP1M2Q9Y6Q5 423 aa17.93■□□□□ 0.46
USP39-209ENST00000458268 HEATR5BQ9P2D3 2071 aa17.92■□□□□ 0.46
USP39-209ENST00000458268 CTAGE15A4D2H0 777 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms