RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 IL12RB2Q99665 862 aa19.23■□□□□ 0.67
SNX27-204ENST00000458013 CCSER2Q9H7U1 834 aa19.23■□□□□ 0.67
SNX27-204ENST00000458013 NKX1-2Q9UD57 310 aaPredicted RBP19.23■□□□□ 0.67
SNX27-204ENST00000458013 C8GP07360 202 aa19.23■□□□□ 0.67
SNX27-204ENST00000458013 CKMT2P17540 419 aa19.23■□□□□ 0.67
SNX27-204ENST00000458013 PTPN2P17706 415 aa19.23■□□□□ 0.67
SNX27-204ENST00000458013 HNRNPH3P31942 346 aaKnown RBP19.23■□□□□ 0.67
SNX27-204ENST00000458013 DAOAP59103 153 aa19.23■□□□□ 0.67
SNX27-204ENST00000458013 CRB2Q5IJ48 1285 aa19.23■□□□□ 0.67
SNX27-204ENST00000458013 FKBP1CQ5VVH2 108 aa19.23■□□□□ 0.67
SNX27-204ENST00000458013 PLEKHA6Q9Y2H5 1048 aa19.23■□□□□ 0.67
SNX27-204ENST00000458013 GATBO75879 557 aaKnown RBP19.22■□□□□ 0.67
SNX27-204ENST00000458013 HOXC6P09630 235 aa19.22■□□□□ 0.67
SNX27-204ENST00000458013 HEPACAMQ14CZ8 416 aa19.22■□□□□ 0.67
SNX27-204ENST00000458013 ZNF648Q5T619 568 aaPredicted RBP19.22■□□□□ 0.67
SNX27-204ENST00000458013 MARCH9Q86YJ5 346 aa19.22■□□□□ 0.67
SNX27-204ENST00000458013 RBCK1Q9BYM8 510 aa19.22■□□□□ 0.67
SNX27-204ENST00000458013 GIMAP2Q9UG22 337 aa19.22■□□□□ 0.67
SNX27-204ENST00000458013 GNG8Q9UK08 70 aa19.22■□□□□ 0.67
SNX27-204ENST00000458013 CNTN6Q9UQ52 1028 aa19.22■□□□□ 0.67
SNX27-204ENST00000458013 PRMT3O60678 531 aa19.22■□□□□ 0.67
SNX27-204ENST00000458013 SLC2A2P11168 524 aaPredicted RBP19.22■□□□□ 0.67
SNX27-204ENST00000458013 GAD2Q05329 585 aa19.22■□□□□ 0.67
SNX27-204ENST00000458013 BLMHQ13867 455 aa19.22■□□□□ 0.67
SNX27-204ENST00000458013 TBC1D25Q3MII6 688 aa19.22■□□□□ 0.67
SNX27-204ENST00000458013 IQCCQ4KMZ1 466 aa19.22■□□□□ 0.67
SNX27-204ENST00000458013 PHF19Q5T6S3 580 aa19.22■□□□□ 0.67
SNX27-204ENST00000458013 TXNRD3NBQ6F5E7 133 aa19.22■□□□□ 0.67
SNX27-204ENST00000458013 CHRDL2Q6WN34 429 aa19.22■□□□□ 0.67
SNX27-204ENST00000458013 HSDL2Q6YN16 418 aa19.22■□□□□ 0.67
SNX27-204ENST00000458013 QSOX2Q6ZRP7 698 aa19.22■□□□□ 0.67
SNX27-204ENST00000458013 COL21A1Q96P44 957 aa19.22■□□□□ 0.67
SNX27-204ENST00000458013 COL3A1P02461 1466 aaPredicted RBP19.22■□□□□ 0.67
SNX27-204ENST00000458013 KERAO60938 352 aa19.22■□□□□ 0.67
SNX27-204ENST00000458013 RAP2AP10114 183 aa19.22■□□□□ 0.67
SNX27-204ENST00000458013 GKP32189 559 aa19.22■□□□□ 0.67
SNX27-204ENST00000458013 NPAS4Q8IUM7 802 aa19.22■□□□□ 0.67
SNX27-204ENST00000458013 OR52B2Q96RD2 323 aa19.22■□□□□ 0.67
SNX27-204ENST00000458013 OSBPL7Q9BZF2 842 aa19.22■□□□□ 0.67
SNX27-204ENST00000458013 FARSBQ9NSD9 589 aaKnown RBP19.22■□□□□ 0.67
SNX27-204ENST00000458013 HCN3Q9P1Z3 774 aa19.22■□□□□ 0.67
SNX27-204ENST00000458013 MLXQ9UH92 298 aa19.22■□□□□ 0.67
SNX27-204ENST00000458013 MAFBQ9Y5Q3 323 aaPredicted RBP19.22■□□□□ 0.67
SNX27-204ENST00000458013 FXYD6-FXYD2A0A087WZ82 144 aa19.22■□□□□ 0.67
SNX27-204ENST00000458013 C8AP07357 584 aa19.22■□□□□ 0.67
SNX27-204ENST00000458013 IL1R2P27930 398 aa19.22■□□□□ 0.67
SNX27-204ENST00000458013 L1CAMP32004 1257 aa19.22■□□□□ 0.67
SNX27-204ENST00000458013 CSTF2P33240 577 aaKnown RBP eCLIP19.22■□□□□ 0.67
SNX27-204ENST00000458013 ACVRL1P37023 503 aa19.22■□□□□ 0.67
SNX27-204ENST00000458013 UFM1P61960 85 aa19.22■□□□□ 0.67
SNX27-204ENST00000458013 THOC7Q6I9Y2 204 aaKnown RBP19.22■□□□□ 0.67
SNX27-204ENST00000458013 ANKRD23Q86SG2 305 aa19.22■□□□□ 0.67
SNX27-204ENST00000458013 FXYD6Q9H0Q3 95 aa19.22■□□□□ 0.67
SNX27-204ENST00000458013 TAC3Q9UHF0 121 aa19.22■□□□□ 0.67
SNX27-204ENST00000458013 TLR4O00206 839 aa19.22■□□□□ 0.67
SNX27-204ENST00000458013 TMEM63AO94886 807 aa19.22■□□□□ 0.67
SNX27-204ENST00000458013 RPS3AP61247 264 aaKnown RBP19.22■□□□□ 0.67
SNX27-204ENST00000458013 PHC1P78364 1004 aa19.22■□□□□ 0.67
SNX27-204ENST00000458013 MLLT1Q03111 559 aaPredicted RBP19.22■□□□□ 0.67
SNX27-204ENST00000458013 MFSD5Q6N075 450 aa19.22■□□□□ 0.67
SNX27-204ENST00000458013 TATDN1Q6P1N9 297 aa19.22■□□□□ 0.67
SNX27-204ENST00000458013 ARL9Q6T311 187 aa19.22■□□□□ 0.67
SNX27-204ENST00000458013 CMTR2Q8IYT2 770 aaKnown RBP19.22■□□□□ 0.67
SNX27-204ENST00000458013 OVCA2Q8WZ82 227 aa19.22■□□□□ 0.67
SNX27-204ENST00000458013 IRGQQ8WZA9 623 aa19.22■□□□□ 0.67
SNX27-204ENST00000458013 ROPN1LQ96C74 230 aa19.22■□□□□ 0.67
SNX27-204ENST00000458013 TMEM74Q96NL1 305 aa19.22■□□□□ 0.67
SNX27-204ENST00000458013 POLE4Q9NR33 117 aa19.22■□□□□ 0.67
SNX27-204ENST00000458013 OAZ3Q9UMX2 235 aa19.22■□□□□ 0.67
SNX27-204ENST00000458013 SLC22A14Q9Y267 594 aa19.22■□□□□ 0.67
SNX27-204ENST00000458013 GPIP06744 558 aa19.21■□□□□ 0.67
SNX27-204ENST00000458013 OR3A3P47888 321 aa19.21■□□□□ 0.67
SNX27-204ENST00000458013 OR3A2P47893 321 aa19.21■□□□□ 0.67
SNX27-204ENST00000458013 OC90Q02509 493 aaPredicted RBP19.21■□□□□ 0.67
SNX27-204ENST00000458013 WSCD2Q2TBF2 565 aa19.21■□□□□ 0.67
SNX27-204ENST00000458013 PLEKHG6Q3KR16 790 aa19.21■□□□□ 0.67
SNX27-204ENST00000458013 DCAF12L1Q5VU92 463 aa19.21■□□□□ 0.67
SNX27-204ENST00000458013 KLHL36Q8N4N3 616 aa19.21■□□□□ 0.67
SNX27-204ENST00000458013 TM9SF2Q99805 663 aa19.21■□□□□ 0.67
SNX27-204ENST00000458013 UPB1Q9UBR1 384 aa19.21■□□□□ 0.67
SNX27-204ENST00000458013 NUP50Q9UKX7 468 aa19.21■□□□□ 0.67
SNX27-204ENST00000458013 MEN1O00255 615 aa19.21■□□□□ 0.67
SNX27-204ENST00000458013 MPZL2O60487 215 aa19.21■□□□□ 0.67
SNX27-204ENST00000458013 ACSBG2Q5FVE4 666 aa19.21■□□□□ 0.67
SNX27-204ENST00000458013 CEP97Q8IW35 865 aa19.21■□□□□ 0.67
SNX27-204ENST00000458013 ZNF676Q8N7Q3 588 aa19.21■□□□□ 0.67
SNX27-204ENST00000458013 PLD4Q96BZ4 506 aa19.21■□□□□ 0.67
SNX27-204ENST00000458013 DGAT2Q96PD7 388 aa19.21■□□□□ 0.67
SNX27-204ENST00000458013 MCCC1Q96RQ3 725 aaPredicted RBP19.21■□□□□ 0.67
SNX27-204ENST00000458013 ACBD6Q9BR61 282 aa19.21■□□□□ 0.67
SNX27-204ENST00000458013 LIN28AQ9H9Z2 209 aaKnown RBP19.21■□□□□ 0.67
SNX27-204ENST00000458013 TRPV4Q9HBA0 871 aa19.21■□□□□ 0.67
SNX27-204ENST00000458013 RB1P06400 928 aa19.21■□□□□ 0.67
SNX27-204ENST00000458013 MRPL3P09001 348 aaKnown RBP19.21■□□□□ 0.67
SNX27-204ENST00000458013 UQCRC1P31930 480 aa19.21■□□□□ 0.67
SNX27-204ENST00000458013 IL10RBQ08334 325 aa19.21■□□□□ 0.67
SNX27-204ENST00000458013 BNIP3Q12983 259 aa19.21■□□□□ 0.67
SNX27-204ENST00000458013 RIN1Q13671 783 aa19.21■□□□□ 0.67
SNX27-204ENST00000458013 UGT8Q16880 541 aa19.21■□□□□ 0.67
SNX27-204ENST00000458013 CHADLQ6NUI6 762 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms